BGIOSGA010386

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Revision as of 09:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010386| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010386, complete gene.| tag = OsI_123...")
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Gene Name

BGIOSGA010386

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010386, complete gene.

LocusTag

OsI_12337

Ensembl Transcript ID

BGIOSGA010386-TA

Ensembl Protein ID

BGIOSGA010386-PA

Length

4349

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23733534..23737882

Sequence Coding Region

23737709..23737882,23737245..23737467,23736888..23737136,23736722..23736772,23735967..23736227
,23735704..23735756,23735131..23735251,23734776..23735030,23733895..23734688
,23733534..23733788

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23733534..23737882 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23733534..23737882 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACAGCAGCAAGCCGGTGCAAGAGGCAGCAAGCTGGAGATCGTCGCCGCCCGGGGAGGAAGTGGCGGCAGCAGCAGCGCCGGCGATGCGGAGGCGCCGCCGTTGGACGTCCTGAGGCAGGACTCCCTCTACCGCGACGCGACACGGCCGGCCCACGGCCACCATGGACAGGAGAGCTGGATGAGGACGCTGCGGCTGGGGTTCCAGTGCGTGGGAATCCTGCACGCCGACCTCGGCACGTCGCCGCTCTACGTGTACCAGAACACATTCAAGTACGGCATCAAGCACGAGGACGACATCATCGGCGTCCTCTCCCTCATCATCTACAGCTTCGTGCTATTCACCATGGTCAAGATCGTCTTCATCGCCCTCCACGCCAACGACGATGGCGACGGTGGGACATTTGCTCTGTACTCGTTGATCTCGCGGTACGCCAAGGTGTGCCTGATCCCAAACCAGCAAGCCGAGGATGAGCTGGTGACGAGGTACAACGACCACGGGAAGCCGCCGGCGACGCTGCGGAGGGCGCAGTGGATGAAGAGCCAGCTCGAGAAGAAGCCCGCCAAGATTGCCGTCTTCTTCCTCACCATCTTCGCCACCGCGCTGGCCATCAGCGACTGTGTGCTAAACCCTTCAGTCTCTGTACTGTCGGCGGTCAACGGCTTGAAACTTAGAGCACCTCATCTGACAACAGACGAAGTGGTCTGGATCACGGTGGGAATACTGGTGGTGTTTTTCGCAGTGCAACGGTTTGGCACTGACAAGATTGGCTACACATTTGCGCCGGTTGTTGTTGTGTGGCTGTTACTCATCTCAGGGATTGGCATCTATGACTTGGTCAAGTACGATGTCGGTGTCTTGAGGGCGTTCAACCCCAAATATATCATCGATTATTTCCGACGAAATAAGAAGGACGGATGGGTCCAGCTCGGTGAAGTTCTTCTTACATTTACCGGCACAGAAGCTCTCTTTGCTGATTTAGGATACTTCAGCATCAAATCAATTCAGTTAAGCTCTACCTTTGTCTTGCTCCCATCAGTGTTATGCACCTACATTGGGCAAGCAGCATACCTAAGGAAACACATGGATCAGCAGCACATACAAAACGCTTTCTTCAATTCCATTCCAAGACCTCTGTTCTGGCCAATGTTCGTTCTCGCTATCATGACGTCAGTCATCGGTTGCCAAGCCATGGTGTCTTGTGCCTTTGCAACCATGTCACACTTGCAGACACTGAATTGTTTCCCACGGATTAAGATACTGCACACATCAAGGCGTTATTCAGGACAGTTGTACAGTCCTGAAGTGAACTTCTTCCTCTGCCTACTTTCCTGTGTAATCACCTTAAGTTTCAGGACGACAGGTTTCATTGTCAAAGCACATGAAATTTGTGTGGTCCTTGTGATGGTTATCACAACTATCCTGATGACTATAGTCATGCTTCTCGTATGGAAAGTAAATATTTGGTGGATCGTTCTATTCTTTGTCGTCTTCATGTCAACGGAGACCGTCTACCTATCAGCAGTTCTCTACAAGTTCACAAAAGGACCATACATGCCCTTGGCTATGTCAGCTGTTCTAATGGTGATCATGTTCGTGTGGCACTACGTGCATGTGAAGCGATACAAGTTTGAGCTTGAACATACCGTATCACCTAATAAGGTTAGAGAGCTCCTTGAACGGCGTGATCTAAAGAGGGTTCCTGGTGTGGGGCTCTTCTACACTGAATTGGTGCAAGGCATCCCACCGATATTCCCTCACCTTATCGAGAAAATCCCGACCATTCACTCGGTAATCGTGTTCATCTCTATGAAGCACTTGCCTATCCCTCATGTCGATGTCTCGGAGCGCTTCCTCTTCCGGCAAGTGGAGCCCAAGGAGTGCATGGTGTTTCGATGTGTCGCACGATATGGATATCGGGATACTCTAGAGATGGCTGATGACTTTGTCACCACTCTTGTCGAGTACCTCCAGTACTATATCCGGGACCTAAATCTATACAACACGGTTGAGCCACTCAAGATGAGCTGCCCAAGCATTAGAATTGATAGTTTTTCCTGGGATAGACGACCCTCAGGGCATGGCATTTATGCCGAGGAGATGCTTACACCAATCCAATCATTTTCTGAGCTCACAATGCATCCTGTTGGTATGAGCAGCCGATTAGCGCAATTCCAAACAACTAAGATGAGCCTTGAAGAGATGTTGAAGATTGAGGAAGACCAAAAGTTGATCCAACGAGAAGTGGACAATGGTGTGGTTTACATACTTGGGGAGAGTGAAGTGGTAGCGAAACCACATTCCAACCTGCTTAAGAAAGTTGTTGTAAACTACATATTCAACTTTCTGAGGAAAAACTCTCGAAAAGGAGAGAAGATGTTGTCTATTCCACGCCGCAAGTTGCTCAAGGTTGGAATCACGTATGAAATATAA</cdnaseq>

Protein Sequence

<aaseq>MAQQQAGARGSKLEIVAARGGSGGSSSAGDAEAPPLDVLRQDSLYRDATRPAHGHHGQESWMRTLRLGFQCVGILHADLGTSPLYVYQNTFKYGIKHEDDIIGVLSLIIYSFVLFTMVKIVFIALHANDDGDGGTFALYSLISRYAKVCLIPNQQAEDELVTRYNDHGKPPATLRRAQWMKSQLEKKPAKIAVFFLTIFATALAISDCVLNPSVSVLSAVNGLKLRAPHLTTDEVVWITVGILVVFFAVQRFGTDKIGYTFAPVVVVWLLLISGIGIYDLVKYDVGVLRAFNPKYIIDYFRRNKKDGWVQLGEVLLTFTGTEALFADLGYFSIKSIQLSSTFVLLPSVLCTYIGQAAYLRKHMDQQHIQNAFFNSIPRPLFWPMFVLAIMTSVIGCQAMVSCAFATMSHLQTLNCFPRIKILHTSRRYSGQLYSPEVNFFLCLLSCVITLSFRTTGFIVKAHEICVVLVMVITTILMTIVMLLVWKVNIWWIVLFFVVFMSTETVYLSAVLYKFTKGPYMPLAMSAVLMVIMFVWHYVHVKRYKFELEHTVSPNKVRELLERRDLKRVPGVGLFYTELVQGIPPIFPHLIEKIPTIHSVIVFISMKHLPIPHVDVSERFLFRQVEPKECMVFRCVARYGYRDTLEMADDFVTTLVEYLQYYIRDLNLYNTVEPLKMSCPSIRIDSFSWDRRPSGHGIYAEEMLTPIQSFSELTMHPVGMSSRLAQFQTTKMSLEEMLKIEEDQKLIQREVDNGVVYILGESEVVAKPHSNLLKKVVVNYIFNFLRKNSRKGEKMLSIPRRKLLKVGITYEI</aaseq>

Gene Sequence

<dnaseqindica>1..174#416..638#747..995#1111..1161#1656..1916#2127..2179#2632..2752#2853..3107#3195..3988#4095..4349#ATGGCACAGCAGCAAGCCGGTGCAAGAGGCAGCAAGCTGGAGATCGTCGCCGCCCGGGGAGGAAGTGGCGGCAGCAGCAGCGCCGGCGATGCGGAGGCGCCGCCGTTGGACGTCCTGAGGCAGGACTCCCTCTACCGCGACGCGACACGGCCGGCCCACGGCCACCATGGACAGGTGCTTGCTCATACTAAGCTATTATAAGTTATATGCATGCATGGCCATGGCCGAAAATTCAGCAAAAACATTTGTGGCACTAGCTTTCCTCTTGCCATCCATGAACATGGCGAACGAATCTGCCGCAAGCAGAAACTTAGGGGGAATGTGACCCCTCTTATAACAACGAATCTGAACAATATTATCTAGTAGTACACATAGTGTTGGCTAGGTAGGCTGAATGAGTGGTTGATATATGCAGGAGAGCTGGATGAGGACGCTGCGGCTGGGGTTCCAGTGCGTGGGAATCCTGCACGCCGACCTCGGCACGTCGCCGCTCTACGTGTACCAGAACACATTCAAGTACGGCATCAAGCACGAGGACGACATCATCGGCGTCCTCTCCCTCATCATCTACAGCTTCGTGCTATTCACCATGGTCAAGATCGTCTTCATCGCCCTCCACGCCAACGACGATGGCGACGGTGCGTGCAGTGTGCCCGACGACGCTTCCCAATACAAGTCTTCTTTGATCGATCATCACTAGTTGTTTGTTTGTTCTTACTATCGATTATAATTAATGGTTTTTTCAGGTGGGACATTTGCTCTGTACTCGTTGATCTCGCGGTACGCCAAGGTGTGCCTGATCCCAAACCAGCAAGCCGAGGATGAGCTGGTGACGAGGTACAACGACCACGGGAAGCCGCCGGCGACGCTGCGGAGGGCGCAGTGGATGAAGAGCCAGCTCGAGAAGAAGCCCGCCAAGATTGCCGTCTTCTTCCTCACCATCTTCGCCACCGCGCTGGCCATCAGCGACTGTGTGCTAAACCCTTCAGTCTCTGGTACACTATATAGCTAGATTAATGCACAATTATTGATTTACGCATAGTAATTCTTGATATAGTTAGTGTTCGATCGACCTGACATGATTTTGATCTTTTTGTTGTTTTGCTTCAGTACTGTCGGCGGTCAACGGCTTGAAACTTAGAGCACCTCATCTGACAACAGGTACAGTGAGAAAACAGAAAGCAGTAGTAGTATTACCCCCCGGAATTCAGTTTAAAAAATGGCGAGTCTTTAAACGAACAGTGAACCAAATAACGTGAAAAGCAAATTGTCCGTTAATCAAATACTACATGGCTACAGTGGTGCATGGACCAAAAGTCTAATCCATATTATACATTATTTTCGGTTTCACACGTTGCATGTGACAAAATTGCATGCAAACGCGATCAAGTCTAACATAATTAATGCATAAGGACTAGATCACTCCTTGAACTGCACAACTAATGTTTCCTGATCATCTTGTCAAGACTATTAACTGTCCACAATATTATAGGAGATCTCGATTAAAAAACTGATGCTACGGTTGATTAATTAATTTACTAGGTTGTGACCCAAATTGCAACGTGAACACTATGGTATCATGACAGAACTTGTAATGATCAACGCGCATATAGATTTACTAGTTAATTGCTGATGAACTATTTTCATCTGAACAGACGAAGTGGTCTGGATCACGGTGGGAATACTGGTGGTGTTTTTCGCAGTGCAACGGTTTGGCACTGACAAGATTGGCTACACATTTGCGCCGGTTGTTGTTGTGTGGCTGTTACTCATCTCAGGGATTGGCATCTATGACTTGGTCAAGTACGATGTCGGTGTCTTGAGGGCGTTCAACCCCAAATATATCATCGATTATTTCCGACGAAATAAGAAGGACGGATGGGTCCAGCTCGGTGAAGTTCTTCTTACATTTACCGGTGAGCTTAATTAATTACATGTTGTACTGAGTCTTGTGTGACAGAAATGAACGAACAAACATTAATGTCATTAGGCAGATGATATTGCATTCACTCTGTTCATTTTGTTAAGCATGATGCAGTGACAGGACAGACATGTGCATCTGCATAATTGTGGATAGTTGTAAATAAGTTTACTTAATTGAAGCAATTTTGTCTTTTGAATAACAGGCACAGAAGCTCTCTTTGCTGATTTAGGATACTTCAGCATCAAATCAATTCAGGTAGACTGTTATTACTTAACATCCCTTTGAATTATTCAAGCTGAGGTCTGAAGATATTTACTTTTTCCTAGGGTAATGATAGAAGTGTCTCCATATATAATTTGAAAGTGATGCAAATATAATTCATTGATATTAATTATTTGAAGGCCCAGTTAATTTCTTCCCTGTTATGTTGACTGGTCTGGAGTGAATAGGGTTGAAAGATGAAATACAGCCAGTGGCTGTGTTGTGTTGGTAAAGCACACGTTAACATAGTACACCACCATTAATTATGTGCCATTGCTTTGACGTGATGGTCTCACCAAACAAAGGATAACTTACTAATGCAACTTTTCAAGTGCTGGTGTTTTGCCAATATTTATCCGATATAGGAGTACATATATATAGGTAGTTGTACATATATCATATATAATTAAACATTTTGAAACTGATCAATCTTTTCTATGTTTCAGTTAAGCTCTACCTTTGTCTTGCTCCCATCAGTGTTATGCACCTACATTGGGCAAGCAGCATACCTAAGGAAACACATGGATCAGCAGCACATACAAAACGCTTTCTTCAATTCCATTCCAAGTATGTAAACCAAAACATACATCACCTATCATAAGCTTCGAAATTCATCGTCATCACGTACTGACAGAATATACATGGCTCTTCCGATTGTAATTTACAGGACCTCTGTTCTGGCCAATGTTCGTTCTCGCTATCATGACGTCAGTCATCGGTTGCCAAGCCATGGTGTCTTGTGCCTTTGCAACCATGTCACACTTGCAGACACTGAATTGTTTCCCACGGATTAAGATACTGCACACATCAAGGCGTTATTCAGGACAGTTGTACAGTCCTGAAGTGAACTTCTTCCTCTGCCTACTTTCCTGTGTAATCACCTTAAGTTTCAGGACGACAGGTTTCATTGTCAAAGCACATGGTAAGGACACTTCTAAATGTGCAACCTTATTTATTTTTTAATTTCAAATACTGATGATACTGACTATTCTTCTTCATTGTCAAACAGAAATTTGTGTGGTCCTTGTGATGGTTATCACAACTATCCTGATGACTATAGTCATGCTTCTCGTATGGAAAGTAAATATTTGGTGGATCGTTCTATTCTTTGTCGTCTTCATGTCAACGGAGACCGTCTACCTATCAGCAGTTCTCTACAAGTTCACAAAAGGACCATACATGCCCTTGGCTATGTCAGCTGTTCTAATGGTGATCATGTTCGTGTGGCACTACGTGCATGTGAAGCGATACAAGTTTGAGCTTGAACATACCGTATCACCTAATAAGGTTAGAGAGCTCCTTGAACGGCGTGATCTAAAGAGGGTTCCTGGTGTGGGGCTCTTCTACACTGAATTGGTGCAAGGCATCCCACCGATATTCCCTCACCTTATCGAGAAAATCCCGACCATTCACTCGGTAATCGTGTTCATCTCTATGAAGCACTTGCCTATCCCTCATGTCGATGTCTCGGAGCGCTTCCTCTTCCGGCAAGTGGAGCCCAAGGAGTGCATGGTGTTTCGATGTGTCGCACGATATGGATATCGGGATACTCTAGAGATGGCTGATGACTTTGTCACCACTCTTGTCGAGTACCTCCAGTACTATATCCGGGACCTAAATCTATACAACACGGTTGAGCCACTCAAGATGAGCTGCCCAAGCATTAGAATTGATAGTTTTTCCTGGGATAGACGACCCTCAGGGCATGGCATTTATGCCGAGGAGATGCTTACACCAATCCAATCATTTTCTGAGCTCACAATGCATCCTGTTGGTATGAGCAGCCGATTAGCGCAATTCCAAGTAAGAAATCAATATACTAATTAATTACCATATAGCTGAACAACATGTTGAAAATTATGTATTGTTCTTATATCTGGATGCTAATAATTTCCTTTTTGTAAATCAGACAACTAAGATGAGCCTTGAAGAGATGTTGAAGATTGAGGAAGACCAAAAGTTGATCCAACGAGAAGTGGACAATGGTGTGGTTTACATACTTGGGGAGAGTGAAGTGGTAGCGAAACCACATTCCAACCTGCTTAAGAAAGTTGTTGTAAACTACATATTCAACTTTCTGAGGAAAAACTCTCGAAAAGGAGAGAAGATGTTGTCTATTCCACGCCGCAAGTTGCTCAAGGTTGGAATCACGTATGAAATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010386