BGIOSGA010448

From RiceWiki
Revision as of 09:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010448| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010448, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010448

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010448, complete gene.

LocusTag

OSJNBA0037J17.7

Ensembl Transcript ID

BGIOSGA010448-TA

Ensembl Protein ID

BGIOSGA010448-PA

Length

3730

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21862753..21866482

Sequence Coding Region

21865782..21866482,21862753..21863002

Genome Context

<gbrowseImage1> name=IndicaChromosome03:21862753..21866482 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:21862753..21866482 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCTGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCAGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MAVAATSPTIATAPFSSLPLCLRLRPKPLLFTSRLLLPVPKSSSWVESVSEEGEEEGVEEDSEESGAAGEDDDGEDNDEKPRPEPVAASGFEFASPPEGYVEPAPFDELPPESPEDVAAAYEALYGPAFSGETVMGNNVFEVKVVDPVDMDREQRPSDEFSERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNLVTVPLTKYSTFPHRADADYGAARVMLRPACPGSGVIAGGAVRVVLEMAGVENALGKQLRSKNPLNNARATIKATQMMRQFKDVAAERGLPMEQLWK</aaseq>

Gene Sequence

<dnaseqindica>1..701#3481..3730#ATGGCGGTGGCCGCCACCTCCCCTACCATTGCCACTGCGCCATTCTCGTCTCTTCCTCTCTGCCTTCGCCTCCGCCCCAAACCCCTCCTCTTCACTTCTCGCCTCCTCCTCCCCGTCCCCAAGTCCTCCTCCTGGGTTGAATCCGTCTCGGAGGAAGGGGAGGAAGAAGGCGTGGAGGAGGATTCCGAGGAATCCGGTGCAGCGGGGGAAGACGATGACGGGGAGGACAACGACGAAAAGCCGCGGCCTGAGCCGGTGGCCGCCTCTGGGTTCGAGTTCGCGTCGCCGCCGGAGGGCTACGTGGAGCCGGCCCCGTTCGACGAGCTGCCCCCGGAGTCGCCCGAGGACGTGGCAGCGGCGTACGAAGCGCTCTACGGGCCGGCCTTTAGCGGCGAGACGGTCATGGGCAACAACGTCTTCGAGGTCAAGGTGGTGGATCCCGTCGACATGGACCGGGAGCAGCGCCCTAGCGACGAGTTCAGCGAGCGGGTCGTGCAGGTCAATCGCGTCACCAAGGTCGTCAAGGGCGGGAGGCAGTTATCCTTCCGTGCGATCGTCGTCGTCGGCGACATGAAGGGCCACGTCGGTGTGGGCGTTGGCAAGGCCAAGGAGGTCACCGAGGCCATCACCAAGGCCGCCATGAACGGCCGTCGCAATCTCGTCACCGTGCCGCTCACCAAGTATTCGACCTTCCCGCATAGGTAGGTGACATCCCTTGCTTTATTCCTAATTTTGCATACGAGGTTATCATGTGGATGCTCTTATACCCATCGACCCACTAGTTTCAACTTAATGTGCAAACAGCCGGCCGACTAGTACTAATTAATACTACAAGAAATGAGTTCCATGGAAACTAAAACATAAGATACTGTAAGGATCGTGATTTGTTAATGATATTGTTTATTAGTTGTTACTACTAGTTTTTGTGGTTTTAGCCAGCACAGCAATTTGTAACCTGATTTGCTATTATGCCCAAATGGTGTATTCTTATTTTCTGTTTTACACAGAGGCACTGATAATTTGCACAACAGTTCATGGTTGATAGTGAAATTGGTAGTATGCATCTTCCCTCGTGCAGGCATTGCACTCCTATGAACAAATATTTTGTAGAAGATATCAAAATCGAAAGTACAAAAGATTCAGATTTAATCTTGTGCCACACTGTCACCTACTCCCTCCATCCAAAAAAAACTCAACCTAGGTGTGGATGTGACCCCTCCAGATTCGTTGTACTAGGAGGGGTCACATCCAATTCTAGGTTGAGTACTTGAGTTTTTTTGGGACGGAGTACTTATCTGCATTTTCATGGATATATGTATTTTGAATGCTCCTCCTGTTTGCATGAGCTAATGTGCAATTATATTTTTCATCAAAATGTACCTGGATTATCATAAATTGTGGTGTCGTGGTAGATACCTGACATTGATGGAGTGATTCTTGACAAAGGCATTTGTAGCTCGTAGTAAGTGTGATCGAGAACACATTTTCAACTGCAAGGGTTGTTTTATTTAAATTATGTTAATTGTACTAAAATTCAATTCGGACTTTAAAGAATAAAGTGTTGTTAAAACTCAGGTGCATACTAGCGACTCTGGTTTTTGAACATTGATACGATTGAATTTTTAGCGAAGTGCTACAATTGAATCTGGACTGATGTGTTCTATTCTCATGCTGATTGTATGGTTACGTAGTTGTCTGAAAGCTAGTTGATAATCATAAAACACCACTCTTTAGTCTAGGATTTGCCTCTATCTGAAAGCTAATTGATAAAGTGCTACTCTTTAATTGGTCTAAAATGTACCATTTTGGACTAAATTCATTTGACCTTTCATCCTTTTCTTTATTGACCTGAGCTCAACTTGTTCTTCCTGTTTTTACTTCTTCCTCGCCTCTTCCTATGCCCAGTAAAAGCTGTAAAGTCTGAGTTAACAGAGGCATAATTCCCAACTAAATAACCAAGACTTCAGGTATGCTTTTACAATCATTATGGAAGGCAAGCAGTGACAAACCGGAGAGCACAGGATCTATTTTTACTAGCTACTCCTTCCGTCCTAAAATATGGCAACTTATAGGGTTCAAATTTTGTCCCAAAATATAGCAACTTCTAGCTTCTAAAGTGCAGCTTTCATTATGTAGTACCCAAAAATACCGATGTACCCACCACTGCCTCTGCGTCGTTTTCTTACCAAAGCCCAGGACATATTAATGGAGGGTTAATATGGAGGCTATACTCTTTTTATCCCTCTCCTTAATACCTGTGCCCAACTCTGAAAGTCATTATATTTGGATGGAGGGAATATTTCTTTTGCTGAAGAAGACAGGAACATCTCTGAGAGAGTGTTTAAGTCTAGGGACATACTAGAGCTGGATAACTGAGTATATGGAACCAGTAAACCCACTAGTGGTGTTTTGCATCAGGAAGGCATGGACCTTGGGAACAAGGATCAGTGGCAAATCCATGGGGCAAAAGGAGGTCTGGCCTCTCCCAGCATGTTGCTTCCCCAGCCTGGCCTGGCGAAACCATTAGATCTCTAAAGCTCTAATGCAACCCGCGGGATATTTACCAATTATTTTCGTAATCATTGTCACTCGGCAAGTCGACCCCCCTCATATCTAAATCCTGGCTTCTCCACTGACAGGGATGCCAAGCTCCTTGTCAGTGGCAGTGCAGAGTGGATTGGATTTGAGGAGAGCATGCAGAGGGGATTAGATTGTGCATGGAGGTGAATATGGAAATGAAAATTCGAAGTTTGACACAGCCTTGAGGTCTCTTCTTCCTCTCTCCTACCATTTGTATTTGGTATGACTGTTTTGCAGAAGGAAGAATAGAAAAATAGGAAATGCAAGTGATATTCAGGTTAAGAAGTTGAAAGAATGGAAAGGGAAATTCAATTTAGTCCAATGTGGCACTTCTTAGACCAAACCAATCAAGGAGTTGCATTTTTTCAATTAGCTTTTGGGATTGGCAAATCCTAGAGTCCCCATCTAAAGCATATGATCAGTTATCCCAGTTCTATTATGGTGTTTTGTTTTGTGCTATGAGATGTCTAATTTTGTTACTGACATTAGGCAGATGACAAACCGCTGATGTGGCCTGTACTTTTTGGATATGGCAAGACCTTTTTAAAAATATCAGAACTTTAGTTTTGTATGTTGTATCCTTTTGTTTGGAAAATAACTCTTCCCAATCTATTTCTTCCTGCATTTGGCTAATAAACATGTGATGGCTTAAAAGCTTGGCCGTACATTTAATTGTTCTGATCTTTGAAGATTAATAAAAAAAATTCTTTGGCGGAGCAATTTTATAGGTGTTCTTCCTGTGATGGTATCAATAATTGGAATTTCTAACACTCAAATCTTGTGCATATGAGCATATCGACAATAATTGTGCATCTCCTATCTTTCTGGCAGTTATGTCTATCTACAATAATTGCAATTCTGAGTATTATTTCATCTTGGTTTGTCCTGCACAACAAGCAGAGCAGATGCAGACTATGGAGCAGCCAGGGTCATGTTGAGGCCTGCTTGCCCTGGATCTGGTGTAATTGCAGGTGGAGCTGTGAGGGTCGTGCTGGAGATGGCTGGGGTTGAAAATGCTCTGGGGAAACAGCTGAGGAGCAAGAACCCCCTCAACAATGCAAGAGCTACCATCAAGGCGACCCAAATGATGAGGCAGTTCAAGGATGTTGCTGCAGAGCGCGGGCTTCCAATGGAGCAGCTATGGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010448