BGIOSGA010416

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Revision as of 09:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010416| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010416, complete gene.| tag = OsJ_114...")
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Gene Name

BGIOSGA010416

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010416, complete gene.

LocusTag

OsJ_11472

Ensembl Transcript ID

BGIOSGA010416-TA

Ensembl Protein ID

BGIOSGA010416-PA

Length

4112

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23038407..23042518

Sequence Coding Region

23042223..23042518,23041429..23041669,23041266..23041346,23040446..23040553,23040219..23040338
,23039313..23039480,23039148..23039234,23038407..23038520

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23038407..23042518 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23038407..23042518 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCCACCACGTCCCGGCGCGGCCCCGGCGCCATGGACGACGAGAACCTCACCTTCGAGACCTCCCCCGGGGTCGAGGTCATCAGCAGCTTCGACCAGATGGGGATCCGCGAGGACCTCCTCCGCGGCATCTACGCCTACGGCTTCGAGAAGCCCTCCGCCATCCAGCAGCGCGCCGTCCTCCCCATCATCAGCGGCCGCGACGTCATCGCCCAGGCCCAGTCCGGAACCGGCAAGACCTCCATGATCTCGCTCTCCGTCTGCCAGATCGTCAACACCGCCGTCCGAGAGGTTCAGGCCTTGATACTCTCACCAACTAGAGAACTTGCTGCACAAACAGAAAGAGTTATGCTGGCCATTGGTGATTACATCAATATCCAAGTGCATGCTTGTATTGGTGGCAAAAGTATTGGTGAGGATATTAGAAAGCTTGAGCATGGAGTGCATGTTGTGTCAGGAACACCTGGCAGAGTCTGTGACATGATCAAGAGAAGGACCTTGCGTACAAGAGCCATTAAGCTCCTAATTCTGGATGAAGCCGATGAGATGTTGGGCAGAGGCTTTAAGGATCAGATATATGATGTCTACAGATATCTACCCCCAGAGCTCCAGGTTTGCTTGATCTCCGCAACTCTGCCACATGAGATCTTGGAAATGACCAGCAAGTTCATGACTGACCCAGTCCGGATCCTTGTAAAGCGTGATGAATTGACCCTAGAGGGCATCAAACAATTCTTTGTTGCTGTTGAGAAAGAAGAATGGAAGTTTGATACTCTTTGTGATCTTTATGATACACTGACAATCACCCAAGCTGTCATTTTCTGCAACACGAAGAGAAAGGTTGATTGGCTTACAGAAAGAATGCGCAGCAATAACTTCACGGTATCAGCTATGCATGGTGACATGCCTCAAAAGGAAAGGGATGCCATTATGGGTGAATTCAGGTCTGGTGCAACCCGTGTTCTAATTACGACAGATGTGTGGGCTCGAGGCCTGGATGTTCAGCAGGTCTCTCTTGTCATAAACTATGATCTTCCAAATAATCGTGAACTTTACATCCATCGCATTGGTCGCTCTGGACGTTTTGGTCGCAAGGGTGTGGCCATCAATTTTGTCAAAAAGGAAGACATCCGTATCCTGAGAGATATTGAGCAGTACTACAGCACACAGATTGATGAAATGCCAATGAATGTTGCTGATCTAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAATTSRRGPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVNTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMNVADLI</aaseq>

Gene Sequence

<dnaseqindica>1..296#850..1090#1173..1253#1966..2073#2181..2300#3039..3206#3285..3371#3999..4112#ATGGCGGCGGCCACCACGTCCCGGCGCGGCCCCGGCGCCATGGACGACGAGAACCTCACCTTCGAGACCTCCCCCGGGGTCGAGGTCATCAGCAGCTTCGACCAGATGGGGATCCGCGAGGACCTCCTCCGCGGCATCTACGCCTACGGCTTCGAGAAGCCCTCCGCCATCCAGCAGCGCGCCGTCCTCCCCATCATCAGCGGCCGCGACGTCATCGCCCAGGCCCAGTCCGGAACCGGCAAGACCTCCATGATCTCGCTCTCCGTCTGCCAGATCGTCAACACCGCCGTCCGAGAGTACGCCTCCTCTTACTCTTACTACCCCCATCTTTTTCACTACTAGCTGCCAGACATTTTACTTGTTTGCGCCCTTTTCCGAATGCGCGATTTATTTTACTTCAGATTAGCTGTTAGGTACAGTGCAGTAATTAGGACCTAAATAAATGTCTGGATAGGATTCATTTTTATTCCTTACTGCAACTCTCGACGTTTGTGTAGATTTGCTATGGTTGTGACTTGGCCTCCGAGCTATTTGATTCAGGGCACCGCAATTTGTATTCTGACTTTCTATGTCAAGGCTCATGTTTTTATCTGTTTTTTACCTTATATATTGCTATTGCTATAATATTTTCTTTCCTGATCTTTCGTCGGCTAATAATTAGGGCTAGGAATTTATATTTTTTGAAAGAAAAAGAAACTAGGTATTGTATAATGTAGTGATGGCATCCATGTTAATTATATGAATTTTTCTATGCCTTGTTCTACTTATTAATGATTATTCCCTGTCATTTTCTATGTTCCATTAATCGTTATGTCTGTTGGTAGTTAATATTGTTTCTTCATTTTAAAGGGTTCAGGCCTTGATACTCTCACCAACTAGAGAACTTGCTGCACAAACAGAAAGAGTTATGCTGGCCATTGGTGATTACATCAATATCCAAGTGCATGCTTGTATTGGTGGCAAAAGTATTGGTGAGGATATTAGAAAGCTTGAGCATGGAGTGCATGTTGTGTCAGGAACACCTGGCAGAGTCTGTGACATGATCAAGAGAAGGACCTTGCGTACAAGAGCCATTAAGCTCCTAATTCTGGTTAGTTTATTTCTCATGTTGTTTTATGGAACCTTTTTTTGGTTTGATCAAATGGTTGGAGAATAACATTCTTCAATTACAGGATGAAGCCGATGAGATGTTGGGCAGAGGCTTTAAGGATCAGATATATGATGTCTACAGATATCTACCCCCAGAGCTCCAGGTCAATCACAGATTAAAACTGTACTAGACTGATAGTTTGTCTTGTGTTTCAATGTTCACCCCTCAGTGAATTGATTCTTTTAAATTTAGCTCCTCACTAGTCTATAACATCTAACATCTACTCCCTCGTCCCAAAATATAGCTACCTTTAGCATTAAAATTTTGTCCCAAAATATAGCTACCTTTCCTACTACCTTGTCTCAACCAATCACAATCATCTTCCACTTAATTTCTTCACCTACTTCCCTGTCTCAACCTATCACAACCATCCTTCCAACCATCCTTCATTTTATTTTAGACTTCTCCATAATACCCGCGCCTGACTCTAAAAGTCCTTATTTTGGGACAGAGGGAGCATTTAATATCTTGACCTACTTCCCTGTCTAAACCAATCACAACCATCCCTCATTTTATTTTAGACTTCTCCTTAATACTCATGCCTAACTATAAAAGTCCTCATATTTTGGGATAGGGAGAGCATTCTCCATCTCTATTGCAGTTTGTGTTACACTATTCTGTCCATGTTTTGATGGTTTCTTGTAACGTGTCATCATACGAACAGACTAAGCTGCCTTGTATCTGTTTGGATTCTGTAATGCATGACTTGTTTTCTGATGGCATAGTGCTTGAACTTGATGTCAATAACTGATGGCATATCCTGGGTAGTCATATCCCAATACTAATCTACCAGCACATCTTTTTCATTTTTACAGGTTTGCTTGATCTCCGCAACTCTGCCACATGAGATCTTGGAAATGACCAGCAAGTTCATGACTGACCCAGTCCGGATCCTTGTAAAGCGTGATGAATTGACCCTAGAGGTAAAACATCATTACTTGTTTTGCTTATCAAACAAACTTGATGATCTTCATTATGTATTTTACTTTGTTGGTTTTAATATGTTCATTTTTTCATATCATGTTTATAGGGCATCAAACAATTCTTTGTTGCTGTTGAGAAAGAAGAATGGAAGTTTGATACTCTTTGTGATCTTTATGATACACTGACAATCACCCAAGCTGTCATTTTCTGCAACACGAAGAGAAAGGTAATATATGGTGCTCTTTTTTTTTTTTTTGATCCTTTCAGTGTTGTTTGTCTACACCAAATTGTTGTGCTATCTTATGGTCATAGCTCCTTTGTAGTTCTTTCAAACACCTTTTGTTTTTTGCCATCTGGGCAGTTGCTATTACAGCATGTCTCTTGAAACTTTACTTGTTTGTACAATCCTGCACGAGTTGATACTTTTAGTTTGCTATGTTTCACTGTTATCAAGTCGCTCGACTAGTCGTGATTAGCCGTAGATTTGTCATAAAGTTGGTCAAGCTAGTCGACTAGACTAGAGAACCATGGCTCCACCAAATAGCAAGTTGTGCGATTAGTTGTTGTTAGTTGTAGATTAGTTGTAAAGGCGGTCATAGATTATTCGTGATGAGTCGTAGCAAATCAGCAATTCACCATGCTAATTGGCTTATTATATTTAGTACTTTAGTTTTATTATTTCTTGTTGACTTTGTCTTATTACTTGCTACTCCATAGTCCATAGTTTATACTATATACGTTGCTTAGTACAGTATAATGGTAGTAATTGCACCCTGTTTTTGCATGACCAAGTTGTGGACTGGTCGACCAAGTTGACAAGTCGGTCCAGGGGTACCTCGACTCAACTTTACGACTTAACAATCATGCTATTTTTTTTAACTATTTTGAATTGCACTGTGTTCCAACCATGCCCACTTGTTGTTATTGATGTTTTTTTTTTATATCCTTGGTTTCCTTTGGTCAGGTTGATTGGCTTACAGAAAGAATGCGCAGCAATAACTTCACGGTATCAGCTATGCATGGTGACATGCCTCAAAAGGAAAGGGATGCCATTATGGGTGAATTCAGGTCTGGTGCAACCCGTGTTCTAATTACGACAGATGTGTGGGCTCGAGGCCTGGATGTTCAGCAGGCAAGATTGTTGTGATTTTTGTTTGAAGACTATTGATTTTACTGCGCGTGGAGTATTGATTATTATTTTCATTTTCAGGTCTCTCTTGTCATAAACTATGATCTTCCAAATAATCGTGAACTTTACATCCATCGCATTGGTCGCTCTGGACGTTTTGGTCGCAAGGTAATGCTACACCTACACAACACAATCAAATGGGATCAAATGCTTGGACGCATGCTACACTTTCTACTGATACATTTGTACTAATACATATGTACCATGGTTTTGCTCAACACAATCACACATTCACCGATAATGATCATCAATAATAATCCATCAAATGCTTTGACATTTTTTTGTTGTCAGTATATGACAAATTAGAACACAGGAATTCTGACTTCACACTGTTGACACAAACACAATGTGTGGTTAACAAATTGCTGGCCATGATTTAGGTAAAACTTGTTAAAGTTTCTGTATACAACATGCGGGTTAATGGATATGTTTTTGTGGCAAGCCAAACACTAGGCTAAGTTGGTAAACCTCCTTGCCAAAGATGTGGCTAAGTGTGGCTACCAACCAAACACCCAACAGTTCATCACATTATCTTTAGATTCTAGAAATGATTAAACAATATTTACTCTCTGAATTCCAATTTTTTTTGGAAGTTTAGGAAAGATGATTTCAATACATCTCCATGCATCCAGCCATAAGAAATGATTATTATCACGAGCTAGCTGACTGCATACTATATAGGTAACAGTTTGATTGGGCAGATTCTAATGACTAAATAATCATTTCATATTGTAGGGTGTGGCCATCAATTTTGTCAAAAAGGAAGACATCCGTATCCTGAGAGATATTGAGCAGTACTACAGCACACAGATTGATGAAATGCCAATGAATGTTGCTGATCTAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010416