Os12g0256000

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0256000| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001073038.1 GI:115488037 GeneID:4351903| Length...")
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Gene Name

Os12g0256000

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001073038.1 GI:115488037 GeneID:4351903

Length

4882 bp

Definition

Oryza sativa Japonica Group Os12g0256000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8791410..8796291

Sequence Coding Region

8791514..8792301,8795220..8795757

Expression

GEO Profiles:Os12g0256000

Genome Context

<gbrowseImage1> name=NC_008405:8791410..8796291 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:8791410..8796291 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccccccgtcgcaatccagctctacagcctcctcttcaagctcatcctccgccgccgcctctcctccctctccgcctccgccgcctcctcctcctcctcattcggcgtctcctcccgcgccgccgccgaccaccaccacccctcgccgccttccaatccctccttctcctccgccgccggcgctgacgctgttgccaccaaggacctccaccccgacccgctctcctccctccacctccgcctcttcctccccaacccgcaccacagcgccgcccccgccgccgccgcgaacgctccgcctccgctgcggcggaactcgttcccgcagccagcgcacgacgggggcagccccgcggcggcggtggggcaggagctctcccgccgcgccagcgcgagcttcagcggggtgtcgccctccgccgcgccgtgctacggcgggtacctgccgacggcgcgctccgggaggaggctgccggtgatcgtgcagttccacgggggcgcgttcgccacgggcgcggccgacagcgccgccaacgacgccttctgccgccgcgtcgcgcggctctgcgacgccatcgtggtggccgtcgggtaccggctcgcgccggagagcaggtaccccgccgcgttcgaggacggggtcacggtgctcaaatggatcgccaagcaggccaacctcgccgcgtgcgggcggacgatggcgaggggggcgggctctggaggggccgattcgttcggcgcggcgttggtcgagccgtggctagctgcgcacgccgatccatccaggtgtgttctccttggtgtcagctgcggagcgaacattgctgactatgtggctcgaaaagctgttgaggctgggaaactcctcgaccccatcaaggtcgtcgctcaggttttgatgtatccatttttcatggggactagtcccacgcaatcggaactgaagctggcaaactcctatttctatgacaagtcaacgtgcttactggcctggaaactcttcttgcctgagggtgaattcagcttggatcatccagctgcaaaccctcttgttcccggtaaaggtccccctttgaagctcattcctccaacattgacagttgttgcggagctggactggatgaaggaccgcgcgatcgcttactcggaggagctccgcaaggtaaatgtggatgcccctgttctcgagtacaaggatgcggtccatgagttcgccacgctggacgtcttgctgaaaacaccactggctcaggcttgcgccgaagatatagccatctgggttaagaagtacatatcactgcgtggccatgaattatcatattga</cdnaseq>

Protein Sequence

<aaseq>MPPVAIQLYSLLFKLILRRRLSSLSASAASSSSSFGVSSRAAAD HHHPSPPSNPSFSSAAGADAVATKDLHPDPLSSLHLRLFLPNPHHSAAPAAAANAPPP LRRNSFPQPAHDGGSPAAAVGQELSRRASASFSGVSPSAAPCYGGYLPTARSGRRLPV IVQFHGGAFATGAADSAANDAFCRRVARLCDAIVVAVGYRLAPESRYPAAFEDGVTVL KWIAKQANLAACGRTMARGAGSGGADSFGAALVEPWLAAHADPSRCVLLGVSCGANIA DYVARKAVEAGKLLDPIKVVAQVLMYPFFMGTSPTQSELKLANSYFYDKSTCLLAWKL FLPEGEFSLDHPAANPLVPGKGPPLKLIPPTLTVVAELDWMKDRAIAYSEELRKVNVD APVLEYKDAVHEFATLDVLLKTPLAQACAEDIAIWVKKYISLRGHELSY</aaseq>

Gene Sequence

<dnaseqindica>105..892#3811..4348#ggaaggccacctctcccatggcaccaccaccaccctgacgccgacgccgacgccgactgactcacccgccggcgagcccacgccgcccaccgccggagacggccatgccccccgtcgcaatccagctctacagcctcctcttcaagctcatcctccgccgccgcctctcctccctctccgcctccgccgcctcctcctcctcctcattcggcgtctcctcccgcgccgccgccgaccaccaccacccctcgccgccttccaatccctccttctcctccgccgccggcgctgacgctgttgccaccaaggacctccaccccgacccgctctcctccctccacctccgcctcttcctccccaacccgcaccacagcgccgcccccgccgccgccgcgaacgctccgcctccgctgcggcggaactcgttcccgcagccagcgcacgacgggggcagccccgcggcggcggtggggcaggagctctcccgccgcgccagcgcgagcttcagcggggtgtcgccctccgccgcgccgtgctacggcgggtacctgccgacggcgcgctccgggaggaggctgccggtgatcgtgcagttccacgggggcgcgttcgccacgggcgcggccgacagcgccgccaacgacgccttctgccgccgcgtcgcgcggctctgcgacgccatcgtggtggccgtcgggtaccggctcgcgccggagagcaggtaccccgccgcgttcgaggacggggtcacggtgctcaaatggatcgccaagcaggccaacctcgccgcgtgcgggcggacgatggcgaggggggcgggctctggaggggccgattcgttcggcgcggcgttggtcgagccgtggctagctgcgcacgccgatccatccaggtgcggtttcttggcctgatttcttgggattcgttttttggttgccgtgtggatgagtattgttcgttcctggttgctagaatctagattctagagtcagcattgagcattgcaagatttggtgtggtgacttgttaggttatgatgaagtgattgcgtttgatggatgaatggtctttactatagtgagctaatctcatttcttgcggatttgcgtcgtccaactttgcaatgtgtgtgataactgataaactttcgggaatgtaggttttgttttgacagatctagtgaggattgtgtttgtagatctgatcaattctgtgctggagctttggatttagtcatatacttattttcttggttgagaaacctgagatagaactaacgctcaagccgctgcataatgtggcatacatgatagtttgcagactgtattcaactgccactgacacatggccaactcaggcatgattggttttcaaataagttcaatgatgggcagttgaatgtaggagtaaacaatatcaacttaggaataaggagactgaatttagaattgttctttcaaccagtcctatgattctttatgttggtcgaattcagttggtcccttctcaagcctacactgtaaatatagtggtttaagttaaaccatttaaatggatggctttagatctattctcgatcgtagcctgtacttcgctgtagatcgtaaccatttaatagatgccttctctgtagatggtggtagcatgagctgcacagtggtcattctggtatacatgttcaaaatttgtcctgtgcctgcatcttaatggattatgggttctcatgtgttcaagaaatttgaagtcgaccatgacagaattaatgtgtgtgtaacaatatcaagtggttaatagtagtagtcaggagacgaggggagggagaaaagggttggaaccttggaggagaaatatcagtttgcatctgcatgctcttggagatcaggaggttgaggaagaataagaggagatggttagcggcactggattgctgggtgtaaggagcaggtggagacagaaaatcaaactaacccattgcgttctatatgacttgaaggggaaggggttttatgaaatgagagatgaggaaaaaataggagcttaagtgctgaacaaaataatgggataaaaaaatgagtattggaaagggtgaatcatcattgggaaagatgtgtggcacatggtgttcttttgttgggacatggtgagatgatttctagagtttcataagtgccttgtggctccactattgcattgtttatctattatatcttcagtaatgttccagattgtttcgtatgcatgaatatttgttatatatatattttttttgttggcattttgatctgtgggcataaattgcatgtgaggccaaaagtactatattttgaaatatgagaacctaaagtactcatgcagtcacgcttctcaaaaacattttgtttgatggtgaccatgtctgtgtcagattaaatcttgatcaactattcagctttctgttgtagcatgaagtttaatggggatgacagaaaaatgtgtagctgttatgcttccctttatataggatagtttttaggcattggcatattcagtgcttcagtgaattatgttgaaggattaaagtctgagttgatcatgattaagtgcttcagtgaattatgttgaaggattaaagtctgagttgatcatgattacgttgttagataattggcgagaagaaacaacatacgatcttcaagatggagattaggttagtttagatttctttttatgtaacctgcccttacaaaagactcaaactattgtacaaagcatagtgactgctagcccaaatatgttagcaacaaagatgcattgtttatacttttccatgatacattttatgatttcttatatcttcagttgttgcttctagtattcatgatggaagtatgacaataatttatgttacatttttttgccgcatgctctctgaaggataattttcattttttatgtttctggggtgatcaatgggctgcgaatgcaagctcaatttgatcggatcagtaccaccattgtgaacatcctttgaaatcatgtatgttaaccgacgaaagccaaactaaagggtataatttgtttggctaaaatcttgggattagaaattagaaagcagtccagatatcagtgaaaacttgtggtaagacaaagcaggatggagccaattcagattcgtactcagctgggaaaagtaatcaggaaaatatatgcattatatgccttaggaattgaagtgtgctagtgttttacaatggagttgataatatcagtttcggcatgcaagaaataagtcaacctttgtattcctaacccgtctactttctcccatcccctgctgatattggtgttgaatgctggtgagtagtccttacaattacaataattgcagtaaaggtacccaccagtcgaccacagcaactgtaagttcattgatctgataaattggcaaaacatatgaccacaacaattgtaagatcattgttctgataaatcgacaaaatgtagcttgaactaatatttccctacatctgttcttctctagctatttaattcaacagaatagccccatccccacctggtctctgataccttgtgtgtttaaccttttttgttttgtgtaacagtgtaattcgtttgcgtgttgatctgtgtgttgtgtgtgcctcacattatacatccctcctgttctagacatttcatttcttatgcatcctagttgtagtggtgtggtgcacatgtgacttctaagtgtcagtgttctgtattttgtttaatggtaaatgtgctactgataccagttactgacatgcatttcctctttgatggtaataggtgtgttctccttggtgtcagctgcggagcgaacattgctgactatgtggctcgaaaagctgttgaggctgggaaactcctcgaccccatcaaggtcgtcgctcaggttttgatgtatccatttttcatggggactagtcccacgcaatcggaactgaagctggcaaactcctatttctatgacaagtcaacgtgcttactggcctggaaactcttcttgcctgagggtgaattcagcttggatcatccagctgcaaaccctcttgttcccggtaaaggtccccctttgaagctcattcctccaacattgacagttgttgcggagctggactggatgaaggaccgcgcgatcgcttactcggaggagctccgcaaggtaaatgtggatgcccctgttctcgagtacaaggatgcggtccatgagttcgccacgctggacgtcttgctgaaaacaccactggctcaggcttgcgccgaagatatagccatctgggttaagaagtacatatcactgcgtggccatgaattatcatattgactgtgtcgcggtgcgctttcaacgagattttcacctgagctgcgcccttcaaggcttcgcaatggtcactccactacttcatttacctcccatgctgcactgaaaccatttgatgaagcagggagaggtacactggccgagtggtaacatgggtgctgaagaaaggagggggagagagagagatgctctgtgatgtaagttggttcttttatggcaatttaggttgcctggggtcaaggatctgagtgtaatctagtacaggacggttgttgtatatttccacgttctaatggcatctcaagttttcatgtattcgcttccctgtccatagatctgcttggcctgatcaaagcggtttattctgtttctgtttttaccccctggtaatgagttgatatgcaaaacgcatcttataaatgggaggagtgatcaaacggtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtatgtatgtatgtatgtatatttatttatttatttatttatttattcgattattgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0256000, RefSeq:Os12g0256000