BGIOSGA010392

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Revision as of 09:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010392| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010392, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA010392

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010392, complete gene.

LocusTag

OSJNBA0029P07.5

Ensembl Transcript ID

BGIOSGA010392-TA

Ensembl Protein ID

BGIOSGA010392-PA

Length

3801

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23620632..23624432

Sequence Coding Region

23620632..23624432

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23620632..23624432 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23620632..23624432 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCATCGACGTTCGGATGGTCGGCGTCGGCGTTCGTCGCGGCCGTGCTCGCCCGCCTCATCGGCAAGGGCCTCGCGCTGCTCGCGGAGCTCGACGACGCCGCGGCAGGCCACCTCCGGCGCCTCGAGGCCCTCCTCGCCCCCGTCTGGCGTGTCCTCGACGCCGCCGACGCCGGCGCCATCGACGTTGTCGGCCACCGGCGCCCTCTTCAGGACCTTCTCGACGCCGCGTACGCCGCTGACGACGCCCTCGACGACCTCGTGCTGCTCCAGTCCGACGCGATGGCGAGAGGCGGGGAGCACGGTGTCGACGCCCGCGGGACGCCCGCCGCCGGCGCGGCGAGGAAGCCCAAGCCGCGCAGCCCGCTCAGGTTCCTGCTCTGCTTCAGCCCACCCAGAAATGCCGTTGCTAGCAGCAGCAGCAGCAGCAGCGGCAGCCATGGCAAAAGCTCAAAGGGGAACAAGAGTAATCCTGACCTGCGTGGCTTAGGAGTTGCGTTTGAGATGATGGCACAAGCTGCGTACAGGTGCACGTCGGCGTACGAGCACGTCGTGGCAGGGAAGAACTACGCCACGATGGTTTCAGCACAAGCAGAGGCTGCAACAGCAGCGGAAGCAGCTGATTATGATCAGTTTCAGAATGACATATTTGGGAGGGAAACTGAGGTGGAGCAGATCTTGGAGAAGGTGAGGTTCAGCGACGACCCGCATTACCGGCTAGGGATCGGTGTTCTCCCAATCGTCGGCGTCGAGGGGGTGGGCAAGACGGCGCTCGCGCAGTTCATCTTCCACCACGAGGTCGTCAAGGCCGAGTTCCCCGTGCGGATGTGGGTGCACGTCTCCGGCGAGGTCCAGCTCAAGGACGAACTCGTGGTCCAGATGATCCATGGTGTTGCCGGAGATGCCCATGAAGTCGAAGACATCAGGGAGATCCTTCACGAGGAGTTGACCGGCAAGAGGTTCCTGCTTGTTCTTGACGATGTTAGCGATGTCGGCGACATCCAGTGGAAAGATCTAATGAGGCTTCTGCAACCTGCAGCCAGGAGGAGCATGATCATGGTGACAACTCAATCTGAAATTGCAGCAAATGCGATAGGAACAATGCCTCCATTAATACTGAATCCATTGGAATCTGAGGATTACCAGAAGATGTTCAGACACTTCGCATTTGGCAGCTCTGATGAGTCTGAAGATTACACTCCACTGGGAGACGAATGGGACGACGTTGAAGACGAAGACGAGGAAGAGAAGCAGTCACCGATGGAGAAGGTTGCATTGGAGCTAGCCAAGAAGATGGGCGGCCCACCATTACCAGCGACGGCGATTGCACGGGCTCTGTTTTTCCGCCGGGAAGACAAGGAGCACTGGAAAAACGTGCTGGAAGACAAGCTCTGGGAGCAGCGAGACGTCGCCGGCATCTCGCCGGCGTTGTGGCTGAGCTACCAACACCTCGATCCTCGCCTCAAGCAATGCTTCGCATATTCTGCAGTGTTTCCATGTAGCCATGCCTTCACAAAGGATGAACTGGTTCAGATGTGGGTAGCACAGGGGCTGATATATTCTGAAGATGCCGTGGCGAGGCCTGAGGACATTGGAAGCAAGTTCTTTGAAGATTTGGTTGAAAGACGCTTCTTTCAGCCAATTGGAAGCAGCAGATATGTGGTACACAATTCGATGCGAAAACTAGCACAGGCAGTCTCAACAGATCAGTTCTTCATGGTCACCGAGAGCTCAGGAGACGTGCCACTAGAAGTTCGTCACCTGACCATCATGACAAACAACCTCTCCAAGCTGATAAATGATCTGTCATTGAAGATATCTCATTCATCTGGATCTGACCAACACTTCCTCCAACGGGTTCGTACAATTATTTTCTTTGCAGATTTCAGTAATTCAGATGAATTTATCGAATTTCTCGCTGAGATTTTCAAGGTAGCAAAAGATGTGAGAGTTCTTGGTGTGACATATGCAAATATAGCATTTTTACCTGCTGAGATTGGCTTTCTCCGACACCTCCGGTATCTGAATCTGCTCGGGAACAGAATAGCAGATCTTCCTGAGTCAGTTTGTGATCTCCACCTCCTCCAGGTTCTGGATGTGCGCTGCAGTTCTCCTTATCTCCGTGCTCCCAATGGCATCACCAATCTGATTTATCTGAGGCATTTGCATGCAAGTGAGCCTTTTCTTTCTATCATACCAAAAATACAGAATGTCTCACATTTGCAAGAATTGGAGGTGTACAAAGTTAGCAGTATTTCGCGCATCGACGCCTTACAAGGGATGACACAACTCCGAGGTACACTTTGTCTTAAAGATCTCCATCAGGTTGATGTTAGTGAGCTAAGGAAGGGCATCTTGAAGGGTATGCAACATCTGAACATATTAGAGTTGTCATGGAGCAGCTCTGATAGCCAAAGCAGAGAGGCTTCCACAGATGAAGACACACTTGAGTGCTTGCAACCACATGAGAACCTGAAAGATCTGAGAATTACAGGCTACAGAAGCACTAAATGCCCATCATGGATGCTAAAGACTCCTTGTTCTCTATCAAATGCTACTTCAGTTTTCTTAACGGATTGCGTGAACCTGAAGAATCTCCCTCCATTCCATATCATGCCCTGCCTTGAGATTCTCGAGATGAGAAAAATCCATTCTGTCAACAAGGTGAACACTGTTCCTCAACGATCAGATCAGATCATGTTCCCAAAGCTCAAACGCCTTGTTTTCGAAGATGTGTTGAACTGTACTGAATGGTCGACAGGCAGCTCAAAATCAAGAAACACCGTATTTCCCTGCCTCTGTGAAATTCAGATAAGGAACTGCCCAAAGCTGAGAAACTTTCCTGACCTTCCACTTACACTGACAACAATGATCATTGAGAATGTTGGTCTTGAAACACTACCAAGGATACAGGACAGACATTCATTACCACCATCATCATCATCAGATGCGATTGCAACATCGAAAGAAGGCAGATGGACATCAAGGCTCACAACACTACAAATACATCAGTGTCACGGGCTGAAATCTCTAGGATCAAGCCTGCTTCAGCAGCAGCACCTCCTAAGGTCCCTCGAGGTCTTGTCAATAAAGAACTGCGACAACGTTACGTGTGATCTCTCTGACGGTTTTCAGGACCTCACTGCATTGACAGACCTATCACTATACGATTGCCCGAAGCTTCTAGTCGACAAGTTCCACACATCGCTGCGAAAGCTAGAGATCAGCGAATGCTTCATCACACATGGGGCATGGGTGGATGACTACCCCTTCCTGTTCTCAGTGTGGACACTAAAGGTTACCAGTTGTCCTCATGTTAGCACTGATCAGGAAAGCAGCTTCAGCATCGAACCTCTGGATTGGTTGAACTGCCTGTTCAATGTGTGCAGCCTTCACCTGGAGAACACATTGCTTCTGAAACTGAGCATGTTTAACAGGCTTCGCTCTCTTGAGATCCTAGAGATCGACGGGAGTCGCTCATTCTTCGATGATTTGGTAGAGGAATTTGAGTGGCTGGAGAAGCTGCAGGATCTGAGCATTAGAAACTGCAAGGAATTGAGAATGCTTCCAGCGAATATCTCTACTCTGCCTGTGTTGGAAGAACTCTGCATAGAAAACTGTCCAGCTTTGGAGGCGTTGCCTGCGAGTGGTCTGCCTACTTCGCTGAAGAGATTGTCAATATCGAAATGCAGTCCACGGTTAACTCAACGATGTCTTGATGATGAACCTGATAATCTGAATATTGCAAAGATTGCTGTTGTTTACATTGATGGGCAATGTATTAGTATTCAACAAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MPSTFGWSASAFVAAVLARLIGKGLALLAELDDAAAGHLRRLEALLAPVWRVLDAADAGAIDVVGHRRPLQDLLDAAYAADDALDDLVLLQSDAMARGGEHGVDARGTPAAGAARKPKPRSPLRFLLCFSPPRNAVASSSSSSSGSHGKSSKGNKSNPDLRGLGVAFEMMAQAAYRCTSAYEHVVAGKNYATMVSAQAEAATAAEAADYDQFQNDIFGRETEVEQILEKVRFSDDPHYRLGIGVLPIVGVEGVGKTALAQFIFHHEVVKAEFPVRMWVHVSGEVQLKDELVVQMIHGVAGDAHEVEDIREILHEELTGKRFLLVLDDVSDVGDIQWKDLMRLLQPAARRSMIMVTTQSEIAANAIGTMPPLILNPLESEDYQKMFRHFAFGSSDESEDYTPLGDEWDDVEDEDEEEKQSPMEKVALELAKKMGGPPLPATAIARALFFRREDKEHWKNVLEDKLWEQRDVAGISPALWLSYQHLDPRLKQCFAYSAVFPCSHAFTKDELVQMWVAQGLIYSEDAVARPEDIGSKFFEDLVERRFFQPIGSSRYVVHNSMRKLAQAVSTDQFFMVTESSGDVPLEVRHLTIMTNNLSKLINDLSLKISHSSGSDQHFLQRVRTIIFFADFSNSDEFIEFLAEIFKVAKDVRVLGVTYANIAFLPAEIGFLRHLRYLNLLGNRIADLPESVCDLHLLQVLDVRCSSPYLRAPNGITNLIYLRHLHASEPFLSIIPKIQNVSHLQELEVYKVSSISRIDALQGMTQLRGTLCLKDLHQVDVSELRKGILKGMQHLNILELSWSSSDSQSREASTDEDTLECLQPHENLKDLRITGYRSTKCPSWMLKTPCSLSNATSVFLTDCVNLKNLPPFHIMPCLEILEMRKIHSVNKVNTVPQRSDQIMFPKLKRLVFEDVLNCTEWSTGSSKSRNTVFPCLCEIQIRNCPKLRNFPDLPLTLTTMIIENVGLETLPRIQDRHSLPPSSSSDAIATSKEGRWTSRLTTLQIHQCHGLKSLGSSLLQQQHLLRSLEVLSIKNCDNVTCDLSDGFQDLTALTDLSLYDCPKLLVDKFHTSLRKLEISECFITHGAWVDDYPFLFSVWTLKVTSCPHVSTDQESSFSIEPLDWLNCLFNVCSLHLENTLLLKLSMFNRLRSLEILEIDGSRSFFDDLVEEFEWLEKLQDLSIRNCKELRMLPANISTLPVLEELCIENCPALEALPASGLPTSLKRLSISKCSPRLTQRCLDDEPDNLNIAKIAVVYIDGQCISIQQK</aaseq>

Gene Sequence

<dnaseqindica>1..3801#ATGCCATCGACGTTCGGATGGTCGGCGTCGGCGTTCGTCGCGGCCGTGCTCGCCCGCCTCATCGGCAAGGGCCTCGCGCTGCTCGCGGAGCTCGACGACGCCGCGGCAGGCCACCTCCGGCGCCTCGAGGCCCTCCTCGCCCCCGTCTGGCGTGTCCTCGACGCCGCCGACGCCGGCGCCATCGACGTTGTCGGCCACCGGCGCCCTCTTCAGGACCTTCTCGACGCCGCGTACGCCGCTGACGACGCCCTCGACGACCTCGTGCTGCTCCAGTCCGACGCGATGGCGAGAGGCGGGGAGCACGGTGTCGACGCCCGCGGGACGCCCGCCGCCGGCGCGGCGAGGAAGCCCAAGCCGCGCAGCCCGCTCAGGTTCCTGCTCTGCTTCAGCCCACCCAGAAATGCCGTTGCTAGCAGCAGCAGCAGCAGCAGCGGCAGCCATGGCAAAAGCTCAAAGGGGAACAAGAGTAATCCTGACCTGCGTGGCTTAGGAGTTGCGTTTGAGATGATGGCACAAGCTGCGTACAGGTGCACGTCGGCGTACGAGCACGTCGTGGCAGGGAAGAACTACGCCACGATGGTTTCAGCACAAGCAGAGGCTGCAACAGCAGCGGAAGCAGCTGATTATGATCAGTTTCAGAATGACATATTTGGGAGGGAAACTGAGGTGGAGCAGATCTTGGAGAAGGTGAGGTTCAGCGACGACCCGCATTACCGGCTAGGGATCGGTGTTCTCCCAATCGTCGGCGTCGAGGGGGTGGGCAAGACGGCGCTCGCGCAGTTCATCTTCCACCACGAGGTCGTCAAGGCCGAGTTCCCCGTGCGGATGTGGGTGCACGTCTCCGGCGAGGTCCAGCTCAAGGACGAACTCGTGGTCCAGATGATCCATGGTGTTGCCGGAGATGCCCATGAAGTCGAAGACATCAGGGAGATCCTTCACGAGGAGTTGACCGGCAAGAGGTTCCTGCTTGTTCTTGACGATGTTAGCGATGTCGGCGACATCCAGTGGAAAGATCTAATGAGGCTTCTGCAACCTGCAGCCAGGAGGAGCATGATCATGGTGACAACTCAATCTGAAATTGCAGCAAATGCGATAGGAACAATGCCTCCATTAATACTGAATCCATTGGAATCTGAGGATTACCAGAAGATGTTCAGACACTTCGCATTTGGCAGCTCTGATGAGTCTGAAGATTACACTCCACTGGGAGACGAATGGGACGACGTTGAAGACGAAGACGAGGAAGAGAAGCAGTCACCGATGGAGAAGGTTGCATTGGAGCTAGCCAAGAAGATGGGCGGCCCACCATTACCAGCGACGGCGATTGCACGGGCTCTGTTTTTCCGCCGGGAAGACAAGGAGCACTGGAAAAACGTGCTGGAAGACAAGCTCTGGGAGCAGCGAGACGTCGCCGGCATCTCGCCGGCGTTGTGGCTGAGCTACCAACACCTCGATCCTCGCCTCAAGCAATGCTTCGCATATTCTGCAGTGTTTCCATGTAGCCATGCCTTCACAAAGGATGAACTGGTTCAGATGTGGGTAGCACAGGGGCTGATATATTCTGAAGATGCCGTGGCGAGGCCTGAGGACATTGGAAGCAAGTTCTTTGAAGATTTGGTTGAAAGACGCTTCTTTCAGCCAATTGGAAGCAGCAGATATGTGGTACACAATTCGATGCGAAAACTAGCACAGGCAGTCTCAACAGATCAGTTCTTCATGGTCACCGAGAGCTCAGGAGACGTGCCACTAGAAGTTCGTCACCTGACCATCATGACAAACAACCTCTCCAAGCTGATAAATGATCTGTCATTGAAGATATCTCATTCATCTGGATCTGACCAACACTTCCTCCAACGGGTTCGTACAATTATTTTCTTTGCAGATTTCAGTAATTCAGATGAATTTATCGAATTTCTCGCTGAGATTTTCAAGGTAGCAAAAGATGTGAGAGTTCTTGGTGTGACATATGCAAATATAGCATTTTTACCTGCTGAGATTGGCTTTCTCCGACACCTCCGGTATCTGAATCTGCTCGGGAACAGAATAGCAGATCTTCCTGAGTCAGTTTGTGATCTCCACCTCCTCCAGGTTCTGGATGTGCGCTGCAGTTCTCCTTATCTCCGTGCTCCCAATGGCATCACCAATCTGATTTATCTGAGGCATTTGCATGCAAGTGAGCCTTTTCTTTCTATCATACCAAAAATACAGAATGTCTCACATTTGCAAGAATTGGAGGTGTACAAAGTTAGCAGTATTTCGCGCATCGACGCCTTACAAGGGATGACACAACTCCGAGGTACACTTTGTCTTAAAGATCTCCATCAGGTTGATGTTAGTGAGCTAAGGAAGGGCATCTTGAAGGGTATGCAACATCTGAACATATTAGAGTTGTCATGGAGCAGCTCTGATAGCCAAAGCAGAGAGGCTTCCACAGATGAAGACACACTTGAGTGCTTGCAACCACATGAGAACCTGAAAGATCTGAGAATTACAGGCTACAGAAGCACTAAATGCCCATCATGGATGCTAAAGACTCCTTGTTCTCTATCAAATGCTACTTCAGTTTTCTTAACGGATTGCGTGAACCTGAAGAATCTCCCTCCATTCCATATCATGCCCTGCCTTGAGATTCTCGAGATGAGAAAAATCCATTCTGTCAACAAGGTGAACACTGTTCCTCAACGATCAGATCAGATCATGTTCCCAAAGCTCAAACGCCTTGTTTTCGAAGATGTGTTGAACTGTACTGAATGGTCGACAGGCAGCTCAAAATCAAGAAACACCGTATTTCCCTGCCTCTGTGAAATTCAGATAAGGAACTGCCCAAAGCTGAGAAACTTTCCTGACCTTCCACTTACACTGACAACAATGATCATTGAGAATGTTGGTCTTGAAACACTACCAAGGATACAGGACAGACATTCATTACCACCATCATCATCATCAGATGCGATTGCAACATCGAAAGAAGGCAGATGGACATCAAGGCTCACAACACTACAAATACATCAGTGTCACGGGCTGAAATCTCTAGGATCAAGCCTGCTTCAGCAGCAGCACCTCCTAAGGTCCCTCGAGGTCTTGTCAATAAAGAACTGCGACAACGTTACGTGTGATCTCTCTGACGGTTTTCAGGACCTCACTGCATTGACAGACCTATCACTATACGATTGCCCGAAGCTTCTAGTCGACAAGTTCCACACATCGCTGCGAAAGCTAGAGATCAGCGAATGCTTCATCACACATGGGGCATGGGTGGATGACTACCCCTTCCTGTTCTCAGTGTGGACACTAAAGGTTACCAGTTGTCCTCATGTTAGCACTGATCAGGAAAGCAGCTTCAGCATCGAACCTCTGGATTGGTTGAACTGCCTGTTCAATGTGTGCAGCCTTCACCTGGAGAACACATTGCTTCTGAAACTGAGCATGTTTAACAGGCTTCGCTCTCTTGAGATCCTAGAGATCGACGGGAGTCGCTCATTCTTCGATGATTTGGTAGAGGAATTTGAGTGGCTGGAGAAGCTGCAGGATCTGAGCATTAGAAACTGCAAGGAATTGAGAATGCTTCCAGCGAATATCTCTACTCTGCCTGTGTTGGAAGAACTCTGCATAGAAAACTGTCCAGCTTTGGAGGCGTTGCCTGCGAGTGGTCTGCCTACTTCGCTGAAGAGATTGTCAATATCGAAATGCAGTCCACGGTTAACTCAACGATGTCTTGATGATGAACCTGATAATCTGAATATTGCAAAGATTGCTGTTGTTTACATTGATGGGCAATGTATTAGTATTCAACAAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010392