Os09g0376700

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0376700| Description = Zinc finger, RING-type domain containing protein| Version = NM_001069579.1 GI:115478900 GeneID:4346916| Length = 132...")
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Gene Name

Os09g0376700

Description

Zinc finger, RING-type domain containing protein

Version

NM_001069579.1 GI:115478900 GeneID:4346916

Length

1325 bp

Definition

Oryza sativa Japonica Group Os09g0376700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13242510..13243834

Sequence Coding Region

13242604..13243782

Expression

GEO Profiles:Os09g0376700

Genome Context

<gbrowseImage1> name=NC_008402:13242510..13243834 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13242510..13243834 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagatcgagctgctgcattgtcatggcgggaaggtttcttctcggcggccgggagatcgtcaggacgggggatgatggcccgttggatgatggtcctgccgtggcgccggcggcggggtcgtcggcgccggcgacgtctgcggcggcggcgagggtgacgccggcggtgctgttcatcacggtggtgctggcggtggtgctgctggcgtcggggctgctgcacgtgctgcggcggctgttcctcaagagccaccgcgccaacgccagcgccgaggcggtggagcgccagctgcagcagctcttcagcctccacgaggacggcgccggcggcgcggggccggggctcgatcaggccgccatcgacgcgctgccggcgttcacctacgccgagctgctcgccggcgccgccgcgcccaatggcggcggcgggaacgggaagaggcagttcgactgcgccgtctgcctctgcgagttcgacggcggcgaccgcctccgcctcctcccgctctgcggccacgccttccacgccgcctgcatcgacacctggctccgctccagctccacctgcccgctctgccgcgccgcgctctccgcccgcgccctcgccgccctcgccgccgccgccgcggacacccccgccgccgcgcaacaccgccagcccgacgtcgaggaccagaagctggaccaccaccacccgccgccgccgtccgacgagcccgcgaccagcttcgtgctctccgtcaggctcggccggttcaagaacacgcagcgcagcgacggcgacgccgacgcgagcggcggcggcagccgctgcatcgacgcgcggcggtgctactccatgggctcgtaccagtacgtgctcgccgacgacaacctgctgatctccgtgcactggcgccccggcgatggcattagcgccgccaccgccgccgccgccgcgggcgccaatgtcgccacggcgcgcactggcattaagcagggcggcggcggcggaggcggcaagaaggtgttcggccgaggcgacagcttctcgatgtccaagatctggcagtggcgcggcggcgacaggaggctcccagtcctccactccgacgcctcgccgccggcggacgacggcttgccgtgggcgacggcggcggcggcgagcacgcgaacgaggcaagaaagcgacacctga</cdnaseq>

Protein Sequence

<aaseq>MRSSCCIVMAGRFLLGGREIVRTGDDGPLDDGPAVAPAAGSSAP ATSAAAARVTPAVLFITVVLAVVLLASGLLHVLRRLFLKSHRANASAEAVERQLQQLF SLHEDGAGGAGPGLDQAAIDALPAFTYAELLAGAAAPNGGGGNGKRQFDCAVCLCEFD GGDRLRLLPLCGHAFHAACIDTWLRSSSTCPLCRAALSARALAALAAAAADTPAAAQH RQPDVEDQKLDHHHPPPPSDEPATSFVLSVRLGRFKNTQRSDGDADASGGGSRCIDAR RCYSMGSYQYVLADDNLLISVHWRPGDGISAATAAAAAGANVATARTGIKQGGGGGGG KKVFGRGDSFSMSKIWQWRGGDRRLPVLHSDASPPADDGLPWATAAAASTRTRQESDT </aaseq>

Gene Sequence

<dnaseqindica>95..1273#cgacgacgacggcgacgacgagtactacgatgatgttctaggtagaccgatcgagctggttgacgacgccattttgtgttcttggatttattggatgagatcgagctgctgcattgtcatggcgggaaggtttcttctcggcggccgggagatcgtcaggacgggggatgatggcccgttggatgatggtcctgccgtggcgccggcggcggggtcgtcggcgccggcgacgtctgcggcggcggcgagggtgacgccggcggtgctgttcatcacggtggtgctggcggtggtgctgctggcgtcggggctgctgcacgtgctgcggcggctgttcctcaagagccaccgcgccaacgccagcgccgaggcggtggagcgccagctgcagcagctcttcagcctccacgaggacggcgccggcggcgcggggccggggctcgatcaggccgccatcgacgcgctgccggcgttcacctacgccgagctgctcgccggcgccgccgcgcccaatggcggcggcgggaacgggaagaggcagttcgactgcgccgtctgcctctgcgagttcgacggcggcgaccgcctccgcctcctcccgctctgcggccacgccttccacgccgcctgcatcgacacctggctccgctccagctccacctgcccgctctgccgcgccgcgctctccgcccgcgccctcgccgccctcgccgccgccgccgcggacacccccgccgccgcgcaacaccgccagcccgacgtcgaggaccagaagctggaccaccaccacccgccgccgccgtccgacgagcccgcgaccagcttcgtgctctccgtcaggctcggccggttcaagaacacgcagcgcagcgacggcgacgccgacgcgagcggcggcggcagccgctgcatcgacgcgcggcggtgctactccatgggctcgtaccagtacgtgctcgccgacgacaacctgctgatctccgtgcactggcgccccggcgatggcattagcgccgccaccgccgccgccgccgcgggcgccaatgtcgccacggcgcgcactggcattaagcagggcggcggcggcggaggcggcaagaaggtgttcggccgaggcgacagcttctcgatgtccaagatctggcagtggcgcggcggcgacaggaggctcccagtcctccactccgacgcctcgccgccggcggacgacggcttgccgtgggcgacggcggcggcggcgagcacgcgaacgaggcaagaaagcgacacctgatagatacagctaccaacacacacacacacacacacacacacacacacacaca</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0376700, RefSeq:Os09g0376700