BGIOSGA010114

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Revision as of 09:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010114| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010114, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA010114

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010114, complete gene.

LocusTag

OSJNBB0047K21.1

Ensembl Transcript ID

BGIOSGA010114-TA

Ensembl Protein ID

BGIOSGA010114-PA

Length

4712

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29688360..29693071

Sequence Coding Region

29692885..29693071,29691335..29691431,29691072..29691212,29690927..29690985,29690241..29690630
,29689035..29689776,29688360..29688837

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29688360..29693071 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29688360..29693071 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCCGTGCCCCATTCTTTTGTCTCTGTTTCTGAACTCAAGCAGCTCATCTTGACGAGCGACAAACATGGCCGTGGCCGCACCCGTGGCCGCGGCCCCAGAGAAGATATTGTCCTCTCCAACGCCCAGACCGGCGAAGAATTTCTAGATGAAAATGCCATGATACCGCAGAACTCGACTGTGTTGGTCCGCCGAACTTCTGGGCAACAATCAGAGAAAATCGTCTTGTTCTCCTCGCGGGAAGTTATAGAAGATGGTGCTATAGCTTCAAACAAGTCAGAGATTACTGAATCAACCTCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATTGATGCAGCTGAACTCAAATGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGGTTTACGTCAGGACGTTATGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTATGTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAGACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCATTGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCAGAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTGAGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCAGATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGCATTCGTGATTACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATTCCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATCACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCAAGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCTGCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTGACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAGAAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCGGCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAGCGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGCATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGATCCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGTGTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCAAATACTCACTGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGTCCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAGCGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCAAGCTCTGACAGGAGGGACCATAGGCGCTCCATTGATTACGTCGAGGATCACCGCTCTAGTGATTACGCCGAGGATCACCGCAGCAGCAAGAGAATGCGCGCGTCTTCTCCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAG</cdnaseq>

Protein Sequence

<aaseq>MGVVYYKYKSSKETISVPVPHSFVSVSELKQLILTSDKHGRGRTRGRGPREDIVLSNAQTGEEFLDENAMIPQNSTVLVRRTSGQQSEKIVLFSSREVIEDGAIASNKSEITESTSKSCSSTEVQDEDAAIASIIDAAELKWEDKPSKRGQTGGRFTSGRYGHGPVEGETPPPGYVCRSCGVPGHFIQHCQQERKTPPSGYVCYRCRIPGHFIHHCPTIGDPKFDDYKKPHTLVPEVSACPIDGIPSALAPAASVSVVDDLPAELHCRLCNKVMADAVLTSKCCFDSFCDKCIRDYIITQSKCICGVKVLADDLIPNQTLRSTISNMLATRASSITSGTGKHRSSSGSNVDPNSASQTPSAALEKQSKDHHISSAAPDAGLQVATEHVSHLEHKLTTGVDLEVKDEGNSAGILVEKIVPTADARLKDVTDSTSKPATISGTMEPKASKTDQLKKKRKKADSTKIVHPNNANYGYSIPFDPAYCNPYVSGYPWLTDPYMYGPAGMPYGGYPMGPYGVNSIGNMPLQFPSAMQGNLANTHCWETQSMIHWANEDAARPRLAAKPKEPEPANQSRSSERNQRLSSSHGTDPSYKTSRSSSDRRDHRRSIDYVEDHRSSDYAEDHRSSKRMRASSPSPTGGDRHSRARSRYSSRKLTYEDSSPTGGDRHSRARSSHSSRSLTYEDSSDDERNFKRRWGGKR</aaseq>

