BGIOSGA010174

From RiceWiki
Revision as of 09:12, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010174| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010174, complete gene.| tag = B1394A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010174

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010174, complete gene.

LocusTag

B1394A07.17

Ensembl Transcript ID

BGIOSGA010174-TA

Ensembl Protein ID

BGIOSGA010174-PA

Length

3118

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28474097..28477214

Sequence Coding Region

28477181..28477214,28476791..28476835,28476550..28476584,28475810..28475860,28475618..28475722
,28475447..28475518,28475266..28475337,28474617..28474697,28474460..28474495
,28474296..28474360,28474097..28474190

Genome Context

<gbrowseImage1> name=IndicaChromosome03:28474097..28477214 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:28474097..28477214 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGAGTTGAGAGAGAGATTGGCTCCCTACAAATGGAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGAGGCTTAGGCAACAAATTGTCAATTTGCAAGGCACGCGGGCACAAATACGTGGAGTTGCTACTCATACACAGGCAATGTACGCAGGCACTTCAATATCTGCAGGAATGAAAGGTGCAAGCAAAGCAATGGCAGCAATGAATAAGCAAATGGAACCAACAAAACAGATCAAGGTTATGAGAGAATTCCAGAAACAATCAAATCAGTTGGACATGACGCTTGAAATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAACCAGGTTCTTGATGAGATTGGTGTTGATGTGGCTTCTCAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCCCTTCGCCGCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MNIFKKKVDPKEALRTSKREMSVATRGVEREIGSLQMEEKKLVAEIKKTAKTGNEAATKILARQLVRLRQQIVNLQGTRAQIRGVATHTQAMYAGTSISAGMKGASKAMAAMNKQMEPTKQIKVMREFQKQSNQLDMTLEMMSDAIDETLDKDEAEEETEELTNQVLDEIGVDVASQLSSAPKGRIAASNRKAESNQARNAAPPRNNVEPESSAEVDDLERRLASLRRI</aaseq>

