Os12g0260500

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Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0260500| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001073051.2 GI:297612963 GeneID:4351918| Length = 1299 bp...")
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Gene Name

Os12g0260500

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001073051.2 GI:297612963 GeneID:4351918

Length

1299 bp

Definition

Oryza sativa Japonica Group Os12g0260500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9123200..9124498

Sequence Coding Region

9123329..9124130,9124226..9124315,9124396..9124421

Expression

GEO Profiles:Os12g0260500

Genome Context

<gbrowseImage1> name=NC_008405:9123200..9124498 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:9123200..9124498 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcagagtaacacaacttctcagagagactaccaagagagttattggaacaaaaacaacttcccgtgcagatttaacactaagttgcttctccacggtgtccaatttacagaggttggctggtaaggtggctgtcatcaccggcgcggcgagcggcatcggcaaggcgacggcagcggagttcatcaagaatggcgccaaggtcatcctcgccgacatccaggacgacctcgcccgctcggtggcctccgagctcggcccggacgccgcgtacacgcgctgcgacgtcgccgacgaggcgcaggtcgccgcggccgtggacctcgccgtgaggctgcacggccgcctcgacgtgttccacagcaacgccggcatcccggggaggataccgcaggacgacgcgctgtccgtcgacctcgccggcttcgaccgcgtgatggcggtgaacgcccgcccggcgctcgcggccatcaagcacgccgcgcgcgtaatggcgcctcgccgcaccggctgcgtcatctgcacggcgagcggcgcgggcgtcgtccccatgccggcgctcgccatgtactccgtctccaaggccaccgtcatcgctgtggtgcgcgccatggcggagccgctggcgcgccacggcctgcgggtgaacgccatctcgccgggggcgacgaggacgccgatgatgctgaacgagatcccgcgcctcgccgtggtgtccccgggcctgagcggggagctgaggaggatggtggaggagggcgccagcgacgccgtcaaggtgctcgagccggaggatatcgcgagggcggcggtgtacctggcctccgacgaggccaggtacgtgaacgggcacaacatcgtcgtcgacgccggctactcggtgcacaaaggagcggagaactcgccggcgcgttga</cdnaseq>

Protein Sequence

<aaseq>MFRVTQLLRETTKRVIGTKTTSRADLTLSCFSTVSNLQRLAGKV AVITGAASGIGKATAAEFIKNGAKVILADIQDDLARSVASELGPDAAYTRCDVADEAQ VAAAVDLAVRLHGRLDVFHSNAGIPGRIPQDDALSVDLAGFDRVMAVNARPALAAIKH AARVMAPRRTGCVICTASGAGVVPMPALAMYSVSKATVIAVVRAMAEPLARHGLRVNA ISPGATRTPMMLNEIPRLAVVSPGLSGELRRMVEEGASDAVKVLEPEDIARAAVYLAS DEARYVNGHNIVVDAGYSVHKGAENSPAR</aaseq>

Gene Sequence

<dnaseqindica>369..1170#184..273#78..103#gagccaacaacgacgaccagctctagctcgttgtagcaatatctcgttgtagccatttattttttttttccagcaggatgttcagagtaacacaacttctcaggtattgtatacaatatagccgaattatacacactatagctgaaactggaaagattttgttgtgatccggttgtgttgcagagagactaccaagagagttattggaacaaaaacaacttcccgtgcagatttaacactaagttgcttctccacggtgtccaatttacagaggttaatttcatctgccttccattttagttcttggatgatctcctgtttcaatcatatgtacgttgtttcgtgatgagattgagatgtatgcacaggttggctggtaaggtggctgtcatcaccggcgcggcgagcggcatcggcaaggcgacggcagcggagttcatcaagaatggcgccaaggtcatcctcgccgacatccaggacgacctcgcccgctcggtggcctccgagctcggcccggacgccgcgtacacgcgctgcgacgtcgccgacgaggcgcaggtcgccgcggccgtggacctcgccgtgaggctgcacggccgcctcgacgtgttccacagcaacgccggcatcccggggaggataccgcaggacgacgcgctgtccgtcgacctcgccggcttcgaccgcgtgatggcggtgaacgcccgcccggcgctcgcggccatcaagcacgccgcgcgcgtaatggcgcctcgccgcaccggctgcgtcatctgcacggcgagcggcgcgggcgtcgtccccatgccggcgctcgccatgtactccgtctccaaggccaccgtcatcgctgtggtgcgcgccatggcggagccgctggcgcgccacggcctgcgggtgaacgccatctcgccgggggcgacgaggacgccgatgatgctgaacgagatcccgcgcctcgccgtggtgtccccgggcctgagcggggagctgaggaggatggtggaggagggcgccagcgacgccgtcaaggtgctcgagccggaggatatcgcgagggcggcggtgtacctggcctccgacgaggccaggtacgtgaacgggcacaacatcgtcgtcgacgccggctactcggtgcacaaaggagcggagaactcgccggcgcgttgaacatggctagtagctggtgccatgcatgtatgcatgcatgtgcctttgtcagcgccgtaataattctgttattgacgttcttgaaataaagatgatgtggctgtgcagtgacgcgacaacagttgaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0260500, RefSeq:Os12g0260500