BGIOSGA010449

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Revision as of 09:16, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010449| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010449, complete gene.| tag = OsI_122...")
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Gene Name

BGIOSGA010449

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010449, complete gene.

LocusTag

OsI_12224

Ensembl Transcript ID

BGIOSGA010449-TA

Ensembl Protein ID

BGIOSGA010449-PA

Length

6608

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21717632..21724239

Sequence Coding Region

21724237..21724239,21721204..21721261,21720965..21721080,21720775..21720885,21720565..21720677
,21720175..21720481,21720010..21720093,21719713..21719784,21717939..21718007
,21717632..21717664

Genome Context

<gbrowseImage1> name=IndicaChromosome03:21717632..21724239 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:21717632..21724239 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTATGCCACACTTTTGAGCCAATTTATCAATTCAATAAAAAAAGGATCCATAAAGGAGGCTTACTGGCCATTACACTTGGTGCTGGAAGTAGTTCTCATGAAATAATGGATGAATCCCGTCTGCAGCTTCTGAGAGTCCTCCAAACTTGGCCTGATGCTTCAAAAATGATATCTGCACTTGATTGCTTAGCTGTTGTCACATTTGTTGGTGCAACTGATCTATCTGAAACCCAGCTATCTATGAAAGCCATCTGGGATGTGATTCACCCTAAGTCAGGATCCAATGTTGGAATTGTCAGAAAACCAAAGCCTCCCTTGTTAGCAGCTGCTGTGTCTGCATGGGCACTTCTTTTGACAACTATTGTTTCATCAAAAAGAAACTTTGACTCTTGGAAAGAGTCAATTACATTTCTTTCTGCTCTTCTAGAAGCGGAGGACCGTGCTGTGCGGATGGCTGCTGGTGAAGCATTAGCACTGTGCTTCGAGTTAAAACTGCTTGATGTTTTCTCCAATGAAGAAGTTGAGGTGGACACTGCAGAAGCTAGTGGTTCTAAGAACCAACTTTTCTTGAATATGCAAGCATTGAAGGCCAAAATATCTGGTCTAGTCTATAATCTCTCTATGGAAGCGGGGGGAAGAGGTGCTGACAAGAAAAATCTGAATGATCAAAGAGACTTATTCCAACGAATCTCAGATTTTATTAAGACTGGTGAGTGCCTTGAAGAATCACTTAGAATTGCAGGCAAGCATGGTATTTTAAGAGTTACATCATGGCGTGAATCAATACAGGACAATGGATTGCTACATGATATCTTTGACATCAAAATGGATAAAACTGAAAACATGTCAACCACTGAAAAGAAAATCTATAGGTCTGGAGAAGAGAAAGGAAGAGCTCTAAAGTTGAATAAGGAGCGTCGTTTAGCCCAAATGAGGAAGCAAAATATCTTAAACGAGCAATAA</cdnaseq>

Protein Sequence

<aaseq>MVCHTFEPIYQFNKKRIHKGGLLAITLGAGSSSHEIMDESRLQLLRVLQTWPDASKMISALDCLAVVTFVGATDLSETQLSMKAIWDVIHPKSGSNVGIVRKPKPPLLAAAVSAWALLLTTIVSSKRNFDSWKESITFLSALLEAEDRAVRMAAGEALALCFELKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGADKKNLNDQRDLFQRISDFIKTGECLEESLRIAGKHGILRVTSWRESIQDNGLLHDIFDIKMDKTENMSTTEKKIYRSGEEKGRALKLNKERRLAQMRKQNILNEQ</aaseq>

Gene Sequence

<dnaseqindica>1..3#2979..3036#3160..3275#3355..3465#3563..3675#3759..4065#4147..4230#4456..4527#6233..6301#6576..6608#ATGGTGCGCCTCCATCGATGTGTTCCGTCGCTACTATGGGCCCTGAGCTCTGCCGCCGCCACTGTCGAGGTCTGCCACTATTGGCCTTGAGCTTCATCGTCGCCTATCTCGTCTCGCCACCGGGAGAGAGGGAGAAGAGAGATGGAAGGGAAGGACACAAAAGTGATATTTCACATCGCTATAGTGGCAAAAGATTAGGAAGAACAGAAAGAGTCGCATTTGAAGAGCGTCCATCGGAGAGTGGCAAATAGTTAAAAATGCCCCTCTAGGCCTCTAGTTGGGAAGGAAAGGGAAGAAAAACGAGCGGATAAAGAAATCTAAGAAAAGAAAAGTCTTCTTCCTCTTCCTCCCCTCCTCCCGTCCCCATCGCCCAATTCACATGGCTCTGCGTCTCCACGGCCAATTCGATCCAACCCGCGAAGAGAGCCCCCGCTTCTCCCCATCCAATTCCGCCACCTGCTCGTTCTCCCAGTTCCTCCTCGCCGCCCCAGCTGACGACGGCCACCTCTGTTCGATCCACCGCTGACTGGTCCCCCCCGCTCCTGGTTTCGGGGGCGGTTCTTCGATTCTTGAGATCTTAGCTCCTTCTTCGACGGCCTCACCGCTGCCATGGGCAAGAGTTCGTATCATGTCATCCATTTCGTGGATTCCCCTTGCTGGTTCTTCGCTGCTCGGTGTCATTGGGAATTTTTTCCGTTGTTTCTTTAGGTAAGAAAAACAAGGGTGGTCGAGGAGGCGGCGGCGGTGGTGGAGAGGACCAATTTGACGGAGGTAGTGACGTGGATAGCGTGAGTTCGGTGTCGACGGCGCTGTCCGACCTCCAGCTCGCGCAGGCCACCGAGCAAGTTAGCTCGCAGGATTTTGTTCTTGACAAATACATCGACGATCTCTATGAGAAGAGGTGGATCATTCTCTTTTCCCTTAGCTGGATCAATGATGTCTGCTAGGAGCCTAGGAACTTATATTTTTCCGTTGTACGTTTTTTTATCAGCAGTTGAATATTTTGATAGACGGATAAGCTTTATGGAATATGTTTGATTTACATTAATGCTATGTACTTCGTGAAAGAAGCTATTCTATAACAACTGCAGTGCCGGCTGGCACCGGTCTTATACAGGATATCGCAATCGTCTCAAGCTGGGCATTGAATTCTGTTGTTATATTGCAATTTTACCTATGTTGCTCAAATTATCATTCACAATTGCTCTTTAAATGATGAATTGTGCATGGTTTCATCTAATAATTCCAATTAATTCTTGGCAGTTCATTTATGGTCTCGGAGATGCAACTAACAATCTAACAATTAGTCTATGTTGAACTGTCTCTATTTATTTGTAGAATTGGAGTAAATATTATTTACCAGCACATGGGTTTTTATCAATAGAGAGCATGTGCTATTGCTACCTCTACTGGTAAATTTGAGTTTCATAATGTGTTTTTCCATTAAAAATACTTGTGAATACATATGCTCTTGCACACTAGATTATCAAGTTATATTAACAATGCTTGAACCATTAAATCCTCTACTAATAATCTTTTTTCTGTATGTTAGTGAGATTATTAGTTTTAGTAAAGAATTCACATAGATTAATAGATAGTTCATATACACTAATGCAGCAAAGAATCCATCAATTCAAATTGCTCTTTGATTTCTTTGTTTATTAGTTTGATAAAGTAGATAGATTGTTTAATAATTGGAAAAAAAAAGGCAAGTTGTGAGTAGAGTTCAAAGAGTCATCAAATGTCATTCTTACATTTAGCCAATTTGTTGGGTGTCTGGTCATCACATAAAGGTACTAAAGTTTGAACAGAAGTACAACATTTCCAGTTTTCTGTTTTGTTAACCAACATTAAACGGTCACATTGTGTATCATATGAACATCTTGTTTAATTCTTCCCATTCTAGATCAACTCCATGAGATCCCTTTCCTTCAAAAAGATAAGAAGAGTCCTGCTGAGCