BGIOSGA010157

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Revision as of 09:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010157| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010157, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA010157

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010157, complete gene.

LocusTag

OSJNBA0038E17.11

Ensembl Transcript ID

BGIOSGA010157-TA

Ensembl Protein ID

BGIOSGA010157-PA

Length

6095

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28653679..28659773

Sequence Coding Region

28659711..28659773,28659076..28659240,28658883..28658988,28658322..28658389,28657848..28657957
,28657360..28657438,28656423..28656679,28656008..28656165,28653679..28654946

Genome Context

<gbrowseImage1> name=IndicaChromosome03:28653679..28659773 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:28653679..28659773 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATTTCAAGGGTCTCATATCCATACTTGGTTGAGCATTTGGAAGGAACAGAATCACAGCTACTGTTTTTTTACAACGTTGCAGCAAGATTCCCCTACTTAGTGAAATATAAGCTAGAGGAAGGTGATGAAGCTTCCCAAGTTGCTCAACTCGATTGGAGAATAATTGAGGGTGATATTGAAAAACCATTTATATCATCGGGGCTAGAGTTTGTGCCCTTGCCAGTCATGCATGGAGAGGGTTATGTTTGTTTAGGCTTCCTATTTGGGAGGAAAGCGAGAATTGCATATTTATCCGACATCTTGAGATTTTTACCTAAAACTGAGCATGCCATTTCAAAGTCTGGTGCTGGGCAACTTGATCTTCTTATACTAGAAGCTAACAGTTTGCATGGGGAGGCTCTTGATGCTGTGAAGAGGATAAGCCCTAAGAGAGCTTTGCTGACTGGAATGGCACATGAGATCGAATACTACAAAGAAAATCAGAAGCTGGCAGAATGGTCTAGCAGACTTTGGAAGCTAGTAGTAAATGTGAATGATTCAAACCACGCATTCTGTAAAAAGGAGAAAAGAATGATGGATGCAAAGATCACACCAACCGAGCACAAAATCTTCCCCATTCCGCAGCAAAAGAGCAGCAAAGAGTTTATCAAGCCAGCGATGGAGCCTCCCGCCGGAGACGCTGCTCTGCCGCCGCCGCCGCCGTCGTCGTCGGTCATCTTCCTGGGCACCGGCTGCTCCGGCGCGCTCCCCGACACGCGGTGCCTCCTCAGGCCGTCCGCGCCGCCGTGCGCCGTCTGCTCCCTGGGCGTCTCGCTCCCACCGGAGCAAAACCCCAATTACAGACAGGGTGGCCAATACGAGGATGTATACCCATGCAAGCACGGTATCTGCATCAATACACCAGGAAGCTACCGCTGCAAATGCAAGACAGGAACAAAACCAGATGGCACAAATTTCGGATGCCAACAAGTGCTCCCCATGGCTGCCAAAGTGATCATAGGGCTGAGTGCCTGTTCCATCTTCGTCATGGCTCTGTCATGCTTGCTAGTAATCCAACTCCAGAGAAGGCGGCACATCATCGAGAAGCAGGAGTACTTCAGGCGAAACGGAGGCCTGAGGCTGTACGACGAGATGGTGTCGAGGCAGGTCGACACGGTGCGCGTCCTCACCGTCGACGAGCTCAAGAAAGCCACCGACAACTTCAGCGACGCCCGCGTCCTCGGCCGCGGCGGCCACGGCACGGTCTACCGGGGCACGCTCGACGATCTCCGGGAGGTCGCCATCAAGAGGTCCAAGGCGGCGGTCGACGACGGCGGCGGCGACGGCGGCGGCGGCGGCGGCTGCAAGGAGGAGTTCGTCAACGAGATCATCGTGCTGTCGCAGATCAACCACCGCCACGTCGTGCGGCTGCTCGGCTGCTGCCTGGAGGTGCACGTCCCGATGCTGGTGTACGAGTTCGTCCCCAATGGCACCCTGTTCGAGCTCCTCCACGGCGGCGGCGGCGGGGCAGCGCGGCGGCGGCGGCCGGTGTCGCTGGGCCTCCGGCTGAAGATCGCGGCGCAGTCCGCGGAGGCGCTGGCGTACCTGCACTCGTCGGCGTCGCGCGCGATCCTCCACGGCGACGTCAAGTCCCTCAACATCCTGCTCGACGGCGCGCTCGACGCCAAGGTCGCCGACTTCGGCGCGTCGGCGCTGAGGTCCATGGGCGAGGGCGAGTTCATCGAGTTCGTGCAGGGCACCCTGGGTTACCTGGACCCGGAGAGCTTCGTGAGCCGGGAGCTCACCGACAAGAGCGACGTGTACAGCTTCGGCATCGTCCTCGCGGAGCTCATCACCCGCAAGAAGGCGGTGTACGACGACGGCGGCGGCGGTGGCTCCGGCGAGAAGCGGTCGCTGTCGTCCACGTTCCTCGCGGCCTCCAGCCGGGGCGAGCTCTGGAGAGTGGTGGACCGCGACATCATGGACGGCGACGGCGACGCCGACGCCGCCGTGGTCCGGGAGCTCGCCCGGGTCGCCGAGGAGTGCATGGGAGCGAGAGGCGAGGAGAGGCCGGCGATGAAGGAGGTGGCGGAGCGGCTGCAGGTGCTGAGGAGGGTGGAGATGCAAGCGGCGGCCGCAGGTGTTGAGGTGGTGGATGGCTTCAATGGAGGAGGATTAGTTGGGCGGCATGGGCATCTGGATACGACGATGACGACGACGACGACGTCTTATTACCAGAGCATGGAGACGGACAAGCTGCAGCTGGATGTTGATGACCTTGTACGCTAG</cdnaseq>

Protein Sequence

<aaseq>MEISRVSYPYLVEHLEGTESQLLFFYNVAARFPYLVKYKLEEGDEASQVAQLDWRIIEGDIEKPFISSGLEFVPLPVMHGEGYVCLGFLFGRKARIAYLSDILRFLPKTEHAISKSGAGQLDLLILEANSLHGEALDAVKRISPKRALLTGMAHEIEYYKENQKLAEWSSRLWKLVVNVNDSNHAFCKKEKRMMDAKITPTEHKIFPIPQQKSSKEFIKPAMEPPAGDAALPPPPPSSSVIFLGTGCSGALPDTRCLLRPSAPPCAVCSLGVSLPPEQNPNYRQGGQYEDVYPCKHGICINTPGSYRCKCKTGTKPDGTNFGCQQVLPMAAKVIIGLSACSIFVMALSCLLVIQLQRRRHIIEKQEYFRRNGGLRLYDEMVSRQVDTVRVLTVDELKKATDNFSDARVLGRGGHGTVYRGTLDDLREVAIKRSKAAVDDGGGDGGGGGGCKEEFVNEIIVLSQINHRHVVRLLGCCLEVHVPMLVYEFVPNGTLFELLHGGGGGAARRRRPVSLGLRLKIAAQSAEALAYLHSSASRAILHGDVKSLNILLDGALDAKVADFGASALRSMGEGEFIEFVQGTLGYLDPESFVSRELTDKSDVYSFGIVLAELITRKKAVYDDGGGGGSGEKRSLSSTFLAASSRGELWRVVDRDIMDGDGDADAAVVRELARVAEECMGARGEERPAMKEVAERLQVLRRVEMQAAAAGVEVVDGFNGGGLVGRHGHLDTTMTTTTTSYYQSMETDKLQLDVDDLVR</aaseq>

Gene Sequence

<dnaseqindica>1..63#534..698#786..891#1385..1452#1817..1926#2336..2414#3095..3351#3609..3766#4828..6095#ATGGAGATTTCAAGGGTCTCATATCCATACTTGGTTGAGCATTTGGAAGGAACAGAATCACAGGTTTTCAAGGAAAATACTTGAACTTCGAGGAAGCGGTCTCTGGGAGGGATGCCATGTAGGATCCAGGGTGATCTAGAGCAGAGGGAAAGGAGAGAAGGTGGTCATCTGTTTGTCATCTTATAGGTAGCATTATACAATATATACCGTTACATGGATTGTATATAAAATCAAATAACTAATTTATAAATTCACTATGTTGATGGCGTTTGGATGATGATCAATCCTTATAGATGTCATGACTAATAAGGCCCTGTGCAGTGCAGATTATTCTTACTCACGAACACGCGGATGCTATCCTAGGTCTTGACGATGTTTGGATGATTCGACCAAGTGATGGAAGAAATGATTTTGGCCAAGTTCCTGTTTTCCTCACACAATTCACAATGGACAGGTCATTCTTGCGCCCCAAATATGTTAACGAGATAATATCATATTTTTTATCATTACCGTGTATTATCACATAACATCAGCTACTGTTTTTTTACAACGTTGCAGCAAGATTCCCCTACTTAGTGAAATATAAGCTAGAGGAAGGTGATGAAGCTTCCCAAGTTGCTCAACTCGATTGGAGAATAATTGAGGGTGATATTGAAAAACCATTTATATCATCGGGGCTAGAGTTTGTGCCCTTGCCAGTGAGAGCCACTGTTGTGAATTGATGCACTGCTTTGGTTTCTCTATGTGTTGTCTTTGAAGTCGCTAGCGTGCTATTCCCTTTTCAGGTCATGCATGGAGAGGGTTATGTTTGTTTAGGCTTCCTATTTGGGAGGAAAGCGAGAATTGCATATTTATCCGACATCTTGAGATTTTTACCTAAAACTGAGCATGGTATGATTTTTCTGACATCAATAGTTCTTCAAATAGTAAAATGCTTGTTTTTGTTTAAAGAAATGATCTTTATCAAACATATTATGTCACTATCTTTGAGGGTCGTTTGTGTGATCATCAAAATATATCAGAATACTGAATATCAAGATAATTTGCAGGTTGTTTCTATTCTTCCTAAACCAACTTCTCAATTTTTGTCAGCTCAATAGATTTCATATGTTTTTGCAATTGGCAACATTTAACTATGTCCGGCAGCAAAATTATCTTAAATCTTTAAAGGATTTGTTGTTATTTAAGCTTATCAAATTTAGTAATATCTGTATCAATATTTTTTTTTGGCGATGAACTATAATCACATCGGCGATGAACTAGCATTAACATGACTAAAAATCACATGTAATCTGTAGATATTCTTTTGTAGTTGGGCTGTATTGAATCCTATTTGATTGTTCCAATTTTACTGGAGAATAGAGGATGCCATTTTTTCATGCAGCCATTTCAAAGTCTGGTGCTGGGCAACTTGATCTTCTTATACTAGAAGCTAACAGTTTGCATGGGGAGGTAGGTCTGTGCCACATGATTGTCATTTGAAACAGCATAATTTGATATCCTTTCACACATATCTGCCGATAATCTGGTATACACTTTACCCTCTGTGAACAGGGAGGTGCTCGTAGTAACCATCTTCCTCTGAATGAGGTTGAATTTGTTAAGACCTTTTAAATATTTTTCTGATTTTTTTTTTGCAGTAACTAGGTAGATAATTTGTTGACATACAATCTGCCTGCTCTCCATGAAAGCACCCTACAGAACAGGATAGCTCAAACAAAGCAATATTGGCCTAGTCCCTATCAGAATTATATCCATACCTGTCAAGATGGAGCAACCAACCCAACATTTTCTCCCAACATTATTTTTTTTTCAGGCTCTTGATGCTGTGAAGAGGATAAGCCCTAAGAGAGCTTTGCTGACTGGAATGGCACATGAGATCGAATACTACAAAGAAAATCAGAAGCTGGCAGAATGGTCTAGCAGGTATGCATAGACGGATGGTTCCTGAAACATTTTTATATGCACACATCTATTGTCTGGTTGAACTGTCTAACTTGTAAAATTGGGTGATCGTAGAGAAGGGATACCTGTACAATTAGCTCATGACGGCCTCCGCGTGTTTATTAACCTGTAATTTGGTATGCATCATAGTACACAATCCAAATTTGAGCAACATTGTTTTCCTGATATCATCATATATTTTCTTTACTCAGATGTCAAGTTGTCTCCTGCCTCTAGTAGGGGAATTGTTGTATGAATATACCCGAAAAAGCTGAATCTGATATATGTACGTCCCTTTCTCTTTTACTTAAATCACACGATTCAAAAATGTAAACTAGGAAAATAATGTAAAAAACATATATTTATTTTTGGGGGCCAATTTTCAATCTAGACTTTGGAAGCTAGTAGTAAATGTGAATGATTCAAACCACGCATTCTGTAAAAAGGAGAAAAGAATGATGGATGCAAAGGTTTGTCTTGGCAGTGAATGGGAAGAAACTTTCTTTTATGTATATGTACATAAGGAAGTCCACCGTTGTCATTCATTTGGAACTTTTGTGCTAATCTTTTGAGTGAGTGAATTGTTTGACCACTTCAAATCAATTACTGCCTGAGCTCACTTGACCTTACCACATGGGTTCAGATTTGCACTGACACTGAAGCTAGAGGTAGGTTACTCCAAACCAATTTTGTATATACATATTTACTATTACTGTTCATACATTTCTCGAAGCAACAAGAAATCGGGAATCTTGTGATAAACTTATAAAATCATGAATTCCTTCATTCCAAGACATACCCTGTTTTTTTAATCAATGAGATTATTCCAAGTAGCCAAGTAGGTAAAATTACAACTGATGAAAACTGAACATGCAGTCTGAAAACGTGAAGCACAGATGGATATGATGTGAAACATGGGATTAGTGTATTGGCATCTGGCATTTGAAAGATCAAACAATAAAAAACTAAAACTATTTCATACTTCAGTCAAGTCCTCAAAAGAAAGATGGAAAACGACTTCCCGCCGTCGGCACCATCGCCGAAGGATGCAAATGCAATACCAACTCCACTAAATCTCAAAGATGAGCAAGAGGAAAGAGGAGAGAAGCATAGCAAGAAAATTTGATGCATTCTCTATATATATACAAAGATCACACCAACCGAGCACAAAATCTTCCCCATTCCGCAGCAAAAGAGCAGCAAAGAGTTTATCAAGCCAGCGATGGAGCCTCCCGCCGGAGACGCTGCTCTGCCGCCGCCGCCGCCGTCGTCGTCGGTCATCTTCCTGGGCACCGGCTGCTCCGGCGCGCTCCCCGACACGCGGTGCCTCCTCAGGCCGTCCGCGCCGCCGTGCGCCGTCTGCTCCCTGGGCGTCTCGCTCCCACCGGAGCAAAACCCCAATTACAGGTGCGCTTGCAGTCAATATCCTGTGGCCTTCAAAATATATATCGACCAGCCTGATTCAGAGCATCTCCTAGTGCTACTGTAACCTGTCCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGTCAAACGTTGGTCGAAAAGTCAACGGCGTCATACATTAAAATATGGAAGGAGTACTCAACAGTACTATCTACTACCTTATCTTTAGATATAGACGAATGCGCGCTGCGAAGACAGGGTGGCCAATACGAGGATGTATACCCATGCAAGCACGGTATCTGCATCAATACACCAGGAAGCTACCGCTGCAAATGCAAGACAGGAACAAAACCAGATGGCACAAATTTCGGATGCCAACAAGTGCTCCCCATGGCTGCCAAAGTGATCATAGGTAAAACTACTAGATCCAAATAAATGGGTGGATGTGTAAAATGGATATGAGCAATTATTAGTTTCTTTTACAACATTACTTCTGTATTTTTTTTAGAATGGATGATGATGGGATTTAGACGTCAAGAGCTGCATCTTGTCAAACTTGAAAAGTAACAAAGAAGTGTTACTAGACAAGTATGAGTAGTATTTAGAGTGTTTTGAATCCGTCCATCCCATATAAGCTTTATCAAGATAAGCTGTGTGACATCTCAAAATTTGATCCAGTAAACAAAAGTAACAAATGGAGTAGATGTGACAAGGAGATCCACTGATCTAATTTTTTAATTATTTATGATTGTTTCTTGAGACTAGCATAATACCAAGGAGTTTTAAAAAAAGAACGTCATCAACGTATTTCTTTTATTACTTACATACACCTGTCAAATGGGCCTCTTGGTCTCACAATCTCTTTATTTTTCTCCTTTAAAAAAGTTGGTAGTTGGTGAGGGTGGAGTGGTAGATTCACCACTTACCCTCACCATTAGTGTCTTTAAAGGTATGGGCTAATGAGTTCTACATGTTGATTTTTAAAGAGTGCATTTTGATTTTTAAACGTCTTTACTATTAAATTGACCAATGATTGATCCTTGTCAATATTCTTCATTATTATGATCATGGCACAGCTCTAAATCCCATAACTTTACTGGATTTAAAGTTTGTAGATTAAATCGAGTGGTTTAAAATTGTATATTTTATTTAAAATAGAAACACAATAATTTATTCAACTGTTATAATGTAATCCTAGAATAGGGCTGTGCCAAACGTGGCCTATTAGTCAATATCAGTGAAAGCACATTGAAAGTTGCAATAAATGGCGCTAACTCAGCCTATCAAATAGGAACTTATTAACCCTCAAATAACCAAATATGAAATTTGCTCATATGAAGATTTGCTCAGGATCTTAGGGTGCTAGTGCTATTCAGGTCACTGCAACCACTAGGCTACATGCCCTTTCACAAACATAACACACATAATTAATCCTCCATCTTTGCAACTGAATTTCTGATAATTATTTTGCAGGGCTGAGTGCCTGTTCCATCTTCGTCATGGCTCTGTCATGCTTGCTAGTAATCCAACTCCAGAGAAGGCGGCACATCATCGAGAAGCAGGAGTACTTCAGGCGAAACGGAGGCCTGAGGCTGTACGACGAGATGGTGTCGAGGCAGGTCGACACGGTGCGCGTCCTCACCGTCGACGAGCTCAAGAAAGCCACCGACAACTTCAGCGACGCCCGCGTCCTCGGCCGCGGCGGCCACGGCACGGTCTACCGGGGCACGCTCGACGATCTCCGGGAGGTCGCCATCAAGAGGTCCAAGGCGGCGGTCGACGACGGCGGCGGCGACGGCGGCGGCGGCGGCGGCTGCAAGGAGGAGTTCGTCAACGAGATCATCGTGCTGTCGCAGATCAACCACCGCCACGTCGTGCGGCTGCTCGGCTGCTGCCTGGAGGTGCACGTCCCGATGCTGGTGTACGAGTTCGTCCCCAATGGCACCCTGTTCGAGCTCCTCCACGGCGGCGGCGGCGGGGCAGCGCGGCGGCGGCGGCCGGTGTCGCTGGGCCTCCGGCTGAAGATCGCGGCGCAGTCCGCGGAGGCGCTGGCGTACCTGCACTCGTCGGCGTCGCGCGCGATCCTCCACGGCGACGTCAAGTCCCTCAACATCCTGCTCGACGGCGCGCTCGACGCCAAGGTCGCCGACTTCGGCGCGTCGGCGCTGAGGTCCATGGGCGAGGGCGAGTTCATCGAGTTCGTGCAGGGCACCCTGGGTTACCTGGACCCGGAGAGCTTCGTGAGCCGGGAGCTCACCGACAAGAGCGACGTGTACAGCTTCGGCATCGTCCTCGCGGAGCTCATCACCCGCAAGAAGGCGGTGTACGACGACGGCGGCGGCGGTGGCTCCGGCGAGAAGCGGTCGCTGTCGTCCACGTTCCTCGCGGCCTCCAGCCGGGGCGAGCTCTGGAGAGTGGTGGACCGCGACATCATGGACGGCGACGGCGACGCCGACGCCGCCGTGGTCCGGGAGCTCGCCCGGGTCGCCGAGGAGTGCATGGGAGCGAGAGGCGAGGAGAGGCCGGCGATGAAGGAGGTGGCGGAGCGGCTGCAGGTGCTGAGGAGGGTGGAGATGCAAGCGGCGGCCGCAGGTGTTGAGGTGGTGGATGGCTTCAATGGAGGAGGATTAGTTGGGCGGCATGGGCATCTGGATACGACGATGACGACGACGACGACGTCTTATTACCAGAGCATGGAGACGGACAAGCTGCAGCTGGATGTTGATGACCTTGTACGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010157