Gene Sequence

<dnaseqindica>1..34#380..424#631..665#1355..1405#1493..1597#1697..1768#1878..1949#2518..2598#2720..2755#2855..2919#3025..3118#ATGAACATCTTCAAGAAGAAGGTCGACCCCAAAGGTGCGGTTGCGGTTCCACTTCTTGGATTTCGCTCCTCTTTTTCTTGGTCTATGTCGGCGGGGTGGGGTTTCTACCGTAGGGGTCGATTTGGTCCGATCTGCAGCTGCGTTGCGATGATGCGTCTGTTCTTGCGGTCGGAGAGTGAGATCCTTGCTGGGTTTTGGGCTTTTCTTGGTGTGGATTGGAGAGTGGGGGTTTCTTTTTCTTGCGTTGATTGGGGGGGGGGGGTGGAGGAATCTGTAATCTCTGTGGATTATTTGTGGAAACCAGTGAATAAAAAAGATTTGGGGGTTAAGTCTTTTGGTGGTGTGATGAACTGATGGTGATGTTTAATGTCACTTGCAGAGGCTCTCAGGACCAGCAAGAGGGAGATGTCAGTTGCTACACGGGGTGAGAACAATTTCCATCTGCTCCTCTTTCTGTTGCTCCCTCCACTGATCCACGCACAAAACATTTTAAGTTCATGAATATGGGTGGTTTGGTTTAGTAGTGGACAAATTCATGACTTGTATCGCAGCACAGTTGCACCGAATAAGATTACAGCAGCTTAGCTTCTGACACTACCTTTTCTCTTTTTATTTTTATACTAATTTTAGGAGTTGAGAGAGAGATTGGCTCCCTACAAATGGAGGTATGCACTTCTCTTTATCCTATATATAATTCAGGATACAAAAGGTTCAGAAAAGACAATGTGACAAACTTTGGCCATATTTCGCATTACTGAGTACAGAGTACTACTGAGTAGGCAGCATTAGGTAGCACTGACGGTATGTCAGAAAAAAAAAGTAACAGTTTGGTCATGTACTCATGTTTATGTTGGGAAGCCAGTATTATTCTATCATCATGCTTATGGTGTCCGATGGACTGATGTTTGCAATGTTTAGTATCAGGAGTGCAATAGCACTGCTATTTTTAAGAGAAATACTCTATCTTTTATGTTCATTTAATTTTAGGTAAATTGAGGTTGATAGCATCACTTTGAACCTTGACAACATATGTGCTTGTCTTCTTCAATATAGTAAAGTTAGCCTAGATCCAGATGAAAAGGGCTTTGGGTAGACTGCTAGTTCTTTCCATGTAACTCTGGCAGCTCAAATACTCTGTAAGGTGTAACAAGAACTTGAGTGCTTTTTGCTGTGTACTTAGTTTTTTATGCTGCCATGCCTTCATGGTCTGGAAGTGGAAAACATTTCAGCCTGGATCAGAAAAGCATATCGATCAGCACTGTTCGGAACTCTTTTTTTTTTTCACCTACCATCTACAGTAACTTGTGCAAAATGTACCTTCTGATTTGGTAATGTCATAATTGTACCATTCCAGGAGAAGAAACTAGTTGCTGAGATTAAGAAAACTGCTAAGACAGGAAATGAGGTAAGCCTTTTAGGATTTGTGGGAGACCCCTAAAGTCCATTCTGGTTCTTCCTGATATCCTATAATAAATGATCTGGATCACTCTAGGCTGCGACCAAAATCCTAGCTCGGCAACTTGTGAGGCTTAGGCAACAAATTGTCAATTTGCAAGGCACGCGGGCACAAATACGTGGAGTTGCTACTCATACACAGGCATGTCTAGTTTTCAATTTGTTTTATGCAACTGCATGTTCTGGCTGTTGGCAAAACACATTTAGTCATTTATGATCAAAACTTGTCTCTTTTATTCAGGCAATGTACGCAGGCACTTCAATATCTGCAGGAATGAAAGGTGCAAGCAAAGCAATGGCAGCAATGAATAAGGTCTGATGAAAGACAGCTATGGTTGGCTGTTGTTAAACATGTTATCTAATCTATAGTCATTTTTCTTGTGAACCTTTTTGGTGACACGTTATACTGTTTATTTTTCCAGCAAATGGAACCAACAAAACAGATCAAGGTTATGAGAGAATTCCAGAAACAATCAAATCAGTTGGACATGACGGTAAGAACATTTAGGGCATGCTGGGTTTGTTACAGTATAAAGTGGGAATGTTCCGCCATGTTACCACTTGAATCTTTTTGCTTAATTAGTTGCTTTGCACTAATAAACATAGACAAGATCAGGGCAGACATACAACTTAGCACAATACAGAGAATCATTAAATGTTGTATGAACAAACTTGTTTTGTGGAGATGATTCATAATAGCCAATGCAATTATTGTAGGCTTCAAACGATTATAGTTATGTTGGACAAGACATCATACGATTATTAACTATTTTAATGCAATACAACCTATTAACAATCTATGTGATGAGTGACACCTTTTAATTTTATGTAGAATAATGCCAACCTGCTCAAAGGGCTAACTAATAATATATGATCATGAGCAGTTAATCTTTCGAAAGATTGCCTAGATTTTTATCCGTGCAATAGCAGATCTGTGACTGTTCCTCCAAATGTTAAAACACAAATGATGTGCTCTAGCTGCCACCATCCATGCGCCAACTTAGTACCACTTGTCTCGGCTACTCCGGAGAAAAGAAAGATAAATCCTATTTTTACATGCAGCTTGAAATGATGTCCGATGCTATAGATGAAACACTTGATAAGGACGAGGCAGAAGAGGAAACAGAAGAACTTACTAACCAGGTAAAGTATTGCGCTGTACATATCAGTTGATAAGGATTTTTCTGAATATATGGCCAGAAATTGTGCTTCATGATTTTTCCATTCGCTCATATGATATTTCCTTCTGTTCCCCCCTATGCAGGTTCTTGATGAGATTGGTGTTGATGTGGCTTCTCAGGTAAATTTATTCCTCAATATGCCATCATGTTAGTTGTTAGGCATCATACAAGTACCTCATAATTCTAAATGCTGACTCCAATCTTTCATGAAAATACAGCTGTCTTCAGCTCCTAAAGGTCGTATTGCGGCGAGCAACAGGAAAGCTGAGAGCAACCAAGCACGGTATAATGTTTCTTTTTCAGTCATCAACCGAGCAAATGAATTTGGGCTCTGTTCTGCACCTTTCTATCTGTTATAGTTTTCCTGATGCGCATGTTGTGCCTGCAGAAATGCCGCTCCCCCCAGAAATAACGTGGAGCCTGAATCCTCTGCTGAAGTTGACGACCTGGAGAGGAGACTGGCTTCCCTTCGCCGCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010174