Os12g0246700

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0246700| Description = Disease resistance protein family protein| Version = NM_001073026.1 GI:115488013 GeneID:4351886| Length = 3786 bp| ...")
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Gene Name

Os12g0246700

Description

Disease resistance protein family protein

Version

NM_001073026.1 GI:115488013 GeneID:4351886

Length

3786 bp

Definition

Oryza sativa Japonica Group Os12g0246700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8160536..8164321

Sequence Coding Region

8161152..8163948,8164035..8164054

Expression

GEO Profiles:Os12g0246700

Genome Context

<gbrowseImage1> name=NC_008405:8160536..8164321 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:8160536..8164321 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagagtctgtggtgtttggaatcctatgcaaaattggatcaatattggggtcacatctgacgcaggcattagtttcacatctggggaaggaggtatcagttttaattgaggttgaaagcattgtaaagcaaattagaagtgagtttaggttgatgcaatctttcctgcaagatggccaagaaaaagaaagctccagcaggcaggctgaaacctttctgcaggaagttcagcagatagcatttgaagttgaagacatcctggatgaatttgtctattattttggcagaaaagaaaccccatctgtggaattgttgaagaacttcttcagaaaatctgaaagtgtgatgccattgcgcagaatagcagcagaactcaaagaagtgcagaatcgtctccaaaatattcgaaacttgaaacttcagtacaatattgacttatctgaagaaagtgccagctccatcaggtatgaagatagcaaaggtcacacactccaccacataatgcataataagaaacttgtcggttttgtaaatgagcgacagaagctgcaagagttgctaatggcaaatgaaagatcatgctcaataatttccatatggggtatgggaggttccggtaaaactactcttgtcaaaactgtttccgaaagcaaagctagcaagaaccgttttgattgccagatctgggttaccgtgtctcaaacatatgacattactgaaataatgaggaagattatacagtgtgcattgaaggatacatgctcagctgacttaggaagcatgagtagtgaaggcgtagtgctgatgctccaggagactttgcagggaaggacatacatgatggtcttggatgatgtgtgggatacaaatgtttggttcagcttggaaggctttctagatgaaagcagcatcagaagtaaggtggtaattactactcgcataaatgatgttgcttctttggcagaagacaagcgccgtcttcaactacgaggattagatgaggcagagtcttgggacctcttttgcatgtgggctttccggcacggtgaagatcaaacatgtcctcctgcaatggaccgagtagcaagacagattgttggcaggtgtgaaggtctaccgttggctataacggcagtaggcaacttgctatccttcaaacggctggatttgatggagtgggagaaattctataatcaactgaactgggagttgcacaatcgcttggataaccaaggactcagcatggtgactcgactccttggtttaagctacaagcatctaccggtccacttgaagaactgtttccttttatgcagtatcttcccagaggactatatgatacgcgggaagcggctatgtaaactattagtagtagaaggtcttgttgaaccaagaaaaaacatgacactggaggagattgcaatggagtacatagaaaagctagtagatcgctgcctgcttcaagttgctcggagaaataagcttggaagagtatgggaactccagatgcatgacattatcagggagctggcaatttcaatatccgaaaaggaaggattctgcatgatacataataaagctcagagatcggtggttgagtgcgagcctcgtcggttatcaattcatgagaattcagtcagagtccagctaagtataaatgcttcacgtgttcgttctttctatcaatttgatatcgattgttcctccgtgtcaaaagtgcaatgggtatcaaggactgctaggtacctgaaggttctggaactaggtagtgttccaatcagaaaactgccgagagacattgggaacttgttcaatttacattatttaggattaagacgaaccaagatcaagcaacttcctgaatcgattgacaggctccaaaatctccgaactttggacatcttccttactgaaatagcaagtcttccacgtggcgtaaccaggctaaggatgctacgccatctgattgctggaaaggctgttgcttcttattttggcctcgaagatgtcttcacaggtgtcaaagtccccaatggattatggcgatcactggatctaaatgtcctcacaggcatttctgcaagcagcaatttggtggaacaattggccagctttacacagctgagatcattgaagttgacagacgtaaaaaatatccactatacaaagctatttgcatccatcagaaagatgcagcttctaaagaaccttcttattggaactgccaatagtgatgagtatgtcagcttagaagccctagatcctgcacctcagaaccttgaaatactctttgtgaaaggtagactccatgatagggttataggctctgacctatttgaggcaaataggctaaccctcatggagttgactcttgaaaatagcaggctgagcatagatccacttccatcactatctaatttctgtaacctgacccttcttggtctgttcaaccattatattggagaaaccttgctctttcaggcagagtggtttcctaagcttcatacacttactttggctgagctgcaaaatgtcagttcaatagtgattgaaaagcatagcatgccaaatctctataactttgctctcatctgcttgacaaatttagaggatttgcctgagggcatggaattccttgggtctgttgaagagctcagtttggtgggcatgcaccaaaaattcatggaacatgtacaaggttcctcaaatgtaaaagtcaaacacattcctgtagttgactactttgatcaaaccaaagggaggtgggatcgactttctccactttatttcgaagacgaaggcactaagaattga</cdnaseq>

Protein Sequence

<aaseq>MAESVVFGILCKIGSILGSHLTQALVSHLGKEVSVLIEVESIVK QIRSEFRLMQSFLQDGQEKESSSRQAETFLQEVQQIAFEVEDILDEFVYYFGRKETPS VELLKNFFRKSESVMPLRRIAAELKEVQNRLQNIRNLKLQYNIDLSEESASSIRYEDS KGHTLHHIMHNKKLVGFVNERQKLQELLMANERSCSIISIWGMGGSGKTTLVKTVSES KASKNRFDCQIWVTVSQTYDITEIMRKIIQCALKDTCSADLGSMSSEGVVLMLQETLQ GRTYMMVLDDVWDTNVWFSLEGFLDESSIRSKVVITTRINDVASLAEDKRRLQLRGLD EAESWDLFCMWAFRHGEDQTCPPAMDRVARQIVGRCEGLPLAITAVGNLLSFKRLDLM EWEKFYNQLNWELHNRLDNQGLSMVTRLLGLSYKHLPVHLKNCFLLCSIFPEDYMIRG KRLCKLLVVEGLVEPRKNMTLEEIAMEYIEKLVDRCLLQVARRNKLGRVWELQMHDII RELAISISEKEGFCMIHNKAQRSVVECEPRRLSIHENSVRVQLSINASRVRSFYQFDI DCSSVSKVQWVSRTARYLKVLELGSVPIRKLPRDIGNLFNLHYLGLRRTKIKQLPESI DRLQNLRTLDIFLTEIASLPRGVTRLRMLRHLIAGKAVASYFGLEDVFTGVKVPNGLW RSLDLNVLTGISASSNLVEQLASFTQLRSLKLTDVKNIHYTKLFASIRKMQLLKNLLI GTANSDEYVSLEALDPAPQNLEILFVKGRLHDRVIGSDLFEANRLTLMELTLENSRLS IDPLPSLSNFCNLTLLGLFNHYIGETLLFQAEWFPKLHTLTLAELQNVSSIVIEKHSM PNLYNFALICLTNLEDLPEGMEFLGSVEELSLVGMHQKFMEHVQGSSNVKVKHIPVVD YFDQTKGRWDRLSPLYFEDEGTKN</aaseq>

