BGIOSGA010103

From RiceWiki
Revision as of 09:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010103| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010103, complete gene.| tag = OsI_128...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010103

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010103, complete gene.

LocusTag

OsI_12896

Ensembl Transcript ID

BGIOSGA010103-TA

Ensembl Protein ID

BGIOSGA010103-PA

Length

2110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29954928..29957037

Sequence Coding Region

29956524..29957037,29956289..29956419,29955651..29955938,29954928..29955557

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29954928..29957037 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29954928..29957037 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCCGAGCCAGAGCAACGATCCTTCTCCTCCTCGCGGCTGTCCTCTTCGCCGCGGCGGCGGCGGCCTCAGGTGAGGATCGCCGCCGCGAGACATCACTGCGGCGCTGCCTGCAGCGGTGCGAGCAGGACCGGCCGCCGTACGAGCGGGCCCGGTGCGTGCAGGAGTGCAAAGACCAGCAACAGCAGCAGCAGGAACGGCGACGAGAGCACGGCGGGCACGACGACGACCGCCGCGACCGCGACCGGCGCGGCGAGGGGTCGTCGGAGGAGGAGGACGAGGGCCGCGAGCGCGGAAGCCGGCGGCGGCCGTACGTGTTCGGCCGGCGCAGCTTCCGGCAAGTCGTCCGCAGCGACCAGGGCTCCGTCAGGCTCCTCCCGCCGTTCCACCAGGCGTCCAGCCTCCTGCGCGGCATCAAGAACTACCGCGTCGCGGTGCTCGAGGCGAACCCGCGCTCCTTCGTCATGCCGACCCACACGGACGCGCACTGCATCTGCTACGTCGCCCAAGGCGAGGGAGTGGTGGCGATCATCGAGAACGGCGAGAAGTGGTCGTACGCCATCCGGCAAGGCGACGTCTTCGTGGCGCCGGCGGGGACGATCAATTACTTGGCCAACACCGACGGCCGGAGGAAGCTGATCATTTCGGAGGAGAAGCTGGAGAAGCTGCTGGGGAAGCAGGACAAGGGGGTGATCATCCGCGCGTCGGAGGAGCAGGTGCGGGAGCTGCGGCGCCACGCGTCGGAGGGCGGCCACGGCCCGCACTGGCCGCTGCCGCCGTTCGGCGAGTCGTCGCGCGGCCCCTTCAACATCCTGGAGCAGAGGCCCAGGTTCGCCAACCGCCACGGCCGCCTCTACGAGGCCGACGCCCGCAGCTTCCACGACCTCGCCGAGCACGACATCCGCGTCGCCGTCGTCAACATCACCGCGGGATCCATGAACGCGCCGTTCTACAACACCCGGTCGGTCAAGGTCGCCTACGTCCTGGACGGCGAGGGGGAGGCCGAGATCGTGTGCCCGCACCTGTCGCGCGGCGGCCGCGGCGGCGAGAGCGAGGAGCGCCGGCGCGAGCGCGGCAAGGGCAAGTGGCGTGAGGAGGAAGAGGAGGAGGAGGAGCAGCAGAAGGGGCAGGAGGAGGAAGAGGAAGAACAAGTCGGCCAGGGGTACGAGACGATCCGTGCGCGGCTGTCGCGCGGCACGGTGTTCGTCGTCCCCTCCGGCCACCCGATCGTGGTGACGTCGTCCCGCGACAGCACCCTCCAGATCGTCTGCTTCGACGTCCACGCCAACAACAACGAGAGGATGTACCTCGCCGGGATGAACAGCGTGCTGAAGAAGCTGGACCCGCAGGCCAAGGAGCTGGCGTTCGCGGCGAGCGCGAGGGAGGTGGACGAGCTGCTCAACGCGCAGCAGGAGTCCGCGTTCCTCGCCGGCCCGGAGAAGAGCGGCCGCCGCGGCGAGGAATCGGAGGACGAAGACCGCCGCCGCCGCCGCAGCCACCGTGGGCGCGGCGACGAGGCGGTGGAGACGCTCCTGAGGATGGCAGCCGCTGCGGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MATRARATILLLLAAVLFAAAAAASGEDRRRETSLRRCLQRCEQDRPPYERARCVQECKDQQQQQQERRREHGGHDDDRRDRDRRGEGSSEEEDEGRERGSRRRPYVFGRRSFRQVVRSDQGSVRLLPPFHQASSLLRGIKNYRVAVLEANPRSFVMPTHTDAHCICYVAQGEGVVAIIENGEKWSYAIRQGDVFVAPAGTINYLANTDGRRKLIISEEKLEKLLGKQDKGVIIRASEEQVRELRRHASEGGHGPHWPLPPFGESSRGPFNILEQRPRFANRHGRLYEADARSFHDLAEHDIRVAVVNITAGSMNAPFYNTRSVKVAYVLDGEGEAEIVCPHLSRGGRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQVGQGYETIRARLSRGTVFVVPSGHPIVVTSSRDSTLQIVCFDVHANNNERMYLAGMNSVLKKLDPQAKELAFAASAREVDELLNAQQESAFLAGPEKSGRRGEESEDEDRRRRRSHRGRGDEAVETLLRMAAAAV</aaseq>

Gene Sequence

<dnaseqindica>1..514#619..749#1100..1387#1481..2110#ATGGCGACCCGAGCCAGAGCAACGATCCTTCTCCTCCTCGCGGCTGTCCTCTTCGCCGCGGCGGCGGCGGCCTCAGGTGAGGATCGCCGCCGCGAGACATCACTGCGGCGCTGCCTGCAGCGGTGCGAGCAGGACCGGCCGCCGTACGAGCGGGCCCGGTGCGTGCAGGAGTGCAAAGACCAGCAACAGCAGCAGCAGGAACGGCGACGAGAGCACGGCGGGCACGACGACGACCGCCGCGACCGCGACCGGCGCGGCGAGGGGTCGTCGGAGGAGGAGGACGAGGGCCGCGAGCGCGGAAGCCGGCGGCGGCCGTACGTGTTCGGCCGGCGCAGCTTCCGGCAAGTCGTCCGCAGCGACCAGGGCTCCGTCAGGCTCCTCCCGCCGTTCCACCAGGCGTCCAGCCTCCTGCGCGGCATCAAGAACTACCGCGTCGCGGTGCTCGAGGCGAACCCGCGCTCCTTCGTCATGCCGACCCACACGGACGCGCACTGCATCTGCTACGTCGCCCAAGGTACGCGCGCTCGCCGCCACGCGCCGCACGGCGCTGCGAGGTTGATTCGGTGATTTGTGTTCGAAGCTGGCGGCTAACTTCGGTTGTTTGATGCCGTGGCGTAGGCGAGGGAGTGGTGGCGATCATCGAGAACGGCGAGAAGTGGTCGTACGCCATCCGGCAAGGCGACGTCTTCGTGGCGCCGGCGGGGACGATCAATTACTTGGCCAACACCGACGGCCGGAGGAAGCTGATCGTTACCAAGATTCTCCATACCATCTCCGTCCCTGGCCAGATCCAGGCACGAACACGATCGATCAAATCACTATTCATAAACTCTAATCAACTCTCTACGCACAAGTAATCAATCAATCAATCAATCAATGTTGCAGTTCTTCTTCGCCCCAGGCGGGAGGAACCCGGAGTCATTCTTGTCGAGCTTCAGCAAGGGCGTGCAGAGAGCTGCTTTCAAGGCACGTAGTAGCATTAATCCGATCAATCTGTCACTTAAGTACTTGATTAACATATTGGTTATACAGCAAGGATAATAAGTTAATAACTAATTAAGTTGATATCGACGTACGAGTTGTGTGGTGCAATGTTTAGATTTCGGAGGAGAAGCTGGAGAAGCTGCTGGGGAAGCAGGACAAGGGGGTGATCATCCGCGCGTCGGAGGAGCAGGTGCGGGAGCTGCGGCGCCACGCGTCGGAGGGCGGCCACGGCCCGCACTGGCCGCTGCCGCCGTTCGGCGAGTCGTCGCGCGGCCCCTTCAACATCCTGGAGCAGAGGCCCAGGTTCGCCAACCGCCACGGCCGCCTCTACGAGGCCGACGCCCGCAGCTTCCACGACCTCGCCGAGCACGACATCCGCGTCGCCGTCGTCAACATCACCGCGGTGCGTTTGCTTCGTCGTCCACGCGCCATGGCGGCGCGTGACCGTGTGTACATTGGACCGATTGGTATATGATTTCGTCTGCGTTGCATGCAGGGATCCATGAACGCGCCGTTCTACAACACCCGGTCGGTCAAGGTCGCCTACGTCCTGGACGGCGAGGGGGAGGCCGAGATCGTGTGCCCGCACCTGTCGCGCGGCGGCCGCGGCGGCGAGAGCGAGGAGCGCCGGCGCGAGCGCGGCAAGGGCAAGTGGCGTGAGGAGGAAGAGGAGGAGGAGGAGCAGCAGAAGGGGCAGGAGGAGGAAGAGGAAGAACAAGTCGGCCAGGGGTACGAGACGATCCGTGCGCGGCTGTCGCGCGGCACGGTGTTCGTCGTCCCCTCCGGCCACCCGATCGTGGTGACGTCGTCCCGCGACAGCACCCTCCAGATCGTCTGCTTCGACGTCCACGCCAACAACAACGAGAGGATGTACCTCGCCGGGATGAACAGCGTGCTGAAGAAGCTGGACCCGCAGGCCAAGGAGCTGGCGTTCGCGGCGAGCGCGAGGGAGGTGGACGAGCTGCTCAACGCGCAGCAGGAGTCCGCGTTCCTCGCCGGCCCGGAGAAGAGCGGCCGCCGCGGCGAGGAATCGGAGGACGAAGACCGCCGCCGCCGCCGCAGCCACCGTGGGCGCGGCGACGAGGCGGTGGAGACGCTCCTGAGGATGGCAGCCGCTGCGGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010103