BGIOSGA010440

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Revision as of 09:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010440, complete gene.| tag = OsI_122...")
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Gene Name

BGIOSGA010440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010440, complete gene.

LocusTag

OsI_12245

Ensembl Transcript ID

BGIOSGA010440-TA

Ensembl Protein ID

BGIOSGA010440-PA

Length

2590

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22363046..22365635

Sequence Coding Region

22364670..22365635,22363351..22364352,22363205..22363282,22363046..22363123

Genome Context

<gbrowseImage1> name=IndicaChromosome03:22363046..22365635 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:22363046..22365635 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACTAGCCAAGCCCCTCCTTCAGTTGCTGCCAACCCTGAATGCAACATTGATGAAGAGGACAATATTATGGAGGACCCAGATTTTGTAGACAGTGATTACGAAGTTGACAGGGATGATGATGACTTGTATGATAAATATATAGATGGTACTGTTCATGATGAGTTAGCTCTTGTCAAGGGCAAGGCTGTGGTTAAGGAAGGCGTGGGTAATATTCAGGATGCGTCCGATGATATTTTCTATAGTGATGAAAGACTATTTCTTCCCGAGTCTTCTGAAGATGAAGGTGAAATCAAGCTTAACTTCAAGACATTTAGACCTGATGTCGATATGCAATCACCAGAATTCTATCCAGGTATGGTGTTTGGCACTATTGAGGAACTTAGGAAAGCGGTATCCCAGTATAGCATTACAAACAGGGTTGCCGTGAAGCCTAATAGGAATAACAAGAAGAGATATGAAGCTCATTGTGCTGAGAACTGTCCATGGAAGTTAGTAGCAAGCGTTGATAGTAGAGCAAATTGTTTCATGGTTAAGCAATATGTGGGAAGTCACACTTGTAGGAAGGAGTGGGAGTTGAAGGCTGTGACTGCAAGATATCTCGCAGGAAGGTTTATTGAGGAATTCAGGGGTGATGACAAGATGACACTAGCTAGTTTTGCTAAGAAGGTACAGAAAAACATTACACCATCAAGGCATAAATTAGGAAGAGCTAGACAAATAGCAAGGGAAGCTATTTACGGAGATGAGATTGCTCAATACGACCAACTTTGGGACTATGCTCAAGAGTTGAGAAGGTCAAATCCTGGTAGCAAATTCTTTTCGAACCTTCATAATGGCTGCTTTCACACACTATATGTCTCAATGGATGCTTCTAAGAGGGGATTTCTTAGTGGATGCAGACCTCTCATATGTTTTGATGGATGCCATATCAAAACAAAGTTTGGTGGACATATTCTCACAGCATGCTACAAAGGTGAGGCACTAAAGAATCAATTATGGGCCATAGCGAGGTCAACCACTGTACCTGAGTGGAACGTTAACACTGAGAAAATGAAGGCAGTAAACAAAGATGCATATGGCTACTTGGAGGAGATCCCTCCCAACCAATGGTGTAGAGCTTTTTTCAGGGACTTCTCAAAATGTGATATTTTGTTGAATAATAATTTGGAGGTTTTTAACAAGTGCTTGTTATTTATGCCCTTTAGTTTTCATATAAGATATTATCATCATTTATCTAAAATTATTCAGTGCCATGTTAGGTACATACTTGAGGCTAGGGAGTTGACCATTTTGTCTATGTTGGAGAAGATCAGGAGCAAACTCATGAATCGAATATACACAAAGCAGGAGGAATGTAAGAAGTGGGTCTTTGACATTTGCCCAAAGATAAAGCAAAAGGTAGAGAAAAACATTGAGATGTCCAACACATGCTATGCATTGCCTTCTAGGATGGGGATCTTTCAACTCACTGATAGAGATAAGCAATTTGTTGTGGACATAAAAAACAAACAATGTGACTGTAGGCGTTGGCAATTAATTGGGATTCCATGCAACCATGCAATTTCTTGTTTGAGGCATGAGAGAATCAAGCCAGAGGATGAGGTATCATTCTGCTACACAATTCAGTCCTTCAAGCAAGCATATATGTTCAATATAATGCCAGTGCGAGATAAGACACATTGGGAAAAGATGAATGGTGTCCCAGTTAATCCTCCAGTTTATGAGAAGAAAGTTGGTAGGCCTAAGACAACAAGGAGAAAACAACCACAAGAACTTGATGCAGGCACAAAGATTTCCAAGCATGGTGTACAAATCCATTGTTGCTATTGCAAGAATGTTGGACACAATAAGAAAGGTTGTAAGAAGAGAAAGGCTGCCCAAAATGGTAAAAATGAAATAGAAAATATTATTAGCAAAGAACCCACACCAGAAGTTGAAGAGGTTGATGAACCTATCATCACTCAGGTTTTGACTGATCCTATATGCTTCCTTGGCACAAGCACTCAAAGGAGCTCTTCTGTAATTGATGCACTTATGACAGAGGGCATCAGTCAACAAGCTAGGACATTTCCTGGAACATTGCCTGAGTCATCTTTCATTGCCACCAATAGGAGTGAATGA</cdnaseq>

Protein Sequence

<aaseq>MTSQAPPSVAANPECNIDEEDNIMEDPDFVDSDYEVDRDDDDLYDKYIDGTVHDELALVKGKAVVKEGVGNIQDASDDIFYSDERLFLPESSEDEGEIKLNFKTFRPDVDMQSPEFYPGMVFGTIEELRKAVSQYSITNRVAVKPNRNNKKRYEAHCAENCPWKLVASVDSRANCFMVKQYVGSHTCRKEWELKAVTARYLAGRFIEEFRGDDKMTLASFAKKVQKNITPSRHKLGRARQIAREAIYGDEIAQYDQLWDYAQELRRSNPGSKFFSNLHNGCFHTLYVSMDASKRGFLSGCRPLICFDGCHIKTKFGGHILTACYKGEALKNQLWAIARSTTVPEWNVNTEKMKAVNKDAYGYLEEIPPNQWCRAFFRDFSKCDILLNNNLEVFNKCLLFMPFSFHIRYYHHLSKIIQCHVRYILEARELTILSMLEKIRSKLMNRIYTKQEECKKWVFDICPKIKQKVEKNIEMSNTCYALPSRMGIFQLTDRDKQFVVDIKNKQCDCRRWQLIGIPCNHAISCLRHERIKPEDEVSFCYTIQSFKQAYMFNIMPVRDKTHWEKMNGVPVNPPVYEKKVGRPKTTRRKQPQELDAGTKISKHGVQIHCCYCKNVGHNKKGCKKRKAAQNGKNEIENIISKEPTPEVEEVDEPIITQVLTDPICFLGTSTQRSSSVIDALMTEGISQQARTFPGTLPESSFIATNRSE</aaseq>

Gene Sequence

<dnaseqindica>1..966#1284..2285#2354..2431#2513..2590#ATGACTAGCCAAGCCCCTCCTTCAGTTGCTGCCAACCCTGAATGCAACATTGATGAAGAGGACAATATTATGGAGGACCCAGATTTTGTAGACAGTGATTACGAAGTTGACAGGGATGATGATGACTTGTATGATAAATATATAGATGGTACTGTTCATGATGAGTTAGCTCTTGTCAAGGGCAAGGCTGTGGTTAAGGAAGGCGTGGGTAATATTCAGGATGCGTCCGATGATATTTTCTATAGTGATGAAAGACTATTTCTTCCCGAGTCTTCTGAAGATGAAGGTGAAATCAAGCTTAACTTCAAGACATTTAGACCTGATGTCGATATGCAATCACCAGAATTCTATCCAGGTATGGTGTTTGGCACTATTGAGGAACTTAGGAAAGCGGTATCCCAGTATAGCATTACAAACAGGGTTGCCGTGAAGCCTAATAGGAATAACAAGAAGAGATATGAAGCTCATTGTGCTGAGAACTGTCCATGGAAGTTAGTAGCAAGCGTTGATAGTAGAGCAAATTGTTTCATGGTTAAGCAATATGTGGGAAGTCACACTTGTAGGAAGGAGTGGGAGTTGAAGGCTGTGACTGCAAGATATCTCGCAGGAAGGTTTATTGAGGAATTCAGGGGTGATGACAAGATGACACTAGCTAGTTTTGCTAAGAAGGTACAGAAAAACATTACACCATCAAGGCATAAATTAGGAAGAGCTAGACAAATAGCAAGGGAAGCTATTTACGGAGATGAGATTGCTCAATACGACCAACTTTGGGACTATGCTCAAGAGTTGAGAAGGTCAAATCCTGGTAGCAAATTCTTTTCGAACCTTCATAATGGCTGCTTTCACACACTATATGTCTCAATGGATGCTTCTAAGAGGGGATTTCTTAGTGGATGCAGACCTCTCATATGTTTTGATGGATGCCATATCAAAACAAAGTTTGGTGGACATATTCTCACAGCAGTGGGCATGGACCCTAATGATTGTATCTACCCTATAGCTATTGCAGTTGTTGAGGAAGAAAACAGAAAAAGTTGGGGGTGGTTTCTAAGTACTCTCAAAGAAGACCTTGCTATTATGAATACATCTCCATAGACAGTAATGACTGATAGGCAAAAGGTAGTTGCCTGTTTTACATTCTGTATGTATTAATTTGCATTTCACATATTTTAATGATGGTGTTTGCATGTAAATGGAGGGGCTTATTCCAGCAATCAAGGATGAGTTCCCTGATAGTGAGAATAGGTTTTGTGTTAGACATCTTTACCAAAATTTTGCAGTGCTACAAAGGTGAGGCACTAAAGAATCAATTATGGGCCATAGCGAGGTCAACCACTGTACCTGAGTGGAACGTTAACACTGAGAAAATGAAGGCAGTAAACAAAGATGCATATGGCTACTTGGAGGAGATCCCTCCCAACCAATGGTGTAGAGCTTTTTTCAGGGACTTCTCAAAATGTGATATTTTGTTGAATAATAATTTGGAGGTTTTTAACAAGTGCTTGTTATTTATGCCCTTTAGTTTTCATATAAGATATTATCATCATTTATCTAAAATTATTCAGTGCCATGTTAGGTACATACTTGAGGCTAGGGAGTTGACCATTTTGTCTATGTTGGAGAAGATCAGGAGCAAACTCATGAATCGAATATACACAAAGCAGGAGGAATGTAAGAAGTGGGTCTTTGACATTTGCCCAAAGATAAAGCAAAAGGTAGAGAAAAACATTGAGATGTCCAACACATGCTATGCATTGCCTTCTAGGATGGGGATCTTTCAACTCACTGATAGAGATAAGCAATTTGTTGTGGACATAAAAAACAAACAATGTGACTGTAGGCGTTGGCAATTAATTGGGATTCCATGCAACCATGCAATTTCTTGTTTGAGGCATGAGAGAATCAAGCCAGAGGATGAGGTATCATTCTGCTACACAATTCAGTCCTTCAAGCAAGCATATATGTTCAATATAATGCCAGTGCGAGATAAGACACATTGGGAAAAGATGAATGGTGTCCCAGTTAATCCTCCAGTTTATGAGAAGAAAGTTGGTAGGCCTAAGACAACAAGGAGAAAACAACCACAAGAACTTGATGCAGGCACAAAGATTTCCAAGCATGGTGTACAAATCCATTGTTGCTATTGCAAGAATGTTGGACACAATAAGAAAGGTTGTAAGAAGAGAAAGGCTGCCCAAAATGGTAAAAATGAAATAGAAAATATTATTAGCAAAGAACCCACACCAGAAGTTGAAGAGGTTGATGAACCTATCATCACTCAGGTACTAGAGATTATCATTTTACATTAAACATGTAACAGAACAATTAACTTGTGCAAATGATACTGCAGGTTTTGACTGATCCTATATGCTTCCTTGGCACAAGCACTCAAAGGAGCTCTTCTGTAATTGATGCACTTATGACAGAGGTAAGTCATTATCACTTGTGATGTAAACAATTCTTACCAAACCTAACTTGTGTATACTCTTTATTTATTTATCTACAACAGGGCATCAGTCAACAAGCTAGGACATTTCCTGGAACATTGCCTGAGTCATCTTTCATTGCCACCAATAGGAGTGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010440