Os12g0244500

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0244500| Description = Conserved hypothetical protein| Version = NM_001073021.1 GI:115488003 GeneID:4351878| Length = 3977 bp| Definition ...")
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Gene Name

Os12g0244500

Description

Conserved hypothetical protein

Version

NM_001073021.1 GI:115488003 GeneID:4351878

Length

3977 bp

Definition

Oryza sativa Japonica Group Os12g0244500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7999551..8003527

Sequence Coding Region

7999897..8000110,8000195..8000331,8002214..8002263,8003107..8003209

Expression

GEO Profiles:Os12g0244500

Genome Context

<gbrowseImage1> name=NC_008405:7999551..8003527 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7999551..8003527 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccaagttggatccgcccctgctttcaggactgggtcacctaagaagcatgaactgaagtccaaacagaagcttgagaagaagctcagcttctacacaaaagtgaaagatgcagtaacctccctaaatgctacaaagactatctgcaagaaatctaaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgctctctgagttccttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaactgcaaatcgaagcaagctttagtgcaacgggaggctgcccaactgaatgctgtgctgaccaatccgcagttccagctcgacccgtttgcggcgatccatcagcacctgttgtcaacacagccaccctctgcgagaaaggagagcaattccgccaagcaggggaaggaccctaaggacaagaaaagaaagaacaagaagaagaatgcttcatcggcctccgaggcaatggatatctga</cdnaseq>

Protein Sequence

<aaseq>MSQVGSAPAFRTGSPKKHELKSKQKLEKKLSFYTKVKDAVTSLN ATKTICKKSKQRSRQKKLKAYDLSMLSEFLPETDASNLHTEAKLNCKSKQALVQREAA QLNAVLTNPQFQLDPFAAIHQHLLSTQPPSARKESNSAKQGKDPKDKKRKNKKKNASS ASEAMDI</aaseq>

Gene Sequence

<dnaseqindica>3418..3631#3197..3333#1265..1314#319..421#gttgtctcctcctccgctcctttgcgccgccgccaacacacagggcagggcgcgccgatctccatctggcgagcagagaaggggaggggaggggaggggatcctggtgagccctctttccgattcatctctcaccgggacctggaatttgcttgcgttcgttaaccctactagcttctcttctagatctggaagaagctcttctcctcctccttattaatttgagagccttaaacctctcttaatacaactagctagtaacattttgtttgtttgtttgtttgttcaccgaatagtttgggggttcaactgaaccaccatgtcccaagttggatccgcccctgctttcaggactgggtcacctaagaagcatgaactgaagtccaaacagaagcttgagaagaagctcagcttctacacaagtaggtgtgcctttccattattttttggctgtactcccttattccaggaaaaatcaacatttgcaatctttggctagtaattgaactaacaatgtatatgtttaatgtcatgcatgtggtatttcgtatacaacggtacctttgtaattgctgataatatgttgtaagataatttaatttccaaaatacaatgttggagaacatgtaaaaaaactgataggccttatattttggatggagggagtgtataaggcaaatgttgattaatgtatagagattgattcaaaagaccagaggatggtggtattggcttgttatgttttacttcactgctattctgaaatgcttgttattcatttttgtaaagaaggacaactaattattagtttattccaagaaaattaatatgtctgtaaaaggggcaatgcttttttttttcttgaatagtgaaagcttggaaatatcttatccatgaataaaaatacttcttcgttcatgttccatgcttgttgtttttagtgttttgtgataataaaacctcttttgttttctataaatagttgtagcctttttagtataccttttattttgtagattacttgtgtttacagaacatgtatattgtaaagtagatagtagcttagtttgtggtactgcactcgaaagtcgaaacattgatagattacgatttatgattgggcttactgctagctggactctgtttcattttcctacctttttcttgtctaccttgagtcgttgactatattttgcggaatagcatgtttttttgtttactgtggtttatagtataattgatttatttttgtttttgtttctcagaagtgaaagatgcagtaacctccctaaatgctacaaagactatctgcaaggtgcttatagaccctctcgtttattattatagtgttctttaattctcttcagcattgcaaatttgtgtgttcctcgtacacaaacattgaatactatcttgcccaaaaaatggatttttgacaattcgaactacctagtatcatgtcctgtcgtttctgtttctattgacttaatacaccagttttgcatgctagatctcaattcgtaatcccatattttttaggttacactcagaactgaaatatctatgcttcatgactgattactgtgcacagttccccaattaacctctgtgtggcatttgtaggttgtagctaagaaagaaataggacctcccggatactaatagtaaataatttctgcaagactgggtttttaaatagtgtgggtgcactcttcagctagtctcttgctaggtggaatttacctcttaaggaatgtgctctgcacatccaacccatccagtactgagcagaaccaggcactttctggcaaaacttatttgaacaaaaagttcctctaatagcacgagacgaaaaattgcttgtctaggttccagttcactatagcgggtatggctattgcaagaaaaccaagcactggttactactcactggtttttgtcatgtttgtaaccctggtataatgtaatgcatcactagcacaagccacaaaaagtttagcaaagaaatcaggagctattctctgtttttaacatggccttgatgaccataacctttgaatccttctcaacacagccaacacctagctaaggggaatcaattacactatgcaataatattaagcatattgtcctccttatggccttatttgttcactaattgaaccaaaaaatattatggagcgttcatctaataaacctgctgaacaaatccaaactaggggtgttggtgtccaccatacgtgaactagaccagctgtttcttgttcacatgacagctgtaaagtataaacagaaacaagccatgccctggcaaaaaatatctacatgcctctagcttgaatcagacttcagcagattctatgggtgtatggcttttcacctttggttgcaattgaatattttctgtagcttctgttgttgcagcttgtttttactgttattgttttgctccatgagtggcgtgggcgtataacgcaaccaatgcttagatatttcaaggataaattccaaattgtatgtattggtcaagtatatatttgtaagtctgattttctcaatcgctagctatgtttagtctcttgtcctgtgtatttgtggtatgctaaaaattatctgcgtaagaaagtattatattgtcatccaaatgcttgtctacatgtgaagactagcaaaataaccacaccatatccataaacagatatgagaatggattttgtacttgggacctgcttggaaccctaatatgctttttgtacttgcactgatgatccactgtctcctgtattccctcctactgtgatgggatgactaggatcctaggaaacccatacgtgcctaactccatatggaaaaacaaatgccaagaccagttggctcttgactcatgaatttcccaacatatagttacaatcttgtggtttcatatattctagacacaaactgcgaacattaattctgttcatttcatatgttaatgcatctatattttagagtaaatatacttgtagatgctgaaatgagacctttagtctctccgttctgttcttggcctttaatctctccacactgtccttccttacaactgattctttttattgcagctgggctactccatttgtagttttctggaagttacacttgctttactttgcactatcagtgttatgggttgtgattatttaaatttctttgtgcagaaatctaaacagaggagccgccagaagaaactgaaagcatatgatctctcaatgctctctgagttccttcctgaaacagatgcctcaaatctgcacaccgaagcaaaactgaactgcaaatcgaagcaagctttagtgtaattgcctcatctgcccctccacttgcgttctttgctttctttccacttatggtttttgactggctttgtctctcctttcaggcaacgggaggctgcccaactgaatgctgtgctgaccaatccgcagttccagctcgacccgtttgcggcgatccatcagcacctgttgtcaacacagccaccctctgcgagaaaggagagcaattccgccaagcaggggaaggaccctaaggacaagaaaagaaagaacaagaagaagaatgcttcatcggcctccgaggcaatggatatctgatatggcaaagtaccctaccaaaggaatggggcgcaattatcgtcaacctcagtttgaaatcgtgtgatctcttaaaccttgtcaaattctgtttcagcatcggcactctcctcccagaggtgtgaggttgggtcaaattttgtttcagcgtcggctctcctcaggttttttttttgacggaaaaacagttggagaggctcctactgcaatatattacttgagtgtacaagagactttacctcctcccagcgaactgcttgtagcgtggctgaagtttctttgtgctgatttgtacatatgatgtttatgatgttttggttaattgttcatgtacctggttctcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0244500, RefSeq:Os12g0244500