BGIOSGA010344

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Revision as of 09:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010344| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010344, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA010344

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010344, complete gene.

LocusTag

OSJNBB0085A04.1

Ensembl Transcript ID

BGIOSGA010344-TA

Ensembl Protein ID

BGIOSGA010344-PA

Length

5755

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24585076..24590830

Sequence Coding Region

24590534..24590830,24590311..24590454,24590150..24590233,24589618..24589743,24589469..24589528
,24589274..24589327,24589093..24589185,24588373..24588468,24588010..24588155
,24587636..24587782,24587419..24587548,24586434..24587348,24586263..24586361
,24585434..24586183,24585076..24585324

Genome Context

<gbrowseImage1> name=IndicaChromosome03:24585076..24590830 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:24585076..24590830 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGCTGAGGCGGAACCTGAAGCGGCAGGCGTCGCGGTCACTCTCCGCCTTCGCCGTGTCCTCGCCGCGGGCAGGCGCTGTCGCCGCCGCCGACGCCGACCAGGAGAACCTCCACCCAAACCTGGCCGCCGCCTCGCCGCCGATGTCCCCCGCCGCCAAGAACTCCTCGGCGGCGCCGGGCGCGTCGCCGCGGTCGTCGAAGCCCGTCCCGACCAGCGCTGCTCCTCCCTCGAAGGCCGCCGCCGAGGGGGAGCAGGCTTCTGCGCCCGCCAACGAGGCACCCGCCGTGAAGGTGGTGGTCCGGGTGCGGCCGACGGTGAGCCGGCCGGTGGACGGCAAGGATCTGTTCTTCGTCCGCAAGACCTCCCCCTGCTCCGTCGCCGTCGGCGATCGGTCGTTCGCCGTCGATGGCTTCCTCGACGACAGAGCCTCTCAGGCGGATGCTTTCGATCTGATTGGCGTGCCCATGATCGAGAGCGCCCTCGCTGGATTCAACTCCTCCCTCGTGTGCTACGGCCAGAGCGGCACAGGGAAGACGTACACCATGTTCGGTGCCCTCGCGGCCATGGTTGACAGCAGCTCAGACCACGCCGACAGGGGCGTCGTTCCTCGCGTCTTCCAGAACCTCTTCGCTCAAATCCAAGGCAGGCAAGAGAGCTCACCGGAGAAGCAGACAAGCTACCAATGCCGGTGCTCATTTCTTGAGGTACATAATGAACAGATTAATGACCTGTTGGATCCATCTCAGCGTAACCTTCAGATAAGAGAGAATGCTGGCAATGGTATCCATGTTGAGAACTTGACCGATGAGTATGTGTCAACGGTTGAGGACGTCAATCAGATCTTGATGAAGGGCCTTTCAAACAGAAAAGTTGGTACTACGAGTATGAACTTGAAGAGTTCACGTTCTCATGTGATATTCAGTTGTGTCATTGAAGCATGGAGCAAGGGTTTCTCAAATGGCTTCAGCAGCTCACGGACCAGCAGAATTACCTTCGTTGATCTTGCTGGTCCTGATAATGATGAACTTGATGGTGGCAACAAGCACTGTACAAGAGAAGAAAGATATGTTAAGAAGTCCTTGTCAAAGCTTGGGAAACTCGTCAATATTCTATCAGAAGCACCAGAGACCCAGAAAGATGACTCTCCCCACAAGCAATCCTGTTTGACGCATGTGCTGAAGGATACACTAGGTGGAAATTCAAGGGTTACATTCTTGTGTTCCATTTCTTCAGAACACAGGTGCAGAACTACAACTTTAAGCACGCTACGGTTCGGTGAGAGAGCGAAGCTCATGTCAAACAAGGCTGTAGTAAATGAGATATCAGAAGATGATGTTAATGGTTTGAGCGATCAAATACGTCAGTTGAAGGACGAGCTCATACGAACAAAATCTGGAGACACTGAACCCTGCAAGAATGGGTATTTCAGTGCACAGAATGCCCGTGAAAGCCTGCATAATTTGCGAGTCAGTCTCAATCGCTCTCTAATCTTGCCTCACATAGAAGTTGATTCAGAGGAAGAGATGGATGTGGATGAAGAGGATGTACAAGAACTGCGTGACCAAATAAGAAAGCTTCATTCCTCATCTGAAGACACTTTCGATGACTTCATGGATGCAGAGAGTGGTGATGACACTCCTTGCTCTAAGGGGAATCCAAAAACAAGTGAGGAAGATGATCAGCCTGTAATAGATGATTGTGAAGACCCGATTCAGGAAGAGCATGAAGTGTTGTCCAGTACAAAAGTTGATCAAGACCTTGTGTCTGACAGGAAATCTTTTCTATCAGTTAGTGCCTCCCCGCACCTGTCACCAATGCAAGACCCTACGTTATGTTCTTCTCCAAAGATTCACAACAAGGCTAGAAAAAGCATTACCTCACCAGGGCTGTCACCAAGCAAACTTAGTGTATCTGATTGTCCTGGTGATGAAGTGTCCAGAAAAAGTGCAGTTCGTTCTTCTTTACAGTCAAGCAAGCTTAGCCCAACTGATTCACTGGCTGCAAGTCTCCAACGGGGCTTGCACATTATGGAGTACCATGAACAGAACCAAGGCCCAAGAAAATCATTTGTTGGCCTTTCATTTGATCATTTTGCACTGAACCCCCGTCAATCAGTTGCAAAAGTCAGTTCAGGAGTTCTGGCATCACCAGAGAGGAAAGGAGCAACATCTTCTGCTCTTTGTTCATCCTGCAAAAAAGCGATCGACACTGATGGGAACCAAAAAGATAATATAAATGCAGAAAAGCAGATTGTAATAGCCACCAGTGTGGTACCAGAAGTTAAGGACGACATCACCGCATCAACAATTGCTTCAAAGAGACAGACTGAACTTGAAGCTTTATGTGAAGAACAGGCCGATAAGATCAAGGAGCTGAGCAATTTGGTTGACCAATATAAGAAGTGTTCAGAAGATGCTCAAAATTCAGATGGTACGGAACCTACAAAAGAACTAGTGGATGAAGCCAAGGTTGGTGAACAACATGGTGAGCTGAATGTGAATGACAGGGAAGAACTTCTTAGTGAAATTCAGAGGTTGAAGGATCAACTGAAACAACAAGCAGGTGAATCCACAAATGTCAGCCTTCTGGAACATTTGAGGAATGGCAGCACAGACCAAGAATATGAGCTAGACAGAGAAAGGGAGAAATGGATGGAGTCTGAAAGCAAATGGATATGCCTAACTGAAGAGCTGAGAGTTGATCTTGAATCAAATCGGATGCTTGCAGAGAAAACAGAGATGGAGCTTAGCAATGAAAAGAAGTGCACTGCAGAACTGGATGATGCCCTCCAACGAGCCATCTACGGCCACGCCAGGATAATTGAACATTACGCCGAGCTCCAGGAGATGTACAATGATCTTCTTGAGAGGCACCGCCGTGTGATGGAAGGTATCTCAGAGGTGAAGAGGGCAGCTGCCAAGGCAGGCAGGAAGGGCTGCGGGACGGCTTTCGCTGCTGCCCTTGCAGCAGAGCTGTCCACAGTGAGGATTGACCGTGAAAAGGAAAGAGCGCAGCTGAAAGAGCAGAACAGAAGGCTCCGCATTCAGCTTCGCGACACAGCTGAAGCTGTCCATGCTGCTGGAGAACTTCTTGTAAGATTGAGAGAGGCAGAGGAGGCATCCACACAAGAAAAGGAGAGGAGTGCAGCGATGCAGCAGGAGAACGACAAGCTCAAGAAGCAGCTGGAGAAGATGAAGAAGAAGCACGAGATGGAGATGGAGACGATGAAGCACTTCCTTGCGGACAGCCGGCTGCCGGAGTCAGCACTGGGGGGATTCTACCGGCAGGAGAGCGAGGATGTACCGGAGTACAACAACCATGCCACTTCTACATGCGACGATGATCAATCTTGGCGTGCTGCGTTTACATCTGCATATGAATGA</cdnaseq>