Gene Sequence

<dnaseqindica>1..187#1641..1737#1860..2000#2087..2145#2442..2831#3296..4037#4235..4712#ATGGGTGTTGTGTATTACAAATATAAGAGTTCAAAGGAAACTATTTCTGTGCCCGTGCCCCATTCTTTTGTCTCTGTTTCTGAACTCAAGCAGCTCATCTTGACGAGCGACAAACATGGCCGTGGCCGCACCCGTGGCCGCGGCCCCAGAGAAGATATTGTCCTCTCCAACGCCCAGACCGGCGAAGGTAGTTAACTATCTGTACAACGCATTCGTTTATCCGTAACCGCATCAGTTTCCTGTTAATTGGCTTGAATCACTGAAACAAATCATTGTATGATCACAAAGCTGGGAATTGGATAATACTTGGAATAGTATTTTTTTTCTTTTGTCCATATGGATTATCTTTTTAGCCTGTAGGATAATATTGGTTCATGATTTTACCAATTAGGACTGAGTCAGGGCATTGTACCCAGCATTTCTTCTCAATGAAGAATGCTGGCATATTAGCGCCTCTGTCGATTATTAATTCTTGCTGTAACCTTTAGGAAAGCTTAAGATACATCATAAGTAATAACAATTTTGCCCATTAGCTATTATTCTGCGTGCATCCAAGTTCCCAATATTTTGCTGATGTGAAACAAACTTATTTTATATATCCTACTCAATGTAACTATCTAAGTTTAACTAGGTCAAGTGTTGGGCAAAGTGTCAATCCGATTATTAGTAACTAGTAATTATTGTAAGGTGATCAGAATTAGGAATTGAACGTTCTTGCAAGATATGAATTAGGAATCTAGATATGTGTTAGTTCTATTAGGCACTCCTATGTGTTGATCATATTCTGTTGTTCGGTTGATCTGAATGCAATATTGGGACTCATACCAATGCTATTCAGATGTTTTTAATGATCTTTATGCTTTGTCAATATAATGATATTAAGTGTAAGCTCATTTCAGTCTGCGCATGTTCGACATGCCTAAATATGTTATTACAACCCTGATTATTATTTTCCCCCATTTCATGAATTCTTATTAGATGGTTTTATTATGTTTCTTCCTATGTTGTTGTTGAAATGTTCCAGTAATGGCATTGGCTATCAGTTTTGCGTGTCACTGATTCCCATCTGATGGTCAATGTTTCTGTATCCCTGTGACATCCTAATTTGTATTTTAGAGAGGATGAAATCCTGTTTTGTGATTGTAATGGAGGTCCATTTTACGTGCTTAAGATACTGTACTCGGACACAGGTGTTAGCACATTATTATTGCAGTGGAAGATGGCCTCATCTTTTCGCCAGTTGACGAGATATGTCCATATAAGTTTTTTTTTTCAGTGAGCTTGTTCCTGGATGAGAAGTTTTGCCATATCACTTTCCTTTCTTTTTTTTTTTTGTACATCTTGTCCAGTAATCCTTGTGGAAGGTTTGTACTTGCAAATTGTACTTCCACCATCCCGTCTTCTTTTGCCATCCTGTACGTGAACCCAGATTTCACAAGGATTACACCTCAGTTGTTCCCACAAAATTCCCAGTTTTGTGATCTATTACTAAAATATTCTTTAATTTCATCTGGACAGTTCAGTTTTGTTGTTTAAGCGCATCTTGTACATGAGAAGACTTCGTTTCACCAATAAAAGGAGTATTGTTTGAGTGCAATGCTTTTGACATTTCTGTTTTCTGTGTTTGTTTCTCAAAACAGAATTTCTAGATGAAAATGCCATGATACCGCAGAACTCGACTGTGTTGGTCCGCCGAACTTCTGGGCAACAATCAGAGAAAATCGTCTTGTTCTCCTCGTATGTCTTCTCCACAATCTTTTATTTGAGATTTTACTTCAAGTGCTTGGATTGAATCTGAATCAGCTGAGGAGAGGTTTGTTTGTATATACTAATACTTGGCATTGTGGGCTTAATTGCAGGCGGGAAGTTATAGAAGATGGTGCTATAGCTTCAAACAAGTCAGAGATTACTGAATCAACCTCAAAATCTTGTTCCTCTACAGAAGTACAGGATGAGGATGCTGCAATCGCATCTATAATTGATGCAGCTGAACTCAAATGGTTAGTGCATCTTATTTTCTTTCCTCACAGGTATCAATTTTTTCTGGCACCTTCCTAATGACAGCCTTGTATCTTGGTGCATGCAGGGAAGACAAGCCATCTAAAAGAGGACAGACTGGTGGAAGGTTTACGTCAGGACGTTATGGTAATGCTGGAATCCTCTTTGGTTCAGATTTATGTTCTGTTGTCCCAGTTATGATTATGATATGGACACTAAGTTGGTTAAAAAATGGAAAAAATCATGGTTGTTGATTTGTTATGAGACAAATGGTCATGCACATTGTAATGGCATTTTTCACTTGAACTTATCATTGGTTAAGCTAGACAGTTCCTCACCATTTTCTGATGCCAGAACTCTAATGATTTGCTTTGTATTGTTGTTATGTAAATTATATGATTGCGCTGCATTTGTTTTGACATATCTATCTATTATAACTGAAGGTCATGGACCGGTCGAAGGGGAGACACCTCCACCAGGCTATGTGTGCCGCAGCTGTGGAGTTCCAGGCCATTTCATTCAACATTGCCAACAGGAGAGAAAGACACCTCCATCTGGCTATGTCTGCTACAGATGCCGAATTCCAGGGCATTTTATTCACCATTGCCCGACCATTGGTGATCCCAAATTTGACGATTACAAGAAGCCCCATACTCTTGTGCCAGAAGTATCTGCATGTCCTATTGATGGCATTCCATCAGCTCTTGCCCCAGCTGCATCTGTGAGTGTTGTTGACGACTTGCCAGCTGAGCTCCATTGCCGGCTATGTAATAAAGTGATGGCAGATGCGGTGTTGACAAGCAAGTGCTGCTTCGACAGTTTCTGTGATAAATGTGAGTAAATTCTGTATTTCTCCTTAACTCTTTGCTGTGGATATGAACAATGTCATTACTTTGATATTCGAAATGTGGCTAGTCATGCTTCAAATTAGTCACAGAAGCATGTTGTTTTGGACATTGACGTGGTATTTGACAGGAAAAATTACGAATAGTTATTGTTGTACGACCTCCATCCTTCAATATATGATGTTGGTTAGTTCAAAATTGAACTAAACAACATCATACATAAAAGAACAGAGGGAGTACTATATTTGTAAAACTCGATAAAATTATAGCACTGTTAAGTACTTTCCAAGACAAATATAAACATTTAGTAATTTACCAATACTCAAAACTTTGTCTAAATACATGCTTAAACATGTTTTCAACGGTAATAGTTTAATAACAGCGGTCTCTGTGATAGCATTTCCTGCCTGTCCTCAACTGCATAGCTAATAACTGTGTTGTTCTTCTCTCAGGCATTCGTGATTACATCATTACACAATCCAAGTGCATTTGTGGAGTCAAGGTTCTTGCAGATGACCTGATTCCCAACCAAACACTTCGGAGCACAATCAGCAATATGCTGGCAACAAGGGCTAGCAGCATCACTAGTGGTACAGGGAAGCACAGGAGCTCTTCAGGCAGCAACGTGGATCCTAATTCAGCAAGCCAAACTCCTTCAGCTGCCTTGGAAAAGCAATCTAAGGATCACCACATATCATCAGCTGCTCCTGATGCTGGCCTCCAAGTTGCTACAGAACATGTTAGCCATCTTGAGCATAAATTGACAACAGGTGTTGATCTCGAAGTGAAAGATGAAGGCAATTCTGCAGGGATATTGGTAGAGAAGATTGTACCAACTGCTGATGCCAGATTAAAAGATGTAACTGACTCCACTTCAAAGCCGGCCACTATTTCAGGAACCATGGAACCCAAAGCTTCCAAGACTGATCAATTGAAGAAGAAGCGCAAGAAGGCAGATTCAACTAAAATTGTTCATCCTAACAATGCTAACTATGGTTACAGCATTCCATTTGACCCTGCGTATTGCAACCCTTACGTCAGTGGGTATCCTTGGTTAACCGATCCTTACATGTACGGCCCAGCGGGCATGCCTTATGGTGGCTATCCGATGGGCCCTTATGGTGTCAATTCCATCGGCAACATGCCACTGCAATTTCCATCAGCAATGCAAGGCAATTTGGCAAATACTCACTGGTATGTATGTTATCAGACTTGTTATCTCACCAGTACTAATAGTAAAATGACGACAAAATTAACTAATAGAACAATTTGGTCAAGAGATTCTTAGAAAGGTTGCATTTTAATTTCCCTATATTACACTTGGCTGTCAGTCATGTAGAACCCCTCTTTCCATTTCAACACTTAACAGTTCGTTTATTCGTCATCTTCAGCTGGGAAACTCAATCTATGATTCACTGGGCAAACGAAGACGCTGCACGTCCAAGGCTGGCGGCGAAGCCCAAAGAACCTGAACCTGCCAATCAGTCTCGATCATCAGAGCGTAACCAGCGTCTGAGCTCTTCTCATGGCACCGATCCCAGTTACAAGACCAGCAGGTCAAGCTCTGACAGGAGGGACCATAGGCGCTCCATTGATTACGTCGAGGATCACCGCTCTAGTGATTACGCCGAGGATCACCGCAGCAGCAAGAGAATGCGCGCGTCTTCTCCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGGTACAGTTCCAGGAAGCTTACTTACGAGGATTCATCTCCAACCGGTGGTGACAGGCACAGCAGAGCGAGGTCCAGTCACAGTTCCAGGAGCCTTACTTACGAGGATTCAAGCGATGATGAGCGCAACTTCAAGAGGAGATGGGGAGGCAAAAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010114