BGIOSGA010095

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Revision as of 09:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010095| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010095, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA010095

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010095, complete gene.

LocusTag

OSJNBA0056E06.6

Ensembl Transcript ID

BGIOSGA010095-TA

Ensembl Protein ID

BGIOSGA010095-PA

Length

5190

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30139467..30144656

Sequence Coding Region

30144117..30144656,30143142..30143901,30142495..30142686,30142148..30142373,30140539..30140570
,30139467..30139849

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30139467..30144656 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30139467..30144656 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGTCCACCATAAGCTTCTCCTCCTCGTCGCCGCCGTCCCCTCCGCCGCCGCAGCCGGCTCCGGGCGACATCGACGCCGTCAGCCTCGGCCGCCTCAGCAGGAACCTCGAGAACCTCCTCGACCCCGCCTTTCTCAACTGCGCCGACGCCGAGATCGTCCTCGCCTCCGGAGGCGGCGACCCCGGCGGCGGCGCCGTCGTGGGCGTCCACCGCTGCATCCTCGCCGCCAGGAGCCGCTTCTTCTACGACCACTTCTCCTCCGCCCCCGCCCCCGCCCCCGCCACCGCCGGCGACAAGCCGCAGCTGGACCTCGACGGGCTGGTCCCCGGCGGGCGCCACATCGGCCGAGACGCCCTCGTCGCCGTTCTCAGCTACCTGTACACCGGCCGCCTCAGGTCGGCGCCCCCCGAGGCCGCCGCCTGCCTGGACGACGGCTGCAGCCACGACGCGTGCCGCCCGGCGATCGACTTCGTCGTCGAGTCCACGTACGCCGCCTCCGGCTTCCAGATCTCCGAGCTCGTCTCCCTCTTCCAGCGCCGATTATCTGATTTTGTGAACAAAGCTTTGGCTGAGGACATACTGCCAATTCTTGTGGTTGCCTCCACCTGCCATCTTCCAGAGCTGCTAAATCAATGTATCCAGAGGGTTGCCAACTCGAACCTGGACAATCGTTACCTCGAGAAGCGGCTTCCGGATGATCTGTACGCCAAGCTGAAGGAGTTTCGCGTGCCTGATGAACCACACAGTGGCATTCTTGACCCTGAGCATGAGAAGAGGGTCAGAAACATCCACAAGGCCTTGGATTCCGATGATGTCGATCTTGTTGGCATGCTTCTGAAGGAGTCCCCGGTCACCTTGGATGATGCATTCGCCATACACTATGCTGCGGCCTACTGTGAGCCAAAAGTGTTAGCAGAATTGCTGAAACTGGAATCTGCAAATGTGAACCTGAAGAACTCAAGTGGATACACGCCGCTCCACATGGCTTGCATGAGGCGAGAACCGGATATCATTGTTTCGCTTATAGAAAAGGGGGCCTCTGTTCTGGAAAGGACACAGGATGGACGTGATGCTCTTACCATCTGCAAGAGATTAACAAGGGAGAAAGACCGCAACGAGAAATCAGAAAAATGCAAGGAGAGAAGCAAGGCTTACTTGTGCATTGGCGTCTTACAGCAAGAAATAAAGAGGAGACCACAAATTTTGGAGGACCAGATGTCTGCAGAGGAGTCAATTGCTACACCTCTGCTGGTTGATAATTTTCACATGAGGCTACTAAACTTGGAGAATAGAGTTGCCTTTGCAAGAATATTTTTCCCTTCGGAAGCCAAACTTGTGATGCGCATAGCACAAGCTGACTCAACTCAAGAGTTTGCTGGTCTCACATCTGCTAATTTCAGTAAACTTAAGGAGGTTGACCTAAATGAGACCCCCACAATGCAAAACAGGAGGTTGCGAGAACGCCTTGATGCTTTGACAAAAACAGTTGAACTCGGACGACGATACTTCCCACATTGTTCAGAAGTTCTCGACAAGTTCCTGAATGAAGAATCCACCGATTTGATCTTGCTTGAAAGTGGCACAGCAGAGGACCAGCAAACCAAGAGGATGCGCTTTTCTGAACTCAGAGAGGATGTACGGAAGGCCTTTACCAAAGATAAGGCAGCCGGCGCTGCAATATCTTCCTCAACATCTGCGTCTTCATCACCAAGAAACTACAGTGCATCTCTTTTCATCCATGCATGCGAGAGCGGAGGGGGAGATCGCGTCGCGCGTGAGAGGCGAGGAGGAGATCGCGGCGTGCGGATGCGGAGGGGAATGGGCATGGTCGACGCGACGCACGCGGACGGAAGGAGATGGCTGCTCATCCTAGTCGCGCGCGAGATCGCAACTGATACCGTTGGCGAGGTTATATATCAGACGCAGCGATATACGAAATTGATCGAAGGACACAGTGCTATAGACGCACATAGAGCTCTTCCTCTGTCAGCGCCGGCGGTGTTAGCACTTCACTCAATCAGAGCTCTTCCTCTGTCAGGGCCGGCGACGTTAGCACCTCACTTAATCAGGCAACTGCAGCAAGCAGCAACGATTGGTGACAGGCACAAGCTCTTGTGCAGTGCGTGA</cdnaseq>

Protein Sequence

<aaseq>METSTISFSSSSPPSPPPPQPAPGDIDAVSLGRLSRNLENLLDPAFLNCADAEIVLASGGGDPGGGAVVGVHRCILAARSRFFYDHFSSAPAPAPATAGDKPQLDLDGLVPGGRHIGRDALVAVLSYLYTGRLRSAPPEAAACLDDGCSHDACRPAIDFVVESTYAASGFQISELVSLFQRRLSDFVNKALAEDILPILVVASTCHLPELLNQCIQRVANSNLDNRYLEKRLPDDLYAKLKEFRVPDEPHSGILDPEHEKRVRNIHKALDSDDVDLVGMLLKESPVTLDDAFAIHYAAAYCEPKVLAELLKLESANVNLKNSSGYTPLHMACMRREPDIIVSLIEKGASVLERTQDGRDALTICKRLTREKDRNEKSEKCKERSKAYLCIGVLQQEIKRRPQILEDQMSAEESIATPLLVDNFHMRLLNLENRVAFARIFFPSEAKLVMRIAQADSTQEFAGLTSANFSKLKEVDLNETPTMQNRRLRERLDALTKTVELGRRYFPHCSEVLDKFLNEESTDLILLESGTAEDQQTKRMRFSELREDVRKAFTKDKAAGAAISSSTSASSSPRNYSASLFIHACESGGGDRVARERRGGDRGVRMRRGMGMVDATHADGRRWLLILVAREIATDTVGEVIYQTQRYTKLIEGHSAIDAHRALPLSAPAVLALHSIRALPLSGPATLAPHLIRQLQQAATIGDRHKLLCSA</aaseq>

Gene Sequence

<dnaseqindica>1..540#756..1515#1971..2162#2284..2509#4087..4118#4808..5190#ATGGAGACGTCCACCATAAGCTTCTCCTCCTCGTCGCCGCCGTCCCCTCCGCCGCCGCAGCCGGCTCCGGGCGACATCGACGCCGTCAGCCTCGGCCGCCTCAGCAGGAACCTCGAGAACCTCCTCGACCCCGCCTTTCTCAACTGCGCCGACGCCGAGATCGTCCTCGCCTCCGGAGGCGGCGACCCCGGCGGCGGCGCCGTCGTGGGCGTCCACCGCTGCATCCTCGCCGCCAGGAGCCGCTTCTTCTACGACCACTTCTCCTCCGCCCCCGCCCCCGCCCCCGCCACCGCCGGCGACAAGCCGCAGCTGGACCTCGACGGGCTGGTCCCCGGCGGGCGCCACATCGGCCGAGACGCCCTCGTCGCCGTTCTCAGCTACCTGTACACCGGCCGCCTCAGGTCGGCGCCCCCCGAGGCCGCCGCCTGCCTGGACGACGGCTGCAGCCACGACGCGTGCCGCCCGGCGATCGACTTCGTCGTCGAGTCCACGTACGCCGCCTCCGGCTTCCAGATCTCCGAGCTCGTCTCCCTCTTCCAGGTAATCAACTGTTACCCAAACGTGTTCTCTGCACTCATGATTCACTAGCAACTTCAGTTTCAGAAAATTTTTATTGCTGGATGGTGTTGTAAATTTCCTACAAATTAGCATGTGTTTGCAAACAATTCATCATTTTGTGTTGAATAAGTAGCTGAATAATTACAGACAAAAATAGGACTCCTCTAAGTCCTAACTATGGGGTTCTTATGTCGCAGCGCCGATTATCTGATTTTGTGAACAAAGCTTTGGCTGAGGACATACTGCCAATTCTTGTGGTTGCCTCCACCTGCCATCTTCCAGAGCTGCTAAATCAATGTATCCAGAGGGTTGCCAACTCGAACCTGGACAATCGTTACCTCGAGAAGCGGCTTCCGGATGATCTGTACGCCAAGCTGAAGGAGTTTCGCGTGCCTGATGAACCACACAGTGGCATTCTTGACCCTGAGCATGAGAAGAGGGTCAGAAACATCCACAAGGCCTTGGATTCCGATGATGTCGATCTTGTTGGCATGCTTCTGAAGGAGTCCCCGGTCACCTTGGATGATGCATTCGCCATACACTATGCTGCGGCCTACTGTGAGCCAAAAGTGTTAGCAGAATTGCTGAAACTGGAATCTGCAAATGTGAACCTGAAGAACTCAAGTGGATACACGCCGCTCCACATGGCTTGCATGAGGCGAGAACCGGATATCATTGTTTCGCTTATAGAAAAGGGGGCCTCTGTTCTGGAAAGGACACAGGATGGACGTGATGCTCTTACCATCTGCAAGAGATTAACAAGGGAGAAAGACCGCAACGAGAAATCAGAAAAATGCAAGGAGAGAAGCAAGGCTTACTTGTGCATTGGCGTCTTACAGCAAGAAATAAAGAGGAGACCACAAATTTTGGAGGACCAGATGTCTGCAGAGGAGTCAATTGCTACACCTCTGCTGGTTGATAATTTTCACATGAGGCTACTAAACTTGGAGAATAGAGGTCAGCATATGTTTATCTTGGTTTGTCATTTTGAAGCTACGCTTGTTTGCAACAACTAATAGTTTTTCTTTCCATCTTTTACCATTCATTGATTATATCCTGGAATGTGTTTTGAGAAATTAGTGCTTTTTCCTTGTCTTCAATTTGCAAGCATATGTTCTGATGAGCTTAATTTGTTGCTGTATTCTCATTAACCTCAGTGGGCATAAGTTCTATCGGTACTAATATGCATATATTATCTACATCAAAGACTACTGAATGATTTGTTTCCTTTCTTTCTTTTTTTGTGATAGCAATATGATTCACTAACTTAATATGAAATGCAGCAGAAAAGAAGGAACCTAATTCAGTATCAGTTGGGATTACAATGTTGTAGTTTTTTCGCCTTTCCAGCTAGAGACTAGAATACACAATTCTGAAAATCATTCCTGAAGTATATTTCTGTGTCTATGCAGTTGCCTTTGCAAGAATATTTTTCCCTTCGGAAGCCAAACTTGTGATGCGCATAGCACAAGCTGACTCAACTCAAGAGTTTGCTGGTCTCACATCTGCTAATTTCAGTAAACTTAAGGAGGTTGACCTAAATGAGACCCCCACAATGCAAAACAGGAGGTTGCGAGAACGCCTTGATGCTTTGACAAAAACAGGTCATTTTTAACTCGTAATCGTGCATCTATATGGTTAATATTCTCCGGCATTTTGACAGATTAAGCTTCCAGAGTAACTCCTGTTCTCTGCTGTTACTAAATAAACTCCTGTATGTTCCAGTTGAACTCGGACGACGATACTTCCCACATTGTTCAGAAGTTCTCGACAAGTTCCTGAATGAAGAATCCACCGATTTGATCTTGCTTGAAAGTGGCACAGCAGAGGACCAGCAAACCAAGAGGATGCGCTTTTCTGAACTCAGAGAGGATGTACGGAAGGCCTTTACCAAAGATAAGGCAGCCGGCGCTGCAATATCTTCCTCAACATCTGCGTCTTCATCACCAAGGTATGAGACAAAGTTAAGACCTGGCAACAAGAAAGGGAAGCTATCACGGTAATATCAGCAGTTAAGTCTAATCTGCAGTGTAGCTTCTGAAACATCATCATCTTCACCACCAATGCTTGATATACTTGATATAAAGGGGTAAACAGGGCCTTAGAAAGTGGAAGTTAATTATCATTGGTAATATCAGTAGTTAAGTCCAATCTGTTCAGCATGCTCAACTTCAGGAAAGGTGGAGAAGGAAAGTAGGGAGGTTGCTTTGACAAGTAGGGGTGCAATGGAATTCCAACTATTTATCCAAGAAAAGCAGCGAGCATATCTACTACCAGTACGACTGTAGTGTGATTACTTGTAGTGGCTGTGATCTGACATGACGTACGGCATTGGCTTTTATTATGCTAAGAAGTTGGCAATGGTCAGTTTCACTTTCACAATGATTGTAGCCCTCTTGTATGTTTTAACCAATCAGGCCGTGTTTACTTCACCCTCAACTACCCTAAACTTCCAACTTTCTATCACATCATATCACATAAAAAACTTTCCTACACATATAAACTTTTAATTTTTTTTCCAAACTCTCAACTTTCCCCAAACTTCCAAATTTTTTCAGGAACTAAACACACCCTCAGTTCAGTGCTGGTAGAGTATCATTTTTGGTACGAATTGACTTCCGCTATGTCTGAAAATGTTTATGCGGTAACTTTAGCATTACTATATATATAACCGTATATTTAGTTCCTTTCTTTTCTACTTCCTCTGTTCTTAAAATATATACTAGCTACTTCTAGGCTCTAGCTATACAAATGACAATTGTAATATGGAGAACTTTTGGGACGGAGGTAGTACTATGGAGGGATCAGGGATGTGGCCCTAGTCTATTGCAAGGAAAACTGGAGTAGTAAGAATGTGAGTGTTAAACTGTTGATTTGGGCACTGATATTCTTCCCTTTAAACTGAACCAAATTCAGAATCAGATTAATACGATAATCAATGAATCGATTTTATGCATTTATATAATAAAATGTTTGCTAGTGGGACAAAGCAAAACACTAGACATTTGCATTGCAAAGAAGTCTGTCAGGTTAATAATTAAGGTGGTTTTACTAGTTTGCTCTTCTTACTGGACTAGCAAAATGCGTATGTTTTGCTGTGAGTAAAAGAAAATGTATAATAATATGTCATAGATAGAATATTTTTTAATCAAATATGTTAGTATTACTTTTTTAATATATATATATATAGGTAAATTAATATATATATGGTATCCACTTGATTCAAACAAATATTAGACTATTGCATAATATAGGAAAGTTTTAGAGACTAATTTTGTAAAATTGTAAAAGTAGTAGTGATGGTGGCAGAACCACCACCATCACTATTGTATAGATTGTGAAAATGTGTCCTTGCTAATTTGAAGATACAATAGAGTACATTTGCACTAGAGAAACTACAAAATGTTTTCGGAACAAAAAAACTGTCCATTGTAAGCTGTGTTATCAAAACTAAACTAGTTAAACGGTTTCCTTTCGGGTCTCATCTCCTCAAATGATTGGTGTCACATGCTTGATCTGTGATACTAGAAACTACAGTGCATCTCTTTTCATCCATGCATGTGAGCTATTCTTCCCTGTCCCCACAGCACTCGTGCAGCTCTGCAGGGCAAAGTACTCGGGTTGGCCTGAATCCAATGGATTAGTAGATTCGCCTAAACACTGCGCAGATAGCATCATCATCCGTCCTAGATTACTGTAGCTGCATGCTGACATGGTTCAATCATCAAGGAGAAGATACAGATGGATGGCACAGGATTGATGAGATGGCGACATGGCATAATTGCTAACCTTCCGTTAAAAAAAAGAAGACAAACTTTGGGTTTCCATGTCCAATGTTTGACTGTTTGTTTTATATGAAATTTTTTTATAATTAGTATTTTTATTGTTGTTACATGATAAAACATGATTAATACTTTATGTGTGACTTATCTTTTTAATTTTTTTATAATTTCTTTTAAATAAGACGGACGATCAAACGTTAGACACGAAAACTCAAGGTTTGTCTTTTTTTTTCTGTTTTTTTGGACGGAGGGAATAGTTTCATTCTGTAAGAGCATCTCCAATAGATGACTAAAATTAAACTCCCAAAAATCCTGTATTGGGGACAGCCAAAAACATATTTAGCCTAAAATACACCCTCTTCTCCAAGAGATGACTAAAATTTGGTTCCCAAAATTTTAAAATTTTTCCACATCATCATTAGTGGGCCCTTCCCAACTAATTTTCTACCTGCTCGTTAAAATCACAGGCGAGAGCGGAGGGGGAGATCGCGTCGCGCGTGAGAGGCGAGGAGGAGATCGCGGCGTGCGGATGCGGAGGGGAATGGGCATGGTCGACGCGACGCACGCGGACGGAAGGAGATGGCTGCTCATCCTAGTCGCGCGCGAGATCGCAACTGATACCGTTGGCGAGGTTATATATCAGACGCAGCGATATACGAAATTGATCGAAGGACACAGTGCTATAGACGCACATAGAGCTCTTCCTCTGTCAGCGCCGGCGGTGTTAGCACTTCACTCAATCAGAGCTCTTCCTCTGTCAGGGCCGGCGACGTTAGCACCTCACTTAATCAGGCAACTGCAGCAAGCAGCAACGATTGGTGACAGGCACAAGCTCTTGTGCAGTGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010095