BGIOSGA010400

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Revision as of 09:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010400| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010400, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA010400

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010400, complete gene.

LocusTag

OSJNBA0095N06.1

Ensembl Transcript ID

BGIOSGA010400-TA

Ensembl Protein ID

BGIOSGA010400-PA

Length

5121

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23368123..23373243

Sequence Coding Region

23372866..23373243,23369167..23369798,23368983..23369039,23368123..23368180

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23368123..23373243 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23368123..23373243 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTACGGAGAGCGATCAGTACCCGGCGCACCTGTCGTCGTCGGCGACTGTCGCCGGGCATGGCGACGACGGCGGCAGCAGCACGAGGAGGAGGGAAGGGGCGGCGGCGGGTGGTGGTGGTGGGCATGCGGCGAGCGCCGAGCTGGAGCGCATCCTGGCGGACGAGTCGGTGCCGTCCGCGGCGCGGCTGGCGCGCGCGGCGCCCGTGGAGCTGCGGCTGCTGGTGGCGCTCGCGGCGCCGGCCGTGGCGGTGTACATGATCAACTACGCCATGTCGATGTCGACGCGGATCATCTGCGGCCAGCTCGGCACGCTGGAGCTCGCCGCCGCCTCGCTCGGCAACGTCGGCATCCAGGTCTTCGCCTACGGCCTCATGCTTGGCATGGGAAGCGCGGTGGAGACGCTGTGTGGGCAGGCGTACGGAGCGCACAAGTACGACATGCTCGGCGTGTACATGCAGCGTTCCACCGTGCTGCTCACCGCCACCGCCGTCCCGCTCGCCGTCATCTACGTCTTCTCCAAGGAGATACTCATCCTCCTCGGCGAGTCCCCGGAGATCGCCGGTGCCGCCCGCCTCTACGTCGTCGGCCTCATCCCGCAGATCTTCGCCTACGCCGCCAACTTCCCGATCCAGAAGTTCCTGCAGGCGCAGAGCATCGTGGCGCCGAGCGCCTACATCTCCGCGGCCACGCTCGCCGCGCACGTCGCCCTGAGCTGGTTCGCCGTCTACAAGCTTGGCCTCGGCCTGCTCGGCGCCTCGCTGATCCTCAGCCTCAGCTGGTGGGTCATCGTGCTGGCGCAGTTCGCGTACATCGTCGTCTCCGACAGGTGCAGGCTGACGTGGGCCGGATTCTCGTCCAAGGCGTTCTCCGGCTTGCCGGAGTTCCTCCAGCTGTCGGCCGCGTCGGCGGTGATGCTTTGCCTCGAGACGTGGTACTTCCAGGTCACGGTCCTCATCGCCGGCTTGCTCAAGGATCCGGAGATCGCCCTCGACTCTCTTGCAGTGTGCATGTCAATATCAGGATGGGTGTTCATGGTGTCGGTTGGCTTCAATGCAGCAGCTAGCGTTAGAGTGAGCAATGAGCTTGGTGCGGGCAACCCGAGGGCAGCAGCGTATCCGTGA</cdnaseq>

Protein Sequence

<aaseq>MGTESDQYPAHLSSSATVAGHGDDGGSSTRRREGAAAGGGGGHAASAELERILADESVPSAARLARAAPVELRLLVALAAPAVAVYMINYAMSMSTRIICGQLGTLELAAASLGNVGIQVFAYGLMLGMGSAVETLCGQAYGAHKYDMLGVYMQRSTVLLTATAVPLAVIYVFSKEILILLGESPEIAGAARLYVVGLIPQIFAYAANFPIQKFLQAQSIVAPSAYISAATLAAHVALSWFAVYKLGLGLLGASLILSLSWWVIVLAQFAYIVVSDRCRLTWAGFSSKAFSGLPEFLQLSAASAVMLCLETWYFQVTVLIAGLLKDPEIALDSLAVCMSISGWVFMVSVGFNAAASVRVSNELGAGNPRAAAYP</aaseq>

Gene Sequence

<dnaseqindica>1..378#3446..4077#4205..4261#5064..5121#ATGGGTACGGAGAGCGATCAGTACCCGGCGCACCTGTCGTCGTCGGCGACTGTCGCCGGGCATGGCGACGACGGCGGCAGCAGCACGAGGAGGAGGGAAGGGGCGGCGGCGGGTGGTGGTGGTGGGCATGCGGCGAGCGCCGAGCTGGAGCGCATCCTGGCGGACGAGTCGGTGCCGTCCGCGGCGCGGCTGGCGCGCGCGGCGCCCGTGGAGCTGCGGCTGCTGGTGGCGCTCGCGGCGCCGGCCGTGGCGGTGTACATGATCAACTACGCCATGTCGATGTCGACGCGGATCATCTGCGGCCAGCTCGGCACGCTGGAGCTCGCCGCCGCCTCGCTCGGCAACGTCGGCATCCAGGTCTTCGCCTACGGCCTCATGGTACGCCATGCTAACTACTATACGTAGTAGTACATATATATTTTCAGTAGTTGCATGATCCTCCTATCATGGAAGAATAACGTAATATTGGTCGATTGGGGTCAGATTTTATCAGATTGAATATCAAATCAAATCAAATAAGAATAAAGAGTAGGCCCGAACCTGAAAACCGGCCTTTATATTACAAAAATTGATTCTTTCAATTTGGATTTGTATTGGTGTTGCCTTACACAATTTTTTCTTGACTTTATTACCTTTTTATTTTTGCGATTGGCTTTCACAAAGTATAAAACGTATAACGTATAACTCATAGTATCAAATGTTTGGATATCTATTTACAAGGGGGTTGCATAGGTGCTTTGATAATTCGATTAGTATGCATAATAATATAACTCATATTTTTAACCACTAGAGCAAATCAACAAGCTCTCAATTAGACACACATCATGTGGCTGATTCGAGAAATGACTGATTAATATTCCCTCCGTTTCATACTATAAATCGCTTTGGTTCTTGAAAGTTTGACCAAACTTATAAAAAAAATATAACAATATTTATAGCACTAGATTAATTTTATTAAATATAACATTGAATATATTTTGATAACTTCTTTATTTTATGTTGAAAATATTGCTATATTTCTTTTATAAAACTAAATCAAAGTTAAAAAAGTTTGATTTAGAAAAAAGTTAAAAAAAACTTATGAAATAGAGATAGTATATTTGAATATCGACAAATTAAATTACTAGTTATTTCTTTCGGTGCGAATAAGATCAAGGAGTGTCAGAAGTAAAATTTTATTAAATTATCTTCACATCAAACTATTCCTTGTATTGTGTTGTTCGGTTCTTGTTCCTATTTTGCAAGGGGCCGAGAAGAGAGATTCCTATGGGTGCAACCGGAATAATGCTTTGCATTTAATTAACTTCTTTTAGCCGTCAGACCAAATTAATGCGAACGGATAATATCGATCGCTGTATTAGAGCAAGTTTAGGGCCGGTTCACTTTAATGTCATTTTCAATCATACCATTTTTTTAAAAGTTATAAAAAATGTCTACGTTTAATTTGTTACCAAAATTGGTAAATACATAAGAAATCATGCTTAAATTTTGGCAATATTACCATCTTGCCAAAATTTAGGCATTGACAAAATTTGGTAAGGTTTATTTTAGCTACTATCTGAACATGCCCTTAATAATATAACGAATTACTAGCTCCAAAAAATAGTAAATCATTTATAACTAACTTAATAGCCTACAAATACAATAGTTAACTATAAATCTGTAGACCGCTTTTCCTCTCTACCTCTTCTCTTTCCTCCATATAAGAGCAAGGCTAATAATATAGCCAGCTGCTTACTGTATAGATCTTTATAGCCTATCTCTTAGCCAACTCATATAGTGGTTAGCTCTTAACTATTAATATATGGTCCACCTGTCACTCTCACAGATTTTTTTGGTTCCTGTGCCAAAGCCGGCTATAAGCTTACCACCCGCTTTTCCTTTTTCTCCTCTCCTCTCTCATCCACCTCAGCATTAAGCCTTCTTATAGCCTTCCTCAGCATTAAGCCTTCTTATAGCCTTCTATTATACTTGCTCTAAGCACAAATATAACGTGGTAACATCAATAACATGCTTAATGATATCATCTTATAGTACTTGTTCTTAATATTCTATCTGTAAGTTAACAACGCGGTTAACACAACAGTATACCCAACAAATAATACTATCAATACAGTAAAGTGGATGCAGCTCTCTGCTTTACTATTAGGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACATGTCATACACACACAACTTTTCAGTCACATCATCTTCAATTTCAACCAGAATCTAAACTTTGCGCTGAACTAAACATAGTCTACACATTATTGTCATGAGAAGGGAATATATATACCTCCCTTGAAGGGACAGGTTGGAAAGAAAAAAAAATTCCTTTACACTAGACCCAATCATTTAATTTTTTTTTCTAGACACTACAAATATAATATATCTCAGAATATGAGAAAAACATAGGGGAACTTCTACAAGTAAGAAACAATAAAATCAAGAAATTACCATTAAAATTTGCCTAAACTGAATATAATAGATGGCAATGAAACTCAGCTATAAGGTTTTGCCAGTTATAAGGTGACAACAGAAGAAAAGGAAAACAGTTAAAAAAATCCGCAAAGCCATCCTAGTATTAATAAGTTCATTTTAAGTTTTTCTTTTCTTAAATACCCTTACCAACCCTCACCTACTCACTCAATAATATTATTTTCCTATTAATAATGGGCACATTGGTTTTTCGCTCCATCTTGTTTTCAACATCTAAGGTACAAGGTCAAAGATTAAGTTAATTTAAGACATTTGTAACATAAAACAAAAGAAGTCATATGGTACACAGTATTATCACTTGAAACTTGATGGAGAAACATGTCATGCGTGAGGATCAAGGGCACTCAAATATGGAGCGAGAGAATCAGACAACAAGAAGCGTACATATTGTCATATTGATATGACCAGCTACAGAGAGCGCCACTTTTCTCGTTTTCAGATGCCTGCGCAGAATTCTGTTTCTTGCTACAGCTAGCCATATATACTTTACCTGTTTTCAGATGCCTACGCAGAATTCTGTTTCTTGCTAACTATTTAGATCGTGCATACACGTGAAATAAAACGCCACTCAAAAGTCAAGTGCTCTCTGTTGCTAATTAAGTGGTGCTAACTGCTAAGCACCATGCATGCACACACATAAGCTTCTCCATGTTCTAACTTTATGCAACAAAGTTTCAAAAAGAAAAACTTTACATAAAAAGCGATTTTAGAGTCCTTAAGAAGTCTACGGTGACAAAGCCTAGATACCAATTGCCGTCAAAAGAAAAAAAAAAGCCTAGATACCAACATTTGTGTTATAATACATGGTATCGATCTCTTTGAGTTTTAAGAGCTGGAGTTGATAAATATTTTACTAGTAATTCAATTATTTTAATATAAGTTTTAAAAACAAATTATCCAATAAACAATGCGCTGCAGCTTGGCATGGGAAGCGCGGTGGAGACGCTGTGTGGGCAGGCGTACGGAGCGCACAAGTACGACATGCTCGGCGTGTACATGCAGCGTTCCACCGTGCTGCTCACCGCCACCGCCGTCCCGCTCGCCGTCATCTACGTCTTCTCCAAGGAGATACTCATCCTCCTCGGCGAGTCCCCGGAGATCGCCGGTGCCGCCCGCCTCTACGTCGTCGGCCTCATCCCGCAGATCTTCGCCTACGCCGCCAACTTCCCGATCCAGAAGTTCCTGCAGGCGCAGAGCATCGTGGCGCCGAGCGCCTACATCTCCGCGGCCACGCTCGCCGCGCACGTCGCCCTGAGCTGGTTCGCCGTCTACAAGCTTGGCCTCGGCCTGCTCGGCGCCTCGCTGATCCTCAGCCTCAGCTGGTGGGTCATCGTGCTGGCGCAGTTCGCGTACATCGTCGTCTCCGACAGGTGCAGGCTGACGTGGGCCGGATTCTCGTCCAAGGCGTTCTCCGGCTTGCCGGAGTTCCTCCAGCTGTCGGCCGCGTCGGCGGTGATGCTTTGCCTCGAGACGTGGTACTTCCAGGTCACGGTCCTCATCGCCGGCTTGCTCAAGGATCCGGAGATCGCCCTCGACTCTCTTGCAGTGTGGTTAGTAAAGTACAGTATCACATTCAGTTAATCATCCAATAATGCAACCTGATGAGGATGAAGTGTGGTGCGTGATCGATGCTTGATCTTAATGCCACTGATAATGATCTTCAAATTATTCTTCCAGCATGTCAATATCAGGATGGGTGTTCATGGTGTCGGTTGGCTTCAATGCAGCAGCTAGGTAATTGTGTAATTCTCTCTTCTAAGGACCAGGCATTGACACTTAACCAACAACGTGTGTACAGTAGTGGACACATGCATCGTTTCAATCATAAATAGTGAAATCAATTACATTCCATCGAGTAAGTGAGATCGAGATGCTTTTTTTTATGCATGTGAACATATATCCAACAAACTTCCTAATTAATGTCACGTCTTACTGCCATTTGGAGGTCTCATCAATCCCTATAGGGTCCCAAGTGGTTAGGTATCGATATGGATCTGCACGTACATTGCATTTTACCCAGGTGCATGCAGGGGTGGGTCAGGACGATATCCCAACAAAGCGAGATTTAGTACCATGTACTTATGGATCTGCAAATTGATATAAGCTTAAAGTGCATCATCTCACAATCTCAATTGTACTACTAAATGGAACTCATTTATATATATTATGGCCCTGTTTAGATCCATTTGAAATAGCAAATAACAAATAGCAAAAGTTTTGGTGGCAAAAGTTTTGGTATTGCAAAAGTACTGGTTGGTGTTTAGATGTATCCTAAACTTTTGTCATTCTAGCACTAAAGTGAGAGAGAGAGAAAGAGAGAGGGAGTGGTCCCAAAACACTTTTTGGCACAATTTGCTACTATGGACTAGCAAATGTCAAATGCCAAATTGCCAAGTTTTACTACTAGTATTTAGATCCAAAATGGCAAAAAGTGCTTTAAAATGGTAAATTGCTACTTTTGCCATTTCGAAGGATGTAAACAGGGTCTATGTACTTACTTCCTAAGTAATAATGTATACGGTGTTTAATTGTGCAGCGTTAGAGTGAGCAATGAGCTTGGTGCGGGCAACCCGAGGGCAGCAGCGTATCCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010400