Gene Sequence

<dnaseqindica>617..3413#3500..3519#attattggtgtgtctatgggtttaccaggttcccattgatagtgtgcaaaccacggcgcacactctggccggtcgtcagttcaaccacccgccaactgttcgatcaaatgcctccagggcgtctactttgccattgcaattcccatctgcgagaaaagcttcggcgagcaaacacaggtaattcatgtaccttctccgttctatcttgccttatttagtctgtttctctcccttatgtataggcttataggtggttttgtggtttgggttccatgttttttacataaaaaaggctgaaaaagaaagagtatattgccttcgattggaccagaaattagattgtgtagcatctgtttatttgaagagaaaattccttatatgccacttaaacttcaccggtttcttatttgaattgttacatggatacatctggcaccaaaaaatttgtgaaataagtctgaaatgacaaccgttctgttattttttaacttaatgcaatttttcaagaactctggtacaaagtaatttgtaggatgaaaatttattattggatgcttgttcattttgtttcaggtcttgcatttgaaaatatctgaactgagagatcgagcactgaatggcagagtctgtggtgtttggaatcctatgcaaaattggatcaatattggggtcacatctgacgcaggcattagtttcacatctggggaaggaggtatcagttttaattgaggttgaaagcattgtaaagcaaattagaagtgagtttaggttgatgcaatctttcctgcaagatggccaagaaaaagaaagctccagcaggcaggctgaaacctttctgcaggaagttcagcagatagcatttgaagttgaagacatcctggatgaatttgtctattattttggcagaaaagaaaccccatctgtggaattgttgaagaacttcttcagaaaatctgaaagtgtgatgccattgcgcagaatagcagcagaactcaaagaagtgcagaatcgtctccaaaatattcgaaacttgaaacttcagtacaatattgacttatctgaagaaagtgccagctccatcaggtatgaagatagcaaaggtcacacactccaccacataatgcataataagaaacttgtcggttttgtaaatgagcgacagaagctgcaagagttgctaatggcaaatgaaagatcatgctcaataatttccatatggggtatgggaggttccggtaaaactactcttgtcaaaactgtttccgaaagcaaagctagcaagaaccgttttgattgccagatctgggttaccgtgtctcaaacatatgacattactgaaataatgaggaagattatacagtgtgcattgaaggatacatgctcagctgacttaggaagcatgagtagtgaaggcgtagtgctgatgctccaggagactttgcagggaaggacatacatgatggtcttggatgatgtgtgggatacaaatgtttggttcagcttggaaggctttctagatgaaagcagcatcagaagtaaggtggtaattactactcgcataaatgatgttgcttctttggcagaagacaagcgccgtcttcaactacgaggattagatgaggcagagtcttgggacctcttttgcatgtgggctttccggcacggtgaagatcaaacatgtcctcctgcaatggaccgagtagcaagacagattgttggcaggtgtgaaggtctaccgttggctataacggcagtaggcaacttgctatccttcaaacggctggatttgatggagtgggagaaattctataatcaactgaactgggagttgcacaatcgcttggataaccaaggactcagcatggtgactcgactccttggtttaagctacaagcatctaccggtccacttgaagaactgtttccttttatgcagtatcttcccagaggactatatgatacgcgggaagcggctatgtaaactattagtagtagaaggtcttgttgaaccaagaaaaaacatgacactggaggagattgcaatggagtacatagaaaagctagtagatcgctgcctgcttcaagttgctcggagaaataagcttggaagagtatgggaactccagatgcatgacattatcagggagctggcaatttcaatatccgaaaaggaaggattctgcatgatacataataaagctcagagatcggtggttgagtgcgagcctcgtcggttatcaattcatgagaattcagtcagagtccagctaagtataaatgcttcacgtgttcgttctttctatcaatttgatatcgattgttcctccgtgtcaaaagtgcaatgggtatcaaggactgctaggtacctgaaggttctggaactaggtagtgttccaatcagaaaactgccgagagacattgggaacttgttcaatttacattatttaggattaagacgaaccaagatcaagcaacttcctgaatcgattgacaggctccaaaatctccgaactttggacatcttccttactgaaatagcaagtcttccacgtggcgtaaccaggctaaggatgctacgccatctgattgctggaaaggctgttgcttcttattttggcctcgaagatgtcttcacaggtgtcaaagtccccaatggattatggcgatcactggatctaaatgtcctcacaggcatttctgcaagcagcaatttggtggaacaattggccagctttacacagctgagatcattgaagttgacagacgtaaaaaatatccactatacaaagctatttgcatccatcagaaagatgcagcttctaaagaaccttcttattggaactgccaatagtgatgagtatgtcagcttagaagccctagatcctgcacctcagaaccttgaaatactctttgtgaaaggtagactccatgatagggttataggctctgacctatttgaggcaaataggctaaccctcatggagttgactcttgaaaatagcaggctgagcatagatccacttccatcactatctaatttctgtaacctgacccttcttggtctgttcaaccattatattggagaaaccttgctctttcaggcagagtggtttcctaagcttcatacacttactttggctgagctgcaaaatgtcagttcaatagtgattgaaaagcatagcatgccaaatctctataactttgctctcatctgcttgacaaatttagaggatttgcctgagggcatggaattccttgggtctgttgaagagctcagtttggtgggcatgcaccaaaaattcatggaacatgtacaaggttcctcaaatgtaaaagtcaaacacattcctgtagttgactactttgatcaaaccaaagggaggtgggatcgactttctccactttatttcgaaggtgagtcaaaaacctgtccacagcctgtccaacatagagttgatgcgttcttttgagcttcaatgattgattctcttaatttgcagacgaaggcactaagaattgaaattaaacacaagcaaagaaaagatggattacctgcactccgagcttatcctattccccactcatttctactagagatctttctactatgttctctctattggcatccaaaaatatttctatgtattttgccactcttacattagtatccttttgccatctccattcggttgatgattgttgacttccattgttgggccccatcgtttcgcttttttttctagtaagccaaaacggcttattagaaaataaaaatgaatttataggt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0246700, RefSeq:Os12g0246700