BGIOSGA010410

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Revision as of 09:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010410| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010410, complete gene.| tag = OS03G05...")
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Gene Name

BGIOSGA010410

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010410, complete gene.

LocusTag

OS03G0569000

Ensembl Transcript ID

BGIOSGA010410-TA

Ensembl Protein ID

BGIOSGA010410-PA

Length

5163

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23124501..23129663

Sequence Coding Region

23129488..23129663,23128438..23128707,23127215..23127334,23124501..23127114

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23124501..23129663 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23124501..23129663 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCCGGACAGACTGCCATTTGGACTTGGTTTTGATAGAGTACAAGCATCAGGGGGATATAGATGCTCTGAGCAGTATGAATGGCAACGTTTGGCCCTTCGTCAAAGAGAAGCAGCAAGGGAGAAACCCCACTGTGGTGCAACCCTGAATTACCCTTTGCTTTCACATCGCAGAGACAGGATAGAAGATTCTGTTGCTGCTACAGAAATTCCACATCAGTTTAGAGGACATGATTTGCTGCATAGTCATGGCAAAACTTTGAATGATAGAAGTTGTAGCCATTCTTTTAGGGAGGAAGAAACTAAGGATCTTGTGTCCTCCTCACATGATGATGCTGAAACTGAGAAGAATTTTGCTATATGGGACCAACCTCTTGATCGAACTGGACTCCTGGAGTCAAAGCGACACAGGCGCAGCTCCTCCCCTAGATATTGTATGAAGAGTTATCCCTTTGGAAATAAGATTGATGGATATCATGGTGAAGGTCGTGCTTGTCCTCGCGATTCATCAAAATGGGGCAACCATAGTCTTTCTCCTGATCATGCTCCGACAAGTTGTCTAAGGACTGAGGGAGAAGTTCCTTCCCTCAATCGTGTGTCTGAGTATGCAAAAGGTGCAGATGGACATATGTGTACAACAGAAAGACTTGGGGACTTCTTTTCATCTAATCAGGGGAGTTGCACACAAAATAGAAGTTATCAAGAAGTTCAACGTCTGCCAACTGAAGTTAACTTCCCAAATGCCCATTTCTCAGCGATAGATAAAGCAAGGCATCGATCTTACATGGAAAAGTTCCAGACTTGCAAGAAGCATCAGGGCACCTGTTCAAAAGATTTGATGTTTAATATTTCTGATCACTCCTTGGTTGGTCGAACATGTCATAGGTTTGAAGTAGGGAGAGCTCACACCAGTAAGGCATTTGATGAATTTCATGCATTCCATCATGAGCAACTTCACCAATCTCCACGTGATAATTTTAGGGACCAATTGGGTAGCAGTCGAAATTTCAGGAATGTTCATAAAGGAAAGATGTCAAGAAGGCAATGCACAAAACATGATCTCAAGAAAAAGAATTCCAATGTTGCTTTTCATAGTACGTATGGGAGAAACAGTGACCGGAAAAGGCATGGCAATCATCTGGATGGACATAGAGCTAAGAGGAATATGCCGTCTGAAAATCAGTCTAAAGAATCCTGCTATCCGAACATGAAGGATTGGCAATCATATTCTCATGGTGATGTACGCCAGAGTGGTGATAATCAGGAGGGAAATACCAAAAAAATCAAGAAAGGAGGTCAAAATGGAGAAAAAGGGAACTATCATCGAAACAACAATATTCCAACTGTTGTATGTAGTGGCTCAAAGTCTAATGAGAATTCAGGTTTGTTAAGTCCTAAGTGTAGAAGTAAAACCATTATGTCATCAAATGGACCAAAACAAAGTGAAGGAAGTGAGAACATTAAGTTAGAGTCTGATAAGAAGCCTAGTTTGGTTGTTTGCACAAAAAAAACAGAAGACATGAAGAGTGATGAGGTTTCGAATGGTAAACTACAAGATGCTCCAGTCACCTATGTGGAGAATGGTGTGAAAGAATCAGATAATGCTTCTCCGTCTGAACTACTTCGTGATTGTTTGATTATATGGAGAAGATTGAAGAAAGATAATTGTGCTGAAGCTGAAAATGTAAAAAAAACCAATACAAATCGGACAGTGCAAACAAGCAAGGTATCTGTGAGCGAAAGATTGAGAAATGGAAGACCTAGCTCAGGATTTGATGATGAAAACAGCAGCACATCAGGGAGTGCTTCTGTTAGCTCAGAAAGCGATGATGAAAGTAATAGTCCATCTGAGGACTCCAAACAATGTAGAGGTGTAATGTCATCCAGTGAAGCACAAAAGTGTAGCAAAGGAAGAACTGAGAGAGAGTCAGAGCAACCCTTCAAATCCCTTAGTGGCGACAATCGCATGAAAAGCCCACAAAATACAATAGCTGAGAAAGGACTAATGTTTTATCAGGATGTTCCACCAGAAACAAATCCTAGTGAAGTTATGCAGCAGAAAGAACAAGATGACCTTTCATGTTGTTGGAATGGCTGTTCTGATACTAGCACGAAACCAGTTGCTGATTCTCATCCGGAAAGTAGTGTGCATCAGAAGTTTTCTCAGCAGGGAGCAATTGAAGGTCATTCCAACGCAAGGAGCAGACATGAATTGGTTGTTGGCTGTGACATTGAAAATACACTGGAAGCTGATGGTGCCAAATCAGGTGAGCAATCAACTGTTCCGGAATTGCTGGACAAAAAAGCTGCTGTTCTTTGCTCAATGGATGATGATAGTGTGAAGGTAGTAAATGTGTCAGCGTGTTCAAATCAGGACAGTGACACTACTCCGTGCGGTGTGACAAAATTGGATAAAGGAACTGCAAACAAGTTCCTAGAGAAGCCTGTCAATCTTTCCACAGGAAGTAACTTTAGAGTCATCCAATGGGGCGCCGTGGATTGCAACATTGTGAGAATCAAACAAGAGAATTCACAACATGCAGACTCTGAACAGGATACACATCATAAAGAGAGTGGGGAACCATCACAAGCTCTCAAAGTGGCATCAAACCAACAAATACCCCATCAGTTTGATTCTGACAGAGATAATCCTTGTACTACTAGACAAGCTGATTGGGATTCATGTTCCTCGATACCAGACTTAAATTGCTTGCCTAATATGAATACAGATGATGAGCTAGAGCCAGTTGAGAATGTGACTTTTCAGGTAAATGGGGATGGTACAAATCCCCAGAATAATATCAAGAGTCTTTCAGCTTCCTCTTGTAAGCCCACTCTGCAGAAAGAACAGTCTAAGCGACCTGAGCCAATTGAACTTACTGGAGGAATTTGCGAAAGGAAAGATGGAAATAGGTTCCAGTCACCTAATTCACATAGTGGACCATCTCAGCAAAGCATAGTTGAAGAAAGTAGCATGTCCATTGATGTATTCAAGTGTAACCTCTGTGAATTCATAAAAAATATCATAAAGCCATTGTGGGAAGATGGGCTGTTATCCCGGGAAGTCCACAAAATTATAGTGAGGAAGGCTGTGGAAAAAGTGACCACCGTGTTGGGCTCAAAGGTCCCTCTGACAGAGATAGATGCTGTAGATTTTGTAGAAGAATCTCAGAATTAA</cdnaseq>

Protein Sequence

<aaseq>MGPDRLPFGLGFDRVQASGGYRCSEQYEWQRLALRQREAAREKPHCGATLNYPLLSHRRDRIEDSVAATEIPHQFRGHDLLHSHGKTLNDRSCSHSFREEETKDLVSSSHDDAETEKNFAIWDQPLDRTGLLESKRHRRSSSPRYCMKSYPFGNKIDGYHGEGRACPRDSSKWGNHSLSPDHAPTSCLRTEGEVPSLNRVSEYAKGADGHMCTTERLGDFFSSNQGSCTQNRSYQEVQRLPTEVNFPNAHFSAIDKARHRSYMEKFQTCKKHQGTCSKDLMFNISDHSLVGRTCHRFEVGRAHTSKAFDEFHAFHHEQLHQSPRDNFRDQLGSSRNFRNVHKGKMSRRQCTKHDLKKKNSNVAFHSTYGRNSDRKRHGNHLDGHRAKRNMPSENQSKESCYPNMKDWQSYSHGDVRQSGDNQEGNTKKIKKGGQNGEKGNYHRNNNIPTVVCSGSKSNENSGLLSPKCRSKTIMSSNGPKQSEGSENIKLESDKKPSLVVCTKKTEDMKSDEVSNGKLQDAPVTYVENGVKESDNASPSELLRDCLIIWRRLKKDNCAEAENVKKTNTNRTVQTSKVSVSERLRNGRPSSGFDDENSSTSGSASVSSESDDESNSPSEDSKQCRGVMSSSEAQKCSKGRTERESEQPFKSLSGDNRMKSPQNTIAEKGLMFYQDVPPETNPSEVMQQKEQDDLSCCWNGCSDTSTKPVADSHPESSVHQKFSQQGAIEGHSNARSRHELVVGCDIENTLEADGAKSGEQSTVPELLDKKAAVLCSMDDDSVKVVNVSACSNQDSDTTPCGVTKLDKGTANKFLEKPVNLSTGSNFRVIQWGAVDCNIVRIKQENSQHADSEQDTHHKESGEPSQALKVASNQQIPHQFDSDRDNPCTTRQADWDSCSSIPDLNCLPNMNTDDELEPVENVTFQVNGDGTNPQNNIKSLSASSCKPTLQKEQSKRPEPIELTGGICERKDGNRFQSPNSHSGPSQQSIVEESSMSIDVFKCNLCEFIKNIIKPLWEDGLLSREVHKIIVRKAVEKVTTVLGSKVPLTEIDAVDFVEESQN</aaseq>

Gene Sequence

<dnaseqindica>1..176#957..1226#2330..2449#2550..5163#ATGGGTCCGGACAGACTGCCATTTGGACTTGGTTTTGATAGAGTACAAGCATCAGGGGGATATAGATGCTCTGAGCAGTATGAATGGCAACGTTTGGCCCTTCGTCAAAGAGAAGCAGCAAGGGAGAAACCCCACTGTGGTGCAACCCTGAATTACCCTTTGCTTTCACATCGCAGGTTAGCATCATTTGCATCAATTTATGGAGAAAATTGCATATCTACCATCGCATAAGATTGGATTCGCTGGAATACCATCACTTAAATTGGCTTCGCTAGAATACCATTCTCAATCAAGACATTCGCCAAAATACCATCATGGACGGAAATACCCTTGGCCCTTCTTCCTCCCTCCAATGCTAGAAGAGCTTGCCGGTGGCCCGTCTTCATCTTCCATCCTGGCCGCCACGCCAGGGCTCGGGGAGGACGCAGCGGTGTGGAAGTTGTAGGAGATCCACGCGCGCGGGGGAGCTGGAGGAGGCCATCGTCGCCGTTCCCTCGTTGCGTCGGAGTTGAAGGAGCCCACCACCGGCCGCTCCTCATCTTGCCCATTGGCTGCCGCGCACTTTGCCACTGCTGCTGTTCCCTCATTGCGTTGGATTTGAAGGATGCCGGGGGCATCATGTGCGGATTTGGAGATGGCTAGCCATCGTGACAAGGCTCGAGGGTGCTGGCGCAGTGGCCGGGATGGAAGGCGGAAACGACGGGAGGGCTGCCGGCAAGCTCTTCCAGCATTGGAGGGAGGAAGAATAAGGGCCAAGGCTATTTCTGTCCAGGATGGTATTTTGGCAAATATGCCCTGGTTGAGAATGATATTCTAGTGAAGCCAATTTAAGTGATGGTATTCTAGCGAATCCAATCTTATGTGATGGTACATATGCAATTTTCTCCAATTTATGGTCGTCATGTTGTTAGTTTCTCTATCCAGTAGTAGTTTCACTAATGCAATTTATGATGCAGAGACAGGATAGAAGATTCTGTTGCTGCTACAGAAATTCCACATCAGTTTAGAGGACATGATTTGCTGCATAGTCATGGCAAAACTTTGAATGATAGAAGTTGTAGCCATTCTTTTAGGGAGGAAGAAACTAAGGATCTTGTGTCCTCCTCACATGATGATGCTGAAACTGAGAAGAATTTTGCTATATGGGACCAACCTCTTGATCGAACTGGACTCCTGGAGTCAAAGCGACACAGGCGCAGCTCCTCCCCTAGATATTGTATGAAGAGGTGTGTATATGTTACCAAACTATTGACATTCATAAATTTGGTTAATCCTGTAGGAATAAGTCTTGGCTGGTTGGTCTTGGTCTTGTGGTGCCTTTTCCTGCTTTTCAGCTTTCTAGGACAGCATCTCTACTTTCAGTTTGAATGCTCTAGGACAGTTAGGACAGCAGTTTGTTGAGATGCTCTAGGACAGTTTGTTGGGATGCTCTGCTCTAGGACAGTTTGTTGGGATGCTCTAGGACAGCACCCTCTTAGACTAGCATGGCTGCATGGCTGCTACAAGCAGCTATAAATATGTATCCAATCCTCTTTGGGAGGACATGGCTTTTGTGTTTAGTGAATGAAGAAAAACCAGAAAATTGCCCCATCTCGAGTGCCATCCTCTTCTCAATGAGAGTAACCATTGAAATTCTAACAAATCCTGCCATATTTTTTGTTGAGTCGATAAAATTATAGCAAAAAATATAGATTTAAGAGAGATGATCGTATTTAGGAATTAGAATATCCATCCCTACCACTTTGAAGTATGACCTGACAAGAGGGCTCAACTTGTAGCCTCACAAAGCATCACGCAGCATGTTTCACCAATGGAAGCAAAACATGAGTTGCATACGTTGCCACTTACTGTCCAAGCGACTGACTATCTCCTGCCAAGGTGCTACCACTGGCTAGATTGCCCCGTGACATGCAAGCCATTTTCTAGGGTCATGACTGTAACTGTTATTGATCTTGCCACTGCAAGCCTGCTTTGAAGAAAGACTTTTGGAGCTTTGTTCTTTTCTGCTTCCATTTGTGTAAAGACATGAGGCTGCAGGTGGGGCCCTCTTGTTATGTTATCACTGCTAGCGATGGAGATTGTAAAGTCTAAAATTTGTAGTTTTGCGGTAGAGAAGTACTCTAGTTTTGCAATATAGTTTCTCTAAATCTAGTTTTGCCATAATTATATGTGATTTTGTGAAATTTACTCTTTTATTTCCCACTTTGATGTTCTCGCATGTTGTATTGGTCAATATTCTGCATTTTATGATCTGTGCATTCCTTAAAGATTTCCTTCCTAACAAAATAAATATGTGCACCATGTTATGATCTATCTTCTGTTATTACAGTTATCCCTTTGGAAATAAGATTGATGGATATCATGGTGAAGGTCGTGCTTGTCCTCGCGATTCATCAAAATGGGGCAACCATAGTCTTTCTCCTGATCATGCTCCGACAAGTTGTCTAAGGTAATATTTTTTAGGTGCAGATCTAGATTTTTCGGTGGCAGCATGCACCTGTTTATGTGTATTACTATTATCTGATTCAATTGTTTGTTCCTTAATCTAGGACTGAGGGAGAAGTTCCTTCCCTCAATCGTGTGTCTGAGTATGCAAAAGGTGCAGATGGACATATGTGTACAACAGAAAGACTTGGGGACTTCTTTTCATCTAATCAGGGGAGTTGCACACAAAATAGAAGTTATCAAGAAGTTCAACGTCTGCCAACTGAAGTTAACTTCCCAAATGCCCATTTCTCAGCGATAGATAAAGCAAGGCATCGATCTTACATGGAAAAGTTCCAGACTTGCAAGAAGCATCAGGGCACCTGTTCAAAAGATTTGATGTTTAATATTTCTGATCACTCCTTGGTTGGTCGAACATGTCATAGGTTTGAAGTAGGGAGAGCTCACACCAGTAAGGCATTTGATGAATTTCATGCATTCCATCATGAGCAACTTCACCAATCTCCACGTGATAATTTTAGGGACCAATTGGGTAGCAGTCGAAATTTCAGGAATGTTCATAAAGGAAAGATGTCAAGAAGGCAATGCACAAAACATGATCTCAAGAAAAAGAATTCCAATGTTGCTTTTCATAGTACGTATGGGAGAAACAGTGACCGGAAAAGGCATGGCAATCATCTGGATGGACATAGAGCTAAGAGGAATATGCCGTCTGAAAATCAGTCTAAAGAATCCTGCTATCCGAACATGAAGGATTGGCAATCATATTCTCATGGTGATGTACGCCAGAGTGGTGATAATCAGGAGGGAAATACCAAAAAAATCAAGAAAGGAGGTCAAAATGGAGAAAAAGGGAACTATCATCGAAACAACAATATTCCAACTGTTGTATGTAGTGGCTCAAAGTCTAATGAGAATTCAGGTTTGTTAAGTCCTAAGTGTAGAAGTAAAACCATTATGTCATCAAATGGACCAAAACAAAGTGAAGGAAGTGAGAACATTAAGTTAGAGTCTGATAAGAAGCCTAGTTTGGTTGTTTGCACAAAAAAAACAGAAGACATGAAGAGTGATGAGGTTTCGAATGGTAAACTACAAGATGCTCCAGTCACCTATGTGGAGAATGGTGTGAAAGAATCAGATAATGCTTCTCCGTCTGAACTACTTCGTGATTGTTTGATTATATGGAGAAGATTGAAGAAAGATAATTGTGCTGAAGCTGAAAATGTAAAAAAAACCAATACAAATCGGACAGTGCAAACAAGCAAGGTATCTGTGAGCGAAAGATTGAGAAATGGAAGACCTAGCTCAGGATTTGATGATGAAAACAGCAGCACATCAGGGAGTGCTTCTGTTAGCTCAGAAAGCGATGATGAAAGTAATAGTCCATCTGAGGACTCCAAACAATGTAGAGGTGTAATGTCATCCAGTGAAGCACAAAAGTGTAGCAAAGGAAGAACTGAGAGAGAGTCAGAGCAACCCTTCAAATCCCTTAGTGGCGACAATCGCATGAAAAGCCCACAAAATACAATAGCTGAGAAAGGACTAATGTTTTATCAGGATGTTCCACCAGAAACAAATCCTAGTGAAGTTATGCAGCAGAAAGAACAAGATGACCTTTCATGTTGTTGGAATGGCTGTTCTGATACTAGCACGAAACCAGTTGCTGATTCTCATCCGGAAAGTAGTGTGCATCAGAAGTTTTCTCAGCAGGGAGCAATTGAAGGTCATTCCAACGCAAGGAGCAGACATGAATTGGTTGTTGGCTGTGACATTGAAAATACACTGGAAGCTGATGGTGCCAAATCAGGTGAGCAATCAACTGTTCCGGAATTGCTGGACAAAAAAGCTGCTGTTCTTTGCTCAATGGATGATGATAGTGTGAAGGTAGTAAATGTGTCAGCGTGTTCAAATCAGGACAGTGACACTACTCCGTGCGGTGTGACAAAATTGGATAAAGGAACTGCAAACAAGTTCCTAGAGAAGCCTGTCAATCTTTCCACAGGAAGTAACTTTAGAGTCATCCAATGGGGCGCCGTGGATTGCAACATTGTGAGAATCAAACAAGAGAATTCACAACATGCAGACTCTGAACAGGATACACATCATAAAGAGAGTGGGGAACCATCACAAGCTCTCAAAGTGGCATCAAACCAACAAATACCCCATCAGTTTGATTCTGACAGAGATAATCCTTGTACTACTAGACAAGCTGATTGGGATTCATGTTCCTCGATACCAGACTTAAATTGCTTGCCTAATATGAATACAGATGATGAGCTAGAGCCAGTTGAGAATGTGACTTTTCAGGTAAATGGGGATGGTACAAATCCCCAGAATAATATCAAGAGTCTTTCAGCTTCCTCTTGTAAGCCCACTCTGCAGAAAGAACAGTCTAAGCGACCTGAGCCAATTGAACTTACTGGAGGAATTTGCGAAAGGAAAGATGGAAATAGGTTCCAGTCACCTAATTCACATAGTGGACCATCTCAGCAAAGCATAGTTGAAGAAAGTAGCATGTCCATTGATGTATTCAAGTGTAACCTCTGTGAATTCATAAAAAATATCATAAAGCCATTGTGGGAAGATGGGCTGTTATCCCGGGAAGTCCACAAAATTATAGTGAGGAAGGCTGTGGAAAAAGTGACCACCGTGTTGGGCTCAAAGGTCCCTCTGACAGAGATAGATGCTGTAGATTTTGTAGAAGAATCTCAGAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010410