Protein Sequence

<aaseq>MEMLRRNLKRQASRSLSAFAVSSPRAGAVAAADADQENLHPNLAAASPPMSPAAKNSSAAPGASPRSSKPVPTSAAPPSKAAAEGEQASAPANEAPAVKVVVRVRPTVSRPVDGKDLFFVRKTSPCSVAVGDRSFAVDGFLDDRASQADAFDLIGVPMIESALAGFNSSLVCYGQSGTGKTYTMFGALAAMVDSSSDHADRGVVPRVFQNLFAQIQGRQESSPEKQTSYQCRCSFLEVHNEQINDLLDPSQRNLQIRENAGNGIHVENLTDEYVSTVEDVNQILMKGLSNRKVGTTSMNLKSSRSHVIFSCVIEAWSKGFSNGFSSSRTSRITFVDLAGPDNDELDGGNKHCTREERYVKKSLSKLGKLVNILSEAPETQKDDSPHKQSCLTHVLKDTLGGNSRVTFLCSISSEHRCRTTTLSTLRFGERAKLMSNKAVVNEISEDDVNGLSDQIRQLKDELIRTKSGDTEPCKNGYFSAQNARESLHNLRVSLNRSLILPHIEVDSEEEMDVDEEDVQELRDQIRKLHSSSEDTFDDFMDAESGDDTPCSKGNPKTSEEDDQPVIDDCEDPIQEEHEVLSSTKVDQDLVSDRKSFLSVSASPHLSPMQDPTLCSSPKIHNKARKSITSPGLSPSKLSVSDCPGDEVSRKSAVRSSLQSSKLSPTDSLAASLQRGLHIMEYHEQNQGPRKSFVGLSFDHFALNPRQSVAKVSSGVLASPERKGATSSALCSSCKKAIDTDGNQKDNINAEKQIVIATSVVPEVKDDITASTIASKRQTELEALCEEQADKIKELSNLVDQYKKCSEDAQNSDGTEPTKELVDEAKVGEQHGELNVNDREELLSEIQRLKDQLKQQAGESTNVSLLEHLRNGSTDQEYELDREREKWMESESKWICLTEELRVDLESNRMLAEKTEMELSNEKKCTAELDDALQRAIYGHARIIEHYAELQEMYNDLLERHRRVMEGISEVKRAAAKAGRKGCGTAFAAALAAELSTVRIDREKERAQLKEQNRRLRIQLRDTAEAVHAAGELLVRLREAEEASTQEKERSAAMQQENDKLKKQLEKMKKKHEMEMETMKHFLADSRLPESALGGFYRQESEDVPEYNNHATSTCDDDQSWRAAFTSAYE</aaseq>

Gene Sequence

<dnaseqindica>1..297#377..520#598..681#1088..1213#1303..1362#1504..1557#1646..1738#2363..2458#2676..2821#3049..3195#3283..3412#3483..4397#4470..4568#4648..5397#5507..5755#ATGGAGATGCTGAGGCGGAACCTGAAGCGGCAGGCGTCGCGGTCACTCTCCGCCTTCGCCGTGTCCTCGCCGCGGGCAGGCGCTGTCGCCGCCGCCGACGCCGACCAGGAGAACCTCCACCCAAACCTGGCCGCCGCCTCGCCGCCGATGTCCCCCGCCGCCAAGAACTCCTCGGCGGCGCCGGGCGCGTCGCCGCGGTCGTCGAAGCCCGTCCCGACCAGCGCTGCTCCTCCCTCGAAGGCCGCCGCCGAGGGGGAGCAGGCTTCTGCGCCCGCCAACGAGGCACCCGCCGTGAAGGTAAAGTTCGCCGGCTCGCCGGAAATCCCTTTCCTACCAAGTTGTGAGCCTCTCCTGATGCGCGAGAGGTCGTGTGCAGGTGGTGGTCCGGGTGCGGCCGACGGTGAGCCGGCCGGTGGACGGCAAGGATCTGTTCTTCGTCCGCAAGACCTCCCCCTGCTCCGTCGCCGTCGGCGATCGGTCGTTCGCCGTCGATGGCTTCCTCGACGACAGAGCCTCTCAGGTTTGCATTATTCCCATTCCTCCAATTCCAGGTGCTCTTGAACGAATCCTGTGATGAATCTTGGTGTTCCCTGGCAGGCGGATGCTTTCGATCTGATTGGCGTGCCCATGATCGAGAGCGCCCTCGCTGGATTCAACTCCTCCCTCGTGTGCTACGGCCAGGTACCTCCTCTGATTCATCCTTCCTGTTCAGTTTGGAGTTATGTTTTTTTTTTCTTCTTTCTGCGTTACTGCTTCTTGTTGGAGTGTATAAAGTGAATTGCCCGCCTTTCCCTATCAGCTTAGGCTTTTAGGTGCAATTGGCTGGTACATGCAACTTAATATGGGCTCAGAGCCAGAGGTCTCGAGTTCGAATCCTGGCTGGCGCGCAATTAAATAAAATAATTGCAGCCCACTCCAATATTCCACGCTTAAGATTTGAGGGGGTCTCGCGTGAGGGGGAGTGTTGGAGTGTATAAAGTGAATTGCCCGCCTTTCCCTATCAGCTTAGGCTTTTAGGTGCAATTGGCTGGTACATGCAACTTAATACTTCTGAAACTTTGCTTTTGTGTGTTGGAATTGTGGTTAGAGCGGCACAGGGAAGACGTACACCATGTTCGGTGCCCTCGCGGCCATGGTTGACAGCAGCTCAGACCACGCCGACAGGGGCGTCGTTCCTCGCGTCTTCCAGAACCTCTTCGCTCAAATCCAAGGCGTAAGGCATTTTCTGCCGTCTGGTTTTGTAGAAATTTGATTAAACCTGTGATTTCCTTGTGGTCTCAATGCTGTTCTTTCCTGGTGCAGAGGCAAGAGAGCTCACCGGAGAAGCAGACAAGCTACCAATGCCGGTGCTCATTTCTTGAGGTGAGTAGTGACTCATCTGCTCGTTCTCAATTGAACTGAAAAATGCATCTATAGATGCGTGTTTTTGTTTTCCCTGAAGTTCAGCTTTTAAACTATGTTTCCAGATCTGACATGGTGCAAATTTTGCTCTATGCTTTCCAGGTACATAATGAACAGATTAATGACCTGTTGGATCCATCTCAGCGTAACCTTCAGGTATATTCTAATCTTGAGCAAGAAACTAACTCTGCATTTGGCGTATGCTTATGGATTGCAGTAAACTTATCCAACTCCGTTATTTTAGATAAGAGAGAATGCTGGCAATGGTATCCATGTTGAGAACTTGACCGATGAGTATGTGTCAACGGTTGAGGACGTCAATCAGATCTTGATGAAGGTATGATCAAAATGACTTCCACCTCACTGCATTATCTGTCTACTTGTAGACTGTGATGCTTTACAGATTTGTTCAGGAAGTTGCTGCACTAATTTGCAGATTTCTGTCAGAAAACATAGCTAGGGATTTGTAGCTTGAAGTCAGCATTATGTGAAAAAATGTTGGAAGTTATTTACAGCTATTTACATGATTGTTTCGTTAAGATCCAAAACATTTTGCTTAGCTGGTGCTAACTTATGGGCACTGGTCAAGTTGTTCCGAAAATCATCTTTATTCTTTTATGGCACGGAGTTATCCAATAAAACCAACCCAAGAAATTGCTTCTACTATACTTCAAATCAGTGGGACAATTTTGATCTATGTTGCTTCACATCAGCAGCAGAAAGAAATTGTCCATTCTATTTTGCTTTTAAAATTAGGGTTTCTTTGCTTTTCATTTCACCTCTGCATAGATGAGTATCACAACCAGGACTTCTGCTTGAGCTTGTTTAGATCGCATATATTAGTACTTGTATCATGCTCACTCAAAACTATTTGTTTCATGTTGTACTTCTAACAACTGAACCCCACTACCTTCTCCTCCAGAATTATTGATTGCTTGTCTGAGCTTGCTTTTCTTTACAGGGCCTTTCAAACAGAAAAGTTGGTACTACGAGTATGAACTTGAAGAGTTCACGTTCTCATGTGATATTCAGTTGTGTCATTGAAGCATGGAGCAAGGTAAATTAAACCTCTCTTATTTCTTCTGTTATTTGGAGACCTCATAGCCAGCTATATTTAACTTCTATTATTGCAATAATAATGTCAGTATTATAGCATTTAGAAAATCAGTCTGCTCTTTGGTCTATTCTATTCTGTTTTTTAAGTTCACTAATTGATCAGCAAATATACATGTTGTCATTATATTGGGAATTTACTTTGTTCAACCAAATTACAGGGTTTCTCAAATGGCTTCAGCAGCTCACGGACCAGCAGAATTACCTTCGTTGATCTTGCTGGTCCTGATAATGATGAACTTGATGGTGGCAACAAGCACTGTACAAGAGAAGAAAGATATGTTAAGAAGTCCTTGTCAAAGCTTGGGTATGTAAATTTATAAGATGGCTTGTTTGGCAGGAATTTTGATGTCTCATGAAAATTCATCAGTAAAATTTCTTCAATGTTTCTTTTTCATGTTCACCGATTTCTCCCTCATAATCTGTTTGCATATAGTGATAATTGCTTTCTTTGGAGAAATATATTATAAACATATAGTGATAAGAATAAAAACATGTAGTAAAGCAGAAGACTGACTTACATTGTTACTTCAGGAAACTCGTCAATATTCTATCAGAAGCACCAGAGACCCAGAAAGATGACTCTCCCCACAAGCAATCCTGTTTGACGCATGTGCTGAAGGATACACTAGGTGGAAATTCAAGGGTTACATTCTTGTGTTCCATTTCTTCAGAACACAGGTATTTTCTGTTCATTACCTTATGTACTTCACTATGCCATTTACATTCTCTTAAGTTGACATAGAGTCCTGTGACTGGCAAATGCAGGTGCAGAACTACAACTTTAAGCACGCTACGGTTCGGTGAGAGAGCGAAGCTCATGTCAAACAAGGCTGTAGTAAATGAGATATCAGAAGATGATGTTAATGGTTTGAGCGATCAAATACGTCAGTTGAAGGTATTTCCTCAGCAGCAGATAAAAGTGGCAACAATTTACAGACACTTGCTAATTGTTCTATCACTTGCAGGACGAGCTCATACGAACAAAATCTGGAGACACTGAACCCTGCAAGAATGGGTATTTCAGTGCACAGAATGCCCGTGAAAGCCTGCATAATTTGCGAGTCAGTCTCAATCGCTCTCTAATCTTGCCTCACATAGAAGTTGATTCAGAGGAAGAGATGGATGTGGATGAAGAGGATGTACAAGAACTGCGTGACCAAATAAGAAAGCTTCATTCCTCATCTGAAGACACTTTCGATGACTTCATGGATGCAGAGAGTGGTGATGACACTCCTTGCTCTAAGGGGAATCCAAAAACAAGTGAGGAAGATGATCAGCCTGTAATAGATGATTGTGAAGACCCGATTCAGGAAGAGCATGAAGTGTTGTCCAGTACAAAAGTTGATCAAGACCTTGTGTCTGACAGGAAATCTTTTCTATCAGTTAGTGCCTCCCCGCACCTGTCACCAATGCAAGACCCTACGTTATGTTCTTCTCCAAAGATTCACAACAAGGCTAGAAAAAGCATTACCTCACCAGGGCTGTCACCAAGCAAACTTAGTGTATCTGATTGTCCTGGTGATGAAGTGTCCAGAAAAAGTGCAGTTCGTTCTTCTTTACAGTCAAGCAAGCTTAGCCCAACTGATTCACTGGCTGCAAGTCTCCAACGGGGCTTGCACATTATGGAGTACCATGAACAGAACCAAGGCCCAAGAAAATCATTTGTTGGCCTTTCATTTGATCATTTTGCACTGAACCCCCGTCAATCAGTTGCAAAAGTCAGTTCAGGAGTTCTGGCATCACCAGAGAGGAAAGGAGCAACATCTTCTGCTCTTTGTTCATCCTGCAAAAAAGCGATCGACACTGATGGGAACCAAAAAGATAATATAAATGCAGAAAAGCAGATTGTAATAGCCACCAGTGTGGTACCAGAAGTTAAGGTATATTACGTGATGGCAAACTTCTACCCATATTCTTGTTTTTCCATGTACTAAAACATTTTCTTCATCCAGGACGACATCACCGCATCAACAATTGCTTCAAAGAGACAGACTGAACTTGAAGCTTTATGTGAAGAACAGGCCGATAAGATCAAGGAGCTGAGCAATTTGGTACGAAGCATGGTGAACTAAGGAATAGTATGCTTCAGGCATGATACCATTTCCTGACATTTTCAATGTTACATTGCAGGTTGACCAATATAAGAAGTGTTCAGAAGATGCTCAAAATTCAGATGGTACGGAACCTACAAAAGAACTAGTGGATGAAGCCAAGGTTGGTGAACAACATGGTGAGCTGAATGTGAATGACAGGGAAGAACTTCTTAGTGAAATTCAGAGGTTGAAGGATCAACTGAAACAACAAGCAGGTGAATCCACAAATGTCAGCCTTCTGGAACATTTGAGGAATGGCAGCACAGACCAAGAATATGAGCTAGACAGAGAAAGGGAGAAATGGATGGAGTCTGAAAGCAAATGGATATGCCTAACTGAAGAGCTGAGAGTTGATCTTGAATCAAATCGGATGCTTGCAGAGAAAACAGAGATGGAGCTTAGCAATGAAAAGAAGTGCACTGCAGAACTGGATGATGCCCTCCAACGAGCCATCTACGGCCACGCCAGGATAATTGAACATTACGCCGAGCTCCAGGAGATGTACAATGATCTTCTTGAGAGGCACCGCCGTGTGATGGAAGGTATCTCAGAGGTGAAGAGGGCAGCTGCCAAGGCAGGCAGGAAGGGCTGCGGGACGGCTTTCGCTGCTGCCCTTGCAGCAGAGCTGTCCACAGTGAGGATTGACCGTGAAAAGGAAAGAGCGCAGCTGAAAGAGCAGAACAGAAGGCTCCGCATTCAGCTTCGCGACACAGCTGAAGCTGTCCATGCTGCTGGAGAACTTCTTGTAAGATTGAGAGAGGCAGAGGAGGCATCCACACAAGAAAAGGTTTGTTCAAAGACACAGATAACAATTCAATTTGCTTGCTTAAACTATGTTCTGCTGAACACTACAAGTACACAGATAACAATTTGATTTGCTCGCTTTGGATTTGCAGGAGAGGAGTGCAGCGATGCAGCAGGAGAACGACAAGCTCAAGAAGCAGCTGGAGAAGATGAAGAAGAAGCACGAGATGGAGATGGAGACGATGAAGCACTTCCTTGCGGACAGCCGGCTGCCGGAGTCAGCACTGGGGGGATTCTACCGGCAGGAGAGCGAGGATGTACCGGAGTACAACAACCATGCCACTTCTACATGCGACGATGATCAATCTTGGCGTGCTGCGTTTACATCTGCATATGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010344