BGIOSGA010321

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Revision as of 09:14, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010321| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010321, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA010321

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010321, complete gene.

LocusTag

OSJNBB0042N11.21

Ensembl Transcript ID

BGIOSGA010321-TA

Ensembl Protein ID

BGIOSGA010321-PA

Length

4250

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25326072..25330321

Sequence Coding Region

25329721..25330321,25328161..25329509,25327994..25328069,25327586..25327899,25326320..25326418
,25326072..25326224

Genome Context

<gbrowseImage1> name=IndicaChromosome03:25326072..25330321 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:25326072..25330321 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTGGTGCTGCTTGCAAAAAGATTAACCTGATTTCTCCTAGGCGATCTCCTAGGCTCAAGAATATCCGTGTTATATATGGTGAACATTCTGAAACGAACTATCCTACCTTGAGGCCTGTCAAAACTGAGGTCATCGATCTTGAAGAAATTGCATCTCCTTCCAACCCAGAATTTAATGATGATTCTGTTGGTGACGAAGACTTTCAGAATGTGTCTCTGAAGGATTTAAGAGCTCAGTGTAAAGCTAAGAACAGGAGGGCCTTGAAAGTTGATTCTGAAAGACCTGACTTTAAGAATCAGAGACAATGTGGAAAGAGAAACCTTGAAGATGAAGTACCAAAAGAGGAAGTTGATCTTGATGAGCCCATTATTGCATTCAGACAGAAGCGGCAGAAGACATCCCCTACCAAATCAAACAGAACAATGGGCAAACCAATATCTCTAAATGCTGTAAAACTGCAAGATACAACATTGAGGAGAGAGGAGACTGAGCCTATAAAATTACCCCCACTTGAGGTAACATCACATGACTCTATGTCAACTGCAGAGAAGATGGAAAGGAGTGCTGCAGATGTAAAACACTCCACAATTGCTGCTGGTAATACTGAAGAAATAGTTGGGGAGAACATTTTATATGCTGAAATGGAAAACACACCATTATCAACTGGTGCTGTAATAAGTGGTAGAAGCCCAGACATATTTTGCGAAATCAAGACTGAGGATGAGGATATTTACTCTGATGAGCAAGTTGGAGTATCTAGTCCAGGAAAGGGCTCCTTTCAGGACTCATTTGCTGAGTTGCATAGGGAGCCAATAGAGTATGATGGATGTCAACAACACAGTGGTGTCATCCCTCAACCAATTGAACTAAAGGATGTTTCTGATGATTCCTGTGAGCTAGCTAACAGTATCAAAGCATACTGTTTGGATGACATTATACTGCAAAACAAGACAAATGACAGTCTTTCTTCATTGGATATCACTGATGAAATGAGCAACTGCCATAAAACATCAGGCAATATAACAAATTTAGATGAAGACAAGTCTTCAGTTGTCAATGATTATTTGGTATGTTCTGTTAATATGTCTTGTGAAGATCATATAGACATCGATGAATACTGGTATCCACGAGATCTACATGGCAGTACACTGGAAAGCACAAAGACTATAGAAAGTTCTACTGATCAGTGTAACGCAGAGGTGGGGTCTCCATCCGTGGTCATCCAATCTGATTTATGTGGAAGTGCAGAAAGCAACTTCACGTCGCTTGCAGAGGTTGTGCAGATGAAGGCAGATGGTCAATTTGATTCACTAGTTCAGCACAGTGTTGGAACAAAGGATGTATTACCTATTGATGTTGGACTTGCAACTAACGATTGCACTTTTGCTTTTAACAAGACTCTTGACTCAGTGAAAGCTGCCAATTTTACCACACAAGATGGACGGCTAGAAAGTATAGTATATGATGCTCTGAATAATCATGCACAGAGGAAGAGTACTGAAACTGAAACTCCTGTTGGTGTCTCAGGTGCTGCCATCATTTCAAGCCCATTCGTAAGTGAGGGCACTGACAGAGAACCCACTGGATCCAAAGCTCCACATGGTGGTCAGCTCTTACTTCCTTGTGTTACAGAGTGGTTATCAAAGGATATAGATCAGTTAAAGGTTACAGTGGATGATGACATCTGTAAAACTAACAGTGATCAAGGATCAAGAGAACAATTTGGCCTTCAGCCGCAGTTATTACAATCTTGTTCTGACTTGGACAAAGTTTGTGTAACATCAGAGAGCTCGAGTCCTGAAGAAACACAGGAAATGCCTGCTGGGTCTTTGGATTCAACTGCAGCCTCTCTCGATACTGATGGACAAAGTGAAAAGTTACAACCTTTCATTGATGAAGGAGCTCTTGAAGAGCATGCTCCAAAAAAACTGCTGTCCAAGAGAAAGATTATGTCCCCGACTTCTCAGGAGAAGCTTTGCAGTGCTTTGACTGGTATTGATTTGTGCGGGGTCCAAAGGCTCAAGAGAAAGATCCTTCTTGAAGATTATGGCAAGACGAGGAGACCCAATGGCAGGAGTTCCCTCTCCCCTACAAGCAAAGGAATTCTGAAGGGAACAGAATCCCCATCCCCCCAAAAGACTACTTGTACTTGCATGAAAGCTGCTTCAGTTATATTGGACGCCGAGAAGGCTGTTGAGTTTTCACAAAGGCAAATGCATGATATAGAAAACATTGCATCCAAACTTATGAGAAGCTTGAATCACATGAGAAGTATAGTAGACGGAAATTTGTTATCAGAATCACATTCTTTGCTACCTACTTTCAACACTGCTGAGATCAGAGCAGCCTCTGAGGATGCATTAGAGGTGGAGAGAACTACAAGGAAATGGTTGACAATAATGAACAAAGATTGCAACCGCTTTTGTAAAATACTGAGATTAGCAGGGAAGAAGGCTGTTTCTCATTCTGAAGTTCCAAGAAAACGAAAGAAGATAACATTTGCGGATGAAACTGGAGGAAAGCTCTGTCATGTTAAGATGTTTACTGATGGACAAAACTCTCTTCTTTCTGAATGCCATAGCGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MPGAACKKINLISPRRSPRLKNIRVIYGEHSETNYPTLRPVKTEVIDLEEIASPSNPEFNDDSVGDEDFQNVSLKDLRAQCKAKNRRALKVDSERPDFKNQRQCGKRNLEDEVPKEEVDLDEPIIAFRQKRQKTSPTKSNRTMGKPISLNAVKLQDTTLRREETEPIKLPPLEVTSHDSMSTAEKMERSAADVKHSTIAAGNTEEIVGENILYAEMENTPLSTGAVISGRSPDIFCEIKTEDEDIYSDEQVGVSSPGKGSFQDSFAELHREPIEYDGCQQHSGVIPQPIELKDVSDDSCELANSIKAYCLDDIILQNKTNDSLSSLDITDEMSNCHKTSGNITNLDEDKSSVVNDYLVCSVNMSCEDHIDIDEYWYPRDLHGSTLESTKTIESSTDQCNAEVGSPSVVIQSDLCGSAESNFTSLAEVVQMKADGQFDSLVQHSVGTKDVLPIDVGLATNDCTFAFNKTLDSVKAANFTTQDGRLESIVYDALNNHAQRKSTETETPVGVSGAAIISSPFVSEGTDREPTGSKAPHGGQLLLPCVTEWLSKDIDQLKVTVDDDICKTNSDQGSREQFGLQPQLLQSCSDLDKVCVTSESSSPEETQEMPAGSLDSTAASLDTDGQSEKLQPFIDEGALEEHAPKKLLSKRKIMSPTSQEKLCSALTGIDLCGVQRLKRKILLEDYGKTRRPNGRSSLSPTSKGILKGTESPSPQKTTCTCMKAASVILDAEKAVEFSQRQMHDIENIASKLMRSLNHMRSIVDGNLLSESHSLLPTFNTAEIRAASEDALEVERTTRKWLTIMNKDCNRFCKILRLAGKKAVSHSEVPRKRKKITFADETGGKLCHVKMFTDGQNSLLSECHSE</aaseq>

Gene Sequence

<dnaseqindica>1..601#813..2161#2253..2328#2423..2736#3904..4002#4098..4250#ATGCCTGGTGCTGCTTGCAAAAAGATTAACCTGATTTCTCCTAGGCGATCTCCTAGGCTCAAGAATATCCGTGTTATATATGGTGAACATTCTGAAACGAACTATCCTACCTTGAGGCCTGTCAAAACTGAGGTCATCGATCTTGAAGAAATTGCATCTCCTTCCAACCCAGAATTTAATGATGATTCTGTTGGTGACGAAGACTTTCAGAATGTGTCTCTGAAGGATTTAAGAGCTCAGTGTAAAGCTAAGAACAGGAGGGCCTTGAAAGTTGATTCTGAAAGACCTGACTTTAAGAATCAGAGACAATGTGGAAAGAGAAACCTTGAAGATGAAGTACCAAAAGAGGAAGTTGATCTTGATGAGCCCATTATTGCATTCAGACAGAAGCGGCAGAAGACATCCCCTACCAAATCAAACAGAACAATGGGCAAACCAATATCTCTAAATGCTGTAAAACTGCAAGATACAACATTGAGGAGAGAGGAGACTGAGCCTATAAAATTACCCCCACTTGAGGTAACATCACATGACTCTATGTCAACTGCAGAGAAGATGGAAAGGAGTGCTGCAGATGTAAAACACTCCACAATTGCTGCTGGTGAGTCTTTTCTTATCCAAACATACTGCAGTCTTTCAATACAAATACCCTTTTTTCAGTATAGATGCAACGTATGAATGAACTGGATGTAGCAGATGAATCTGCAAAACCTCTTTCTTATTTTCGCCAGTACATTTTTCTTGAAATAGACCTACTTAGGTTCCTTTTTTTCAAACATATTGTAAATTCTGTGTATGTTCTTTATTTTCAGGTAATACTGAAGAAATAGTTGGGGAGAACATTTTATATGCTGAAATGGAAAACACACCATTATCAACTGGTGCTGTAATAAGTGGTAGAAGCCCAGACATATTTTGCGAAATCAAGACTGAGGATGAGGATATTTACTCTGATGAGCAAGTTGGAGTATCTAGTCCAGGAAAGGGCTCCTTTCAGGACTCATTTGCTGAGTTGCATAGGGAGCCAATAGAGTATGATGGATGTCAACAACACAGTGGTGTCATCCCTCAACCAATTGAACTAAAGGATGTTTCTGATGATTCCTGTGAGCTAGCTAACAGTATCAAAGCATACTGTTTGGATGACATTATACTGCAAAACAAGACAAATGACAGTCTTTCTTCATTGGATATCACTGATGAAATGAGCAACTGCCATAAAACATCAGGCAATATAACAAATTTAGATGAAGACAAGTCTTCAGTTGTCAATGATTATTTGGTATGTTCTGTTAATATGTCTTGTGAAGATCATATAGACATCGATGAATACTGGTATCCACGAGATCTACATGGCAGTACACTGGAAAGCACAAAGACTATAGAAAGTTCTACTGATCAGTGTAACGCAGAGGTGGGGTCTCCATCCGTGGTCATCCAATCTGATTTATGTGGAAGTGCAGAAAGCAACTTCACGTCGCTTGCAGAGGTTGTGCAGATGAAGGCAGATGGTCAATTTGATTCACTAGTTCAGCACAGTGTTGGAACAAAGGATGTATTACCTATTGATGTTGGACTTGCAACTAACGATTGCACTTTTGCTTTTAACAAGACTCTTGACTCAGTGAAAGCTGCCAATTTTACCACACAAGATGGACGGCTAGAAAGTATAGTATATGATGCTCTGAATAATCATGCACAGAGGAAGAGTACTGAAACTGAAACTCCTGTTGGTGTCTCAGGTGCTGCCATCATTTCAAGCCCATTCGTAAGTGAGGGCACTGACAGAGAACCCACTGGATCCAAAGCTCCACATGGTGGTCAGCTCTTACTTCCTTGTGTTACAGAGTGGTTATCAAAGGATATAGATCAGTTAAAGGTTACAGTGGATGATGACATCTGTAAAACTAACAGTGATCAAGGATCAAGAGAACAATTTGGCCTTCAGCCGCAGTTATTACAATCTTGTTCTGACTTGGACAAAGTTTGTGTAACATCAGAGAGCTCGAGTCCTGAAGAAACACAGGAAATGCCTGCTGGGTCTTTGGATTCAACTGCAGCCTCTCTCGATACTGATGGACAAAGTGAAAAGTTACAACCTTTCATTGATGAAGGAGCTCTTGAAGAGCATGCTCCAAAAAAACTGCTGTCCAAGAGAAAGGTCTGCTCTCATTGTTTTAACCTAACCTTGAAACAAAAAATGTATGAATAAATCTGCCATACTTATTTTCCCTTTTTTTATTTTTTTTAAGATTATGTCCCCGACTTCTCAGGAGAAGCTTTGCAGTGCTTTGACTGGTATTGATTTGTGCGGGGTCCAAAGGCTCAGTAAGCAATCTATGCTGTTTGTAGTGTTTCTAATATTTTTTATAAGAGTAGTTAATACTATTTCCCATTATTGATGCGGCCATTATTCTTTCAGAGAGAAAGATCCTTCTTGAAGATTATGGCAAGACGAGGAGACCCAATGGCAGGAGTTCCCTCTCCCCTACAAGCAAAGGAATTCTGAAGGGAACAGAATCCCCATCCCCCCAAAAGACTACTTGTACTTGCATGAAAGCTGCTTCAGTTATATTGGACGCCGAGAAGGCTGTTGAGTTTTCACAAAGGCAAATGCATGATATAGAAAACATTGCATCCAAACTTATGAGAAGCTTGAATCACATGAGAAGTATAGTAGACGGAAATTTGTTATCAGAATCACATTCTTTGCTACCTACTTTCAACACTGCTGAGGTGAGTATTAATAAATGGAATTTGAGCATACTATTTTGAGTTGCATTTAATTTTGCTGCTCTGTGATTAATTGATGATTCTAGAATATAGCTAGGCTGTAGTAATCATGATTCATGAAGTTACACCGTACACACTTTAATAGGTAGGGCAGAAGTATAAAGTTGAGTTTTCATTAGCTAAAGAAATGAAGTCACACTGTTAGACACTGGAGCACAAAAATATATTTCTCAGTATAATAATTCTAGTTCAAATATTAATACTGGTTGAAGAATCCTTACTTGGATATCGAAAGTTCCGCAGGAAATTTCAGATACCCCATAAACATAAGAGTCTGCATTTGTGTTTGCACTTCATTAGCGCCTTAGTTATTTTTATGTAAATATCACATAAGTACCTATCTAAGCTTGTGGACCAGCTATTGTATTGTAGGATCAGTACAAGAGTCTCGTTGCATAGAATCACCGTGGACTAATCTGCAGTTATACTGTCATACAAGGAATTATGTCCCATCTTACAACCGCATTTCACGAATGTCCAAAAAACAACTCTATTCTTAATAGTAGTTCAGGTTCGAACAAGTGCACAGTATAGAAGTTCAAGTTGTTTTTAGTCTTTGAAAGTTCAGGGTTGTCAAATAGACTATTCCTAAAAAGGAGCATATTCCTGACTGGCTTATCAACACTTAACATATGTACTTCATACCTTTGTCCTATTAATAGTGCAGGTGTAACTTTTCATCTGTTTTCAACTAGTGATTACTCCTAACTTTCAAAAAAGTTCCATGTTTCACATTATAAGACATTTTGGGTTTTGAATAGATTCATGCATGGATCTATGTATGTGCTTCATATATGTGTCCAAATTTATATGGATGTTAGTGAATCTAGGGATGGGGAGGCCAAAACATCTTATAATGTGGAACAGAGGGAGTAGTACTTTATTTGCCATAAGAAATTGTGAACTAACTCTGATATGATAAGATTGTTGAAATTGATATTAACCATGATGAGCAGTAGCTTCCTGGTAGTCTTGTTCATAATATGAAAAATGAGAAGATGTGAGAGTTGAGCCTATAGATTTGTTTGCTGCCAATCTGGTCTTAGCTGAGAGTGAAGCAAATCTACCTTGATATTTATTTGACAGCAATCTTATAATTCTCTTGCGCAGATCAGAGCAGCCTCTGAGGATGCATTAGAGGTGGAGAGAACTACAAGGAAATGGTTGACAATAATGAACAAAGATTGCAACCGCTTTTGTAAAATACTGGTTGGTATCTGCTTTTAAGTTTGTATGCTAACTTTGGAGTATTGAGTGTTTTCCTGAACTCGACTGACATTTTCAATTTAAATGTTCAATGCCAGAGATTAGCAGGGAAGAAGGCTGTTTCTCATTCTGAAGTTCCAAGAAAACGAAAGAAGATAACATTTGCGGATGAAACTGGAGGAAAGCTCTGTCATGTTAAGATGTTTACTGATGGACAAAACTCTCTTCTTTCTGAATGCCATAGCGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010321