BGIOSGA010402

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Revision as of 09:15, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010402| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010402, complete gene.| tag = OsI_123...")
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Gene Name

BGIOSGA010402

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010402, complete gene.

LocusTag

OsI_12315

Ensembl Transcript ID

BGIOSGA010402-TA

Ensembl Protein ID

BGIOSGA010402-PA

Length

8424

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23351236..23359659

Sequence Coding Region

23359518..23359659,23358950..23358978,23358543..23358585,23357979..23358413,23352874..23353127
,23352240..23352341,23351705..23352157,23351398..23351604,23351236..23351265

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23351236..23359659 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23351236..23359659 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGAGATGTGTGCGGGAGGGATCCAAGCGAGGTGCCTGGCTAGAGGCGCCACATCCGTCGGGGAAGACGAGGGTTCGCTGGGGAAGACGAGGGTTCAGTCAACGCATGAGAGAGCCACTACAATGGAAGGATGCGAGGATGGGGTGACGGCCGCAGCGGCAGCGACAGAATATTTTTTCTGGTCAGCCTACAGAGACAAGTTCTGGCAAGGAAGCATGTCAGTAGATAGGAGTTGGATGCGCATGAGTAGGGCAACTGCAGAGTGGCAAAAAGGGTTGCAGGAATTTTTAAATTTTGCATTTCAAGATGATAATCCTGGGGATAATGCCCCCTGTCCATGTAGAAGATGCCTTAATGTGGTACACAAAACACGCTCCGAAGTGCAAAGTGACTTGCTAAGGAATGGATTCGATGAAAGTTACATACAGTGGGTTTACCACGGTGAAGATTCAGATGATGACAATGTCACTGAAGGAGTTGGTGCTGATGACGTCACAAATGATGGTGCTGCAGTTCGTAATATGATCAATAGTCTATTAAGGGGCACTAATCCTGAAGCCACCTCAAGTACTCATGAAGACAATTATGCTGATAACAGTGGGACTTTCACTGAAGATGGGAATGTTACCGCCACTGAAGCAGAAGATATGGACCAATCACACAAGAAAGGGCGTGGTACACATAAAGGTTTTAAAGTGGCTAAAAAAAGATTCAGTAGTGGTTCTCAGAAACTCCAAATTGAATTCTCTACGAGATTGGGAGGTCCCATAGGAATAAACCACCGCTCTTTCGTAGAGGAAGTTGTTATGTATACAAAAAAGAAGGCACCACTAATTGGAGTTAGAACGTGGAAAGATATACATGAGACAGTGAAAAAATCTATAGTTATTGATGTGCTGAGAGATAAGGAAACAGGGGAAGAGCCAAGTATACTTGACTTATGGCAAGCTACTCATATGAGGAATGGTGAATGGTCGAACATTGCATCAAAGGATGTCTATGAAAATGCACACAATGAGATCAGTGAGAGAGAAGCAGATACAGGAAATGCAATAACAAATGAAGAGCAAAACATTGTTTTCCAAGCATGCTATAGGGACTCTACAGGTTGTAAAACATCTCAAGCTCGTGGACAAGGTTACATGGCTAAACCTCTAACCACTACAGCAATGTTGCATGCTAAATTGGATGAACAAGCTCATGTAACTTCTGAAACCCAGCAACAGAATGATAAGCTCTCTTCTGAGGTTGAGGAGTTGAAAGCAAAACTTGCAGCTCGAGAAGAAGAAAGTGATAAGGCACTTCAAGCAGAGCGCAATGAAAGGCTTCGATTTGAACAAGAAGAACGGAATGCAAGGCTTAAAATGCAAGAAGAAGAACGTAAGGAAAGGGAAATGCTACGGGAGGATATTCTCAAAATGATTACTACGCAAAGCGTAGCATCGGAACAACAGTCTGATCTGACAATAGATTGTCCAACTGAGAATAGAGAACCACATGACACAACAAAGAAGGCTCGAAGCATTCAGAACAACACAGTTGTGAAAGCACTTTTTAACAACGCTAATTTGCAAGGAACAACAAGTACTACCCGGCAAAATATTTCTTCACAACATCTTAGGAATGTTGCTAGAAATTTTGTACGGTCCCGAACTGATCAGGCCAGAGGAGAAAAATGGAAGAATGAATGA</cdnaseq>

Protein Sequence

<aaseq>MPEMCAGGIQARCLARGATSVGEDEGSLGKTRVQSTHERATTMEGCEDGVTAAAAATEYFFWSAYRDKFWQGSMSVDRSWMRMSRATAEWQKGLQEFLNFAFQDDNPGDNAPCPCRRCLNVVHKTRSEVQSDLLRNGFDESYIQWVYHGEDSDDDNVTEGVGADDVTNDGAAVRNMINSLLRGTNPEATSSTHEDNYADNSGTFTEDGNVTATEAEDMDQSHKKGRGTHKGFKVAKKRFSSGSQKLQIEFSTRLGGPIGINHRSFVEEVVMYTKKKAPLIGVRTWKDIHETVKKSIVIDVLRDKETGEEPSILDLWQATHMRNGEWSNIASKDVYENAHNEISEREADTGNAITNEEQNIVFQACYRDSTGCKTSQARGQGYMAKPLTTTAMLHAKLDEQAHVTSETQQQNDKLSSEVEELKAKLAAREEESDKALQAERNERLRFEQEERNARLKMQEEERKEREMLREDILKMITTQSVASEQQSDLTIDCPTENREPHDTTKKARSIQNNTVVKALFNNANLQGTTSTTRQNISSQHLRNVARNFVRSRTDQARGEKWKNE</aaseq>

Gene Sequence

<dnaseqindica>1..142#682..710#1075..1117#1247..1681#6533..6786#7319..7420#7503..7955#8056..8262#8395..8424#ATGCCGGAGATGTGTGCGGGAGGGATCCAAGCGAGGTGCCTGGCTAGAGGCGCCACATCCGTCGGGGAAGACGAGGGTTCGCTGGGGAAGACGAGGGTTCAGTCAACGCATGAGAGAGCCACTACAATGGAAGGATGCGAGGGTACACAGGGTCGGCTTCGGCCCCGGCGTCGACGAGGAAGCGGAGCCGGAGGATGTCGCTTGCTGCAGATGGGGGGTCGGCCGCGGCGCCATCGATGGAAGTTGAACGCAGCGCCGCCGCCGTCGATGGAAGCCGAGCGCAGCGCTGCCGTTGACGGAAGCCGGGTGTATCGTCGGATGCCGAATATGCCGCGTCGCGCCGCTGCCGCCGCCGCCGCTGGGCGTAGCACTGCCTCCACCGCCGGACGCCCTATGCCATCGCCACCACACTACCACGTAGGCCAGGGCACAAAGCTGCCATCCAATGGGTTGTGGAGGTAATTAAATTGAGTTATTGGAGAAGATAGAGAGAAATCAGACTGGAAGACATGATTTATTTTTTTTACTAGTGCTATTGATTTCCCAGGCATAAATTCATATTATTTTTTATACATATATAGACGTATCCCGTATCCATGTTTTTCAAAAAATGATGTATCCTATCCATATCCGTATCCCTGTATCTCGGTAACATAGAGCAAAGGATGTTGCTTGCTGCAGATGGGGTGACGGCCGCAGCGGCAGCGACAGTGAGTAGTTTAGAACTTCAGATTAGCTATCTTAGTAGGCAAGCAGAGCAGGCAGGGCGAGCATTGCTAGCGTAGAATAGCTCAGATGAGTTATGTTTGTTTCTGAATTTCTGTCTTTGTTTCTGAATTTCTGTCTCCCACAAGATTACCTTGGTTATACTGCACAATATCCAAATTTGCTATACACGGTCTCTCATATTTATTAATTTCTTCAGTTTGTCCAATTTCTCATATGAATTTTGAAAAATAAGAAACACCTTCCATGGGAATACCAATATATCTATTACTGTCCAATGTCTATTTTTCAGCTCAAATCCTCATGATTTTGTTTAGTTCTAATTTATCTGTTCATATCTTTGTACAGGAATATTTTTTCTGGTCAGCCTACAGAGACAAGTTCTGGCAAGGTGAGTTTATGTTCACACAGTTTCTCCATTTTCCTTAAGATCATAAAGTGCCAACCATATTTTCCTTGTTTTTTTTTTCATTAAATGGGTGGTTTGATACTATTAGTAATATTGTATAGTGATAAGCAGGAAGCATGTCAGTAGATAGGAGTTGGATGCGCATGAGTAGGGCAACTGCAGAGTGGCAAAAAGGGTTGCAGGAATTTTTAAATTTTGCATTTCAAGATGATAATCCTGGGGATAATGCCCCCTGTCCATGTAGAAGATGCCTTAATGTGGTACACAAAACACGCTCCGAAGTGCAAAGTGACTTGCTAAGGAATGGATTCGATGAAAGTTACATACAGTGGGTTTACCACGGTGAAGATTCAGATGATGACAATGTCACTGAAGGAGTTGGTGCTGATGACGTCACAAATGATGGTGCTGCAGTTCGTAATATGATCAATAGTCTATTAAGGGGCACTAATCCTGAAGCCACCTCAAGTACTCATGAAGACAATTATGCTGATAACAGTGGGACTTTCACTGAAGATGGGAATGTTACCGCCACTGAAGCAGAAGGTAGAAAGAATGAAGAACCAAATGAATGCGCTAAGGCATTCTTTAATTTACTAAAAGATGCTGAGAAGGAATTGTATCCAGGGTGCAAGGAGGTGACTAAGTTGTCTTTCATTGTTAGGCTTTTTCAGATTAAATGCATGTTTGGGATGAGTAACAAGGCATTGGAGGCCATACTTGAACTGTTCTCGCTTGTTCTACCAAAAGACCACTACATTCCGAATAGCCTAGAGAAAGTGCAAAAGGTTATTAGAGACCTTGGCCTAGACTACCAAAAGATACACGCATGCTTTAATGATTGCGTGCTATTTCGGAAGGAGTATGCAGACTTAGATGAATGTCCAATCTGCCATGAAAGTAGATGGAAAGAAGGGTCTAGTACCACAAGCGAGGCCAATTCTAGCTGTAGAACCAAGAGGCGTATTCCACGCAAAATACTACGGTACTTCCCTCTTACTCCTCGATTACAACGGTTATATATGACCGAGACTACCTCGTCGCACATGAAATGGCATAAGGAGGGTCGAGTGAGTGATGACACAATGAGACACCCAGCAGACTCATTAGCATGGAAGCATTTTGATGATATACATACACAATTCGCATCTGATGTTCGGAATGTTAGGCTTGGGCTTGCATCCGATGGATTCAATCCATTTGGGATAATGAGTGTTTCATACACTACGTGGCCTGTGATATTAATCCCATATAACTTGCCACCTTGGTTGTGTATGAAACAACCGTATTGGATTATGTCAATGCTTATACCTGGCCCTAAATCTCCAAGAAATAACATTGATGTATACTTACAACCCTTGATTGATGAGCTCAAAGAACTTTGGTCAAATGGTGTTTTGACATGGGATGCTGGAAAGAAAGAGAATTTTAGGATGCGTGCTGCCCTTTTATGGACAATAAAATGACTACCCAGCTTATGGAATGTTATCTGCATGGAGCACGAAAGGAAAGTTAGCATGCCTTTGCTGCCACAAAGATACTGACTATTTTTGGTTAAAGTTTTGGCATAAGTATTGCTACATGGGCCATCGCCGCTTTTTGCCTTTGACCCACAAGTGGCGGCGAAACAAGGAGTGTTTTAATAATAAGATTGAAAAGAGAGCTGCACCAGTGCCATTAACAGGTGATGAAGTGCTAAAACAATATGAAAGTTTTGATCAAGTCATTTTTGGGCGGGCCACAAAGAAGAGAAAGCGCGACGAGGAAACTAGATCGTACAACTGGCGAAAAAAAAGTATATTCTTTCAGTTACCATACTGGGAGACTTTGCTTGTAAGGCATAATTTGGATGTGATGCACATTGAGAAGAATATTTGTGATAGTGTACTTGGCACTTTTCTTGATATGGAAGGTAAATCCAAGGATAATTTGAAGGCTCGTCTTGACATGCAGTTTATGGGGATACGAGAGGATCAACATCCTTTGGTGCAAAATGATAAATACATCTTGCCACCAGCATGCTATACTTTGAGTAAGGATGAGAAGACCTATTTATGCAAATTTTTAGAAGGAGTTAAAATGCCTGATGGTTATGCCTCAAACATAAGGAGATGCGTGGATGTTAAGGGTTGTAAGGTGTCTGGACTTAAAACTCATGATTGTCATGTTATATTCCAGAAACTTCTTCCCATAGCTATACGCAAGATATTGCCTGAAAAAGTAGTAGTTCCATTGATTGAGCTTAGTAAATTTTTCAATGCAATATGTTCCAAGGAGTTGAATGATGAAGATTTGAAGAAATTGAGCATTTCAATCAGCGAAACTCTTTGTGAGCTAGAGATGATCTTCCCACCAGCCTTTTTTGATATCATGATGCATTTGCCTATTCATCTTGCTGAAGAAGCTAGACTTGGAGGACCTGTCTGTTCTAGATGGATGTACCCCATAGAGAGATATTTGCGTACACTTAAAGGCTATGTGCGGAACAAAGCCCACCCCGAAGGTTCCATTGCAGAGGGTTATGTAGCAGAGGAGTGCATGACCTTTTGTTCTTGCTTTTTGGATAACATTGATACAAAACTTAACCGGCCAGAGCGACATGAAAGTGCAACTATAAATGAACCACCATCAGGACTAAGCATATTCTCCACAATAGACCGCAACAAGAAGGGGTTCACCTTTGAGTTACTTTCTAAGAATGACATGAAACAAATTAGGCATTATTTGTTAACAAATTGTGAGGAAGCGACTCCATGGGTCAAGTATGATATTTTTGTGCTTTTTTCCTTAATGTCATGCTCATTAATTTTATTTACTCAACCAATATATTCTTCTTGTAGTGAACACATTGATGAACTGAAAATAAAGAATCCACGTAACATTCAGAAGCGACACAAAGATGAATTTGTAGATTGGTTTGAAAATAAAGTGAGGATGATCTACATATTTTAGTTTTTGTTTACATTGAGACTTATTTTTATCATAGAAAACTAATAATTTCCATGTATTCTTGAGCCCAGATTAGCAAACTCCATGGAGAAGGAAAAACAAGTGATCTTTTATATGCACTTTCTAGAGGGCCTGACCATCGAGCACGTGTTTACAACAGGTGTATGGTTAATGGTTTTTTGTTTCGAATAGCTCGCATAGAAAACAACCTCAATACCCAAAATAGTGGTGTAGTTGTGAGAGGTGACGATAGCACCGGCAATATTGATTGGTTTGGCGTGATTAGAAAAATTGTTGCTCTAGAGTTTGGATTGGATAAGGAGGTTGTCCTGTTTGAATGTGACTGGTATGATATTCCTCCTGCAAATAGAAACCAAGGTAGAGGCTTTAAAAAGGATAAGTTTGGAATTATTGACATCGATACAACTCGATTTCGATACAAAGATGAACCTTACATTCTGAGCATTCAGGCTGAGCAGGTATTTTATGTGAAAGATGTAAACAAACCAAACTGGTCCACTGTTGTAAGAGTTAAGCCTAGAAACCTTTTTGCCATGCCTCAAGCTGAGATGGAAGCTGACATTGACTCAATTAATGTGGGAGTGGAAGAAATGAACATACCACGAACTAATGAAGATATCACAAACTGGAGTAGAATTGATATGGAAGGAGTAAGTGGTGATGCTTCTGTAATTGAAAAAGCACATGCTGCCCAGTCCACGTATGAGGATGGTGATTCAGAAGAGGATGAGGAAGAGGATGATACCTACATTGACGATGGACACGTTGCACCTACACATTTAGTAGACCAGGACTCAGATGATGAATTCTTTGTGTAATCTTTTTCTTTGTTATTGATTTTTATCTAAAAATCTTAGTGGTGCTGGCTTTCTGCCTCTATTACCTTGTATTAGCTTTACAAATATTATGTGTGATACGTTTTGCTATTTTGCTACCTCACAAAGCATTCATATCATTTGTTTTTGCACGAATTGTGTTTGTCAAATTTATTTGATGGCAGCACTGTAACTTCTTATTTGCAATTCTGAAATATGCTGAGAAAAAGAAACTCGCACAATTTTTTTCATTTTTGTTGCAGATCCACCAGCACAGGGTAGGAAGGGTGCATATATATAGTCTCTCTTTGTAATTGACTTGAAACGTCCTGCACACAAAGACTTCAGCCATCTCAAGGTGTAAGGTATACTATTCTCTATCAATACTAAATGTTCTTCTACTACTACTTCCTCTACAGCTGATTTGCAACCAGCTACTGCATCCTCTACCTCTGCTTCTTCTACTTCTGTTGCTGCACGGTTTCCAACTTCTTTCTCCTGCGTGTATAACTTCAGAATTTGTTCTCATACAATTCTCTACGATTCAAAATGGGACGCTATTGTTGTAGTTCTCTATTACCTGACATCTAGAATATTTTAGCTCACCACTTTTTACTGAATATATACATATTGTAGAGTTTTTCATGTAACTAATACTTGGTGTTTTTTCTATGTGGTGTGTAGGATGGCCGAGGACACCTGGACAATAATTCTTCAACTCGATGGGGCAGCTCCAGAACATGAACTTGTACAGAGGGAAATGGACAAGGACCTTTTGTGCTTTTTCAACTTAATTGGTTTGATTCAAGAATATGGGTTCACAGCACTGGACTACATGTACTACAAGAAGAGAGAGAGCAGTTCAATGGCCACTCTAGTAGGAATACAAACTGATAGTGATGTGCAAAGAATGGTTGCAGCCCATGAAAGTGAAAAGAAGGTCAGAATATGTGTGAAGCGGGAGAAAGCATGCGTGGATAGTAGAGTTAGCATAACACCTGTCAAGTCCTCGAATGAAATGGCTAGATCTGAATCAGATGAAGCTGGAGAAGGTAAGTATACTTGGATAACTCTTAATTTCTGTTGAGTTAACTTCAGTGCTCAACTCCATAATAATGTGGTACCATCAAGTCGTTAGCGTTATATTCAAGAAGTGCAGCAATTAACTAAAAAATATTTTGTCATATAGCATGCGCAGCAATATTCCGAGAGGACTCAATCAAAGCATACAAGAGTTCAGAGGCTAGAGTACAAATATTAAATACACTCCGAAAACGCAGGGAACAAGAGAGGGGTAACTATTTTGCCCAACCATATGCACTGCATATTCATATTAATTTCCATTTTCATGATATACTTTAAAAAACTATCTGTTGAACGTCAGTGTTCATCAACAAATGTTAGTTCTGAACAACATAGTGACCTTGATGATCTGGAAACCAACGATACAAATCCATCACCAACAGATTGGCCATCTCATGCTCGACGGTGTCGTACACAATCAGAAGGTAGTACGGTTACAAAATCATTATTTCATATGTTCCTTTTCATTTGTATGGAACATCAACACAACTATTGTCTTAATATGCAAACTATTTCTAATAAATTGCAGATATGGACCAATCACACAAGAAAGGGCGTGGTACACATAAAGGTTTTAAAGTGGCTAAAAAAAGATTCAGTAGTGGTTCTCAGAAACTCCAAATTGAATTCTCTACGAGATTGGGAGGTCCCATAGGAATAAACCACCGCTCTTTCGTAGAGGAAGTTGTTATGTATACAAAAAAGAAGGCACCACTAATTGGAGTTAGAACGTGGAAAGATATACATGAGACAGTGAAAAAATCTATAGTTATTGATGTGCTGGTCAGTACAATGCCTTTATTGTCGTTAACACAATTCATTTCTAAATAGCTAAAACTAATTTACTTTCTCTCTTGTCAGGCTAAGTGGGACCTCGCAGACACAATAAGTACAAGGAACAAGATTAGGGACATTGCAAGGGAGCGTTACAAAGGATGGCGCTCAAATTTGCATGCTACATTCCAAGCATATAGTACGGATGGTCTGCGATTTAAAAATAAGCCAGAAGAACTAAACATTCTGGAATGGGAATATCTGATACACTATTTTGGGACTGATAAAAAATTCTAGGTTATATGATTTACACATTTGATTTTGTAAATTTTTGTTTTCTTCCAATGCTCTTACTTCTACTTATGGATACAGGAGATGAGCCAAAAGAATTCTGAAAACCATAAGAAGCAGAGGACTCTTCATGTTACTAGTGCAAAATCTTTTTCACAGACCAGCTATGAGAAGGTACATCTAGTATTTTAGTTATCTTTGCTATGAGAAATGACCTATTTGTTAACATGGTATAACTTTGTATTTACAGAGAGATAAGGAAACAGGGGAAGAGCCAAGTATACTTGACTTATGGCAAGCTACTCATATGAGGAATGGTGAATGGTCGAACATTGCATCAAAGGATGTCTATGTAAGAAATATTCTCTTATGAAATATTTTATTGTTCGCTATTGTAGTGCATTGGAGTAACATATGCATTCTTTTCCCCTTAGGAAAATGCACACAATGAGATCAGTGAGAGAGAAGCAGATACAGGAAATGCAATAACAAATGAAGAGCAAAACATTGTTTTCCAAGCATGCTATAGGGACTCTACAGGTTGTAAAACATCTCAAGCTCGTGGACAAGGTTACATGGCTAAACCTCTAACCACTACAGCAATGTTGCATGCTAAATTGGATGAACAAGCTCATGTAACTTCTGAAACCCAGCAACAGAATGATAAGCTCTCTTCTGAGGTTGAGGAGTTGAAAGCAAAACTTGCAGCTCGAGAAGAAGAAAGTGATAAGGCACTTCAAGCAGAGCGCAATGAAAGGCTTCGATTTGAACAAGAAGAACGGAATGCAAGGCTTAAAATGCAAGAAGAAGAACGTAAGGAAAGGGAAATGCTACGGGAGGATATTCTCAAAATGATTACTACGCAAAGCGTAGCATCGGAACAACAGGTAATGATTGCCAAAATGTTCACATTCACCAATATTTGATATCTTATATATGTCAAATGTGGAATCATAATATATATATTTCTTGTTTTATGGTGTGAAGTCTGATCTGACAATAGATTGTCCAACTGAGAATAGAGAACCACATGACACAACAAAGAAGGCTCGAAGCATTCAGAACAACACAGTTGTGAAAGCACTTTTTAACAACGCTAATTTGCAAGGAACAACAAGTACTACCCGGCAAAATATTTCTTCACAACATCTTAGGAATGTTGCTAGAAATTTTGTACGGTCCCGAACTGATCAGGTAATTACAAATCTTCAGCAAGCTGCTATGTTTAAATGATCTTTTGCAAAAAATTTTACAATATGTTTTCCTGCTCATGGTCTGTTTGTAAAAAAATAATTTCTTATTGTGTATGGCCAAATCCTGTAACAGGCCAGAGGAGAAAAATGGAAGAATGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010402