BGIOSGA010086

From RiceWiki
Revision as of 09:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010086| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010086, complete gene.| tag = OS03G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010086

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010086, complete gene.

LocusTag

OS03G0669200

Ensembl Transcript ID

BGIOSGA010086-TA

Ensembl Protein ID

BGIOSGA010086-PA

Length

7146

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30357472..30364617

Sequence Coding Region

30364509..30364617,30364284..30364378,30359719..30360143,30358747..30359110,30358026..30358139
,30357472..30357507

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30357472..30364617 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30357472..30364617 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGTGGCGGAGCTCAAGGAGAAGCACGCGGCGGCCACGGCGTCGGTGAACTCCCTGCGGGAGCGGCTCCGTCAGAGGCGGCAGATGCTGCTCGACACCGACGTGGAGAGGTACTCGAGGACGCAGGGGCGGACGCCGGTGAGCTTCAACCCGACGGATCTGGTGTGCTGCCGCACGCTTCAAGGCCACAGCGGAAAGGTATATTCTCTGGATTGGACCCCTGAAAAGAATTGGATAGTCAGTGCCTCACAAGATGGAAGGCTAATTGTATGGAATGCATTAACAAGTCAAAAAACACATGCCATAAAGTTACATTGCCCATGGGTGATGACATGTGCATTTGCACCCAATGGCCAATCTGTTGCCTGTGGTGGTCTTGACAGCGCATGCTCTATCTTCAATCTTAACTCACAAGCAGACAGAGATGGGAATATACCAGTATCAAGAATACTTACCGGACACAAAGGCTATGTTTCATCCTGTCAGTATGTCCCAGATCAGGAAACCCGCCTAATTACTAGCTCTGGTGATCAAACATGTGTCCTGTGGGATGTTACTACTGGCCAAAGGATATCAATATTTGGCGGTGAATTCCCATCAGGGCATACGGCAGATGTTTTGAGCTTGTCCATAAACTCATCAATTTCGAATATGTTTGTTTCGGGTTCATGTGATGCAACTGTAAGGCTGTGGGATATCAGAATTGCAAGCCGGGCAGTTAGAACATATCATGGTCATGAGGGTGACATTAACAGTGTCAAGTTTTTCCCTGATGGCCAGAGGTTTGGTACTGGTTCAGATGATGGAACGTGTAGATTATTTGACGTGAGAACAGGGCACCAACTTCAAGTATACAGTCGGGAACCTGATAGAAATGATAATGAACTCCCAACTGTTACATCTATTGCATTTTCGATATCAGGAAGGCTTCTTTTTGCTGGATACTCCAATGGTGACTGTTATGTGTGGGACACACTTCTCGCTGAGGTGGTACTTAATTTGGGAAACCTCCAAAACTCTCATGAGGGGCGTATAAGCTGCCTTGGTCTTTCTTCTGATGGGAGTGCATTGTGTACAGGAAGTTGGGACAAGAATTTGAAGATTTGGGCCTTCAGCGGACACCGGAAAATAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MASVAELKEKHAAATASVNSLRERLRQRRQMLLDTDVERYSRTQGRTPVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSISNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDVRTGHQLQVYSREPDRNDNELPTVTSIAFSISGRLLFAGYSNGDCYVWDTLLAEVVLNLGNLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRKIV</aaseq>

Gene Sequence

<dnaseqindica>1..109#240..334#4475..4899#5508..5871#6479..6592#7111..7146#ATGGCGTCCGTGGCGGAGCTCAAGGAGAAGCACGCGGCGGCCACGGCGTCGGTGAACTCCCTGCGGGAGCGGCTCCGTCAGAGGCGGCAGATGCTGCTCGACACCGACGGTGAGGTCCCCCCCCACCCAACCCTCCAATCCCCACAGGCGGTTGAGGAGCTCTCGAGGGCTCGGGGTGAATTTAGCGGGGTTTATTTTTTTTGCTGATTGTTTTGGGGTGTGTGTATGTGTATGTGCAGTGGAGAGGTACTCGAGGACGCAGGGGCGGACGCCGGTGAGCTTCAACCCGACGGATCTGGTGTGCTGCCGCACGCTTCAAGGCCACAGCGGAAAGGTTGCTGATCAGTTGACTTTCTGCCTCTCGTATCTCAATTTCGGTACAGCTTTTGCGAATTGGGGTTCGGTCGTACGCTTTTGGAGGTTGAATTGTGGAAGAAGAGATGGATGAAGTACTAGCACTTGTTTGCGATTAGAAATAGTTGCAACTGGTGCTAGACGGGGTGGTAGTGTAAGCCCAGTTAATTTCGAGTGAGTAAGATTCGGTGATTGGGTTGGTACCTCTAGTTAAGAAACTTGACATTAAGTTGAATGCATCATTTTTGGGCAAATATTGATTATTTGGTCTAATTTTGTGTGGATTTTAGCATGTTTTTAATACTGGTCAAGTTGCATTGTTGTAGATTAGAGTTAAATTATCTTGTGTTTAGGAATGTTGGTAGGAGGAACTTGAATTCGAGATGCTATTCAAGAAGAAGAAAGTTAATTAAGCACTTATGTCATATTTGCTGTTTTGCATGCTTTTGTTGCTTTATTTGCCTTATGTTATATAAATGGTAATACAATTAGTTGAACTGTGTGGTGTGTAGCTACTCTCTGGTTTTGAGGAGGTTTGGTACTCCTATTTCTAAATATAAAGCCACCATTTGCCTTGAGGAACAAACTTTGTAAACCTTTATTGGTCCAAGAATGTTTTGGTCTGCTTATCCTTTACTGTGGGAAGCGGAGAAAGTCTTCTTTTATGGAGGTTGCTCTTGTTATAAAGGATAAGGCTCAAGACCTTTGGTTCACAGGAATGAGATGAAGGTGGATAACTAGAGTAACTTTGTTAAATGCTATATTTTGTGTGTAATAATAAAAAACCTGTGTAGGTAGATGCACTTTTGGTTGCTTCCATCCTTAGAATTCCATTCTTTACCTGTGTATTTCATTTTCAATCAGAGCAGGGGTTAGTCCTTTTCCTTCTAAAAAGTGAAATCGCTATGATACTTTACAATATTTAAGCATGTGTTGGCTAATATTTTTTTATAGATGGCATTACATCCTAATCAGATAGTACTACCCATAGACAGAACTAGGTTGAACTAGATTGCAATTTTGACAACCAGTTCATCATTTACCTGTTTAGAATTCTATCGTCCCCTAGAAATGTTGTTTCACTTGTGTCCATTGAATCAACCAGAGTCATATTCTAAAAAAAGTGCCAAAAATAGGTTTTGTTAGAATGTATTCCCCATATAGGCAATACTGTTTTTGTATATTTTATGGAATAAAATTCCACTAGTTGATTTGCAGAAGCAATGTCACAGACAACCATCGCTGGCTGCCTCCCTCCCTTATGCATGGAATGGTAACATGCTTATTGCAAAACTTGGACATGGTTGAGTGATTTGGTATACAAACATTAGTCTCTCCTAGGAGGATAGTTCAGTGTTTATTTCTCCTTTCTAGTCACAGCTGCATGTATTCCCTTTGTTCACTTTTATGCGGCATGGTTTGACTTGTCATGGTCTCAAAGATTGTTACCATTGGTTTCTCTTATAGTATATTGATTTTTTTTATGGTACTCTTAATTACACCTTGGTCCAATGGATGGCATTCATATTACCTCATTGGAGGTAATAGATCGCGTAAAAAGGAAAGAAAAATAAAATCATGAACCTGCAATAAAAATTGTTTGCCAATAAAGTAAGGGACAATTGTGTTTGTACTCCAGCTTTCAATCTGCACTGTGATTTTGCCCTCACTTTTTAGGGTTTGCAAATTTACCCATGTTTTTTCAAAATGAAGTCACCGTTTACCCCTACTATGGATGGAAGTTAGGTGGGTCCCACAATAATGAGCTAAGGAGACATAAAAAAGGGGGAAAAACGATTTTAGAAAAATGAGACTACCATTCTACCCTTGAGCATGTTCAGTCTCCTGTTATCCTCCACCGTTTCCATCAGATCATCCACAAATCCTAGACCTAGAGCATGCGGCAGCGGTCGTGAGCCTGTGCGGAAACACAAGCAGGTGGTGGCTCCTCGGCGCAGTGACGCCAGCAGCAGTTCGCGGCAGCGGCAGCGGCTCTGGCGAGCCTGTGTGGAAATGCGAGCAGGTGGTGGCGGTGGCTCCGGCTAGCCTGTGCGGAAACGCGAGCAGGCAGCAGTTCCTTGACGCGTTGAAGCAAACGGCAGTCCACGGAGGCTCCGGCAAGCAGGCGGCGGTGATTCCTCGGCGCATCGATGCAAGCAGTAGTCTGTTTTTTTATGGCGGCAGTGGCTCCTCGGCAACAAATCCTAATCCTAAGTTGTGGCTTACAGACTCTGCATAACCATGGCTCTGGGCTAGAAGATTGCAGAGTAAACCAACTGAAATCCATGGTCGATTCTTGCCTCTCTTGAGTTCATATGATGCGACTGTCCAGCTGTCCTTCCTCCGTTCCCATGGTTTGTCAGGGTTCGGCAAAGGCCCCATACCAATTTGGCTTGTTTTTGTCTGATTCTCCCACTGAAAATTTCTGTTGTCAAGAACTCTTTATGCTTTAAGAAAATATTCAGAGCAATGCTCTCCGGTCAAAATAGAGTAAAACACGTGTTATAGAAAAGGGACAAATATGCAATAGCAAACGGGGGTATAAATGTCTTTTCGTGCTCCATTTAAACTGACCATCCAAATTAGGGGTAATGCTCTGCTTCGTTTTCAGAAGGAGGGGGGGGGGATGAAAACGCAAACCCTAAAAAACAGGGGCAAAACCACAGTTGGACTCCAAAACAGGGGTAAGAACGTAATAGCCCCATACAGTAAATATTTAATGCATAATTTGGCCTCCCCCCCCCCCAACCCCCACCCACACCACCACCCAAAAAAAACTGAATTACTGTGTTGGTGTTGAATGTAATTCGAATTACTTTTATTTGTCATATTAAATCTTGAGGTTTCAAAAGTCACTTGTTTTTTAAAACCAGCAGCTGTTTGCTTTGTAAAGTATGCAATTTGTTTTGCACATTCCTGGTATGCAGAAAGAATAATTAATTAATTACAGGCATTAATGGTTTCCTCTTCTGCTGTGATTTATTAATTATTAGATGGAATTATATCTATCACTAGATAAAGCAAATATACAAACTAATGGTTAGGATTTGTTGCTTGCTCTTACCACTCTACATGTAAGATGGAGCGTCCTAAAAGACCTCATAATATATATGTTAAACTACAATACGGTGAAATATATGAATATACTTGAATACAAATCTAATGACACCACTATTACATCACTAAACGTACATATAGTCCAACAAAATATCGCTAAATTACATTACATAGTGCATATATGCCATCTAGCAAAGTGTATTCCGTAGCTGCACCAGTTACTTCTTTGTCAGCGCATATTTACAAAACTTCATACTTGAACATGCGAAGACAGTTTCAGGTAGTGTACAATCACTGATTGGACTCGGATCCTCTGTAGCGTGAATACTCCCTCCGTTCTAAAATAGATGCCTTTTAGAATCCAGTGCAGTCAAACCTGGAAATTTTGGTCATGAATGTTCCCCAAAATATTAAAAGGTGTCATGACATTCTAGAATTGTCTTGGAAAATACTTTCAGACCATTATATTTTTAATATTTTTTTATGGACATACGATTAGAAGTAATGGTCAAACATGTAATTGGAGATCGTGTCAGTTTACTAAGCAGAAGTGGAAGAATGCAATTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTTTAATACTCAGCTCAATTCAGGATACTTTTCATCAATTCATTAAAGAACTGGCCTTCTAATGGATCTAGGGTGTATAAGTTAGTGCTCGTAAGGCCGCAACATTGACATATGATCACCGGTTACGGATAGTCCGCATAATCAGGTCAAATAAGCAATATGACCCCTAGGTTGTCAACCAAATGAACACAAAGTCACAAACTACTGATGTTTATAAAGTTGCAATACTAGAAAAATTGGAATGCAAGGAATTTATGATCTGCTGTTGGTTCCAAGTTCCAAGGTCCAACTGTTCTAAGATGCCTTTTTTTTTGTTCTGCTACTTTGCTGTGGCAATTGAACACTTCAAATTCCTCTGTGGTACATTGGTCGGCAAAAATAAATGCTTTTATCAAATGATTTCATGTTTTATGCCTAGCATTAACTCATTAGTCACTGCAGGTATATTCTCTGGATTGGACCCCTGAAAAGAATTGGATAGTCAGTGCCTCACAAGATGGAAGGCTAATTGTATGGAATGCATTAACAAGTCAAAAAACACATGCCATAAAGTTACATTGCCCATGGGTGATGACATGTGCATTTGCACCCAATGGCCAATCTGTTGCCTGTGGTGGTCTTGACAGCGCATGCTCTATCTTCAATCTTAACTCACAAGCAGACAGAGATGGGAATATACCAGTATCAAGAATACTTACCGGACACAAAGGCTATGTTTCATCCTGTCAGTATGTCCCAGATCAGGAAACCCGCCTAATTACTAGCTCTGGTGATCAAACATGTGTCCTGTGGGATGTTACTACTGGCCAAAGGATATCAATATTTGGCGGTGAATTCCCATCAGGGCATACGGCAGATGTTTTGAGGTATTTTTTTTTCTTTCTTGACTTGGTTCATTTGGACATCCTGCTTACTATTGCATAGCATTTAACTGTTCTCCATGCACTGAATTGAAATCCTCTTCTCACATATGACAGCTTCAACTTAAGCTACTGAATGCTAGGTTTCCGTCTTCAGTAATATGTGAATACTGTTAGTGCGATAGATATATCTTGTTTGTTATCACTGTGTTTTGCCCTTGTTCCCTAATTATGTGTCTTAGCTATGTTCACTGCATCAATTAAGTGGTACAAGTTTGCTTGCAAGATATGGCTATAAATAGTATGCCCTCCGTATAAAAATATACAGAGGGAGTATGCAATGTTGTCACATGGTAGCAGATGAAGCATTTGGTCTTAAAAAGGTTTGTGAAACAATTTCATGAATCTAGTTGAGGCACAAAATAGTAATGAATTGGCTTATACACGTGGCATAGAAAACATCTTTGTAATGTAGCAACATGCCTTTTTTTCAAATGAACTGCTGAAAGTGATTTAATTTAATTTGGTTATTGTTTTGAAATATATAAGCTGCTATGGTTCTGTTTGCATAGGTGTTTTTTTTAGTGCTCTAATATATCTACTTTCTGCTGCAGCTTGTCCATAAACTCATCAATTTCGAATATGTTTGTTTCGGGTTCATGTGATGCAACTGTAAGGCTGTGGGATATCAGAATTGCAAGCCGGGCAGTTAGAACATATCATGGTCATGAGGGTGACATTAACAGTGTCAAGTTTTTCCCTGATGGCCAGAGGTTTGGTACTGGTTCAGATGATGGAACGTGTAGATTATTTGACGTGAGAACAGGGCACCAACTTCAAGTATACAGTCGGGAACCTGATAGAAATGATAATGAACTCCCAACTGTTACATCTATTGCATTTTCGATATCAGGAAGGCTTCTTTTTGCTGGATACTCCAATGGTGACTGTTATGTGTGGGACACACTTCTCGCTGAGGTTTGCATCATTGGCCATTTCTCATGAATTTTACTACAGCTTAGATAGTGTGAAAACAGAACCTGAAAACAATATTGACCAAATTACTGTGGACTTTAATATATTACATAGTCATGCTTTCCATTTTTTGAAAAAATATCGCAAATATTGTATTATACCTGTTATATACAACTATACTATTATATTACAGTCAGTTGGAAGATATGCTATTTGAGTTACACGACCTTAACTCTGTCAACAATGTAAACATGCTTGTATGTCGGCATGTTGTAACTTTTCTGGTTTGAAGATAACTACTTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGTCTGCATTCATATAGATGCTAATGAATCTATATATATAATAATGTCTAAATTCATTAGCATCTATATGGATGTGGGCAATACTAGAAAGTCTTACATTGTGAAACAGAGGGAGTAGCTGAATTCGTGCTTGGAGGGTCATTTTCGCCTTGTTTCAATAATGTAACTGATAGGGGGTAGGCTTTGAATATATATATTTCTTCTCTCTTTATATATTGGTTTTACTGTTGTAACTTGTAAAATCGGTTCACTTGTGAATTCTTTTGTTTCTGATAGGTGGTACTTAATTTGGGAAACCTCCAAAACTCTCATGAGGGGCGTATAAGCTGCCTTGGTCTTTCTTCTGATGGGAGTGCATTGTGTACAGGAAGTTGGGACAAGAATTTGAAGGTACGAAAGCTTCTTTTGATAATCAAGTGCATGCCATGAACTGTACTACCTTAACACTGTTAAATTATAATCACGCTGGAATGTAATTATCAGTTGTAAGACCTGCTGTCCTTATTCCAAAATTAATAGCTTGTGAGTTGCTTTTTAGAAACAACAACTAACTTCTGCACTTTGTACTAATTTGACATCCTTACTAACTGAAAATGTTCTTATATCATAGATTAACACTTAATATTAAGATACAGAAGAACACTTTGGTCGGCAATATTTGCTAGTTTATCCGGCCGTTGTGCTGTGTAAGGAAGTCATGCATTTGTTGATTTTGACAACCGTTACCCTTTAGTTGTAGCTTTGCCATGATTAACGTGGTGCTTTTTTATCTCATAAAGATCCCAGCGGAACTTACTGAGTTTTGTGTTTAGCATTTGCCATGTTCTAGAAGTGAAAGCAAAAGAAAATATTTTGGTGCAAACTCCAGCATGTTAACGTTTGAGTTGCTGCTTGTTGAACATTTTCAGATTTGGGCCTTCAGCGGACACCGGAAAATAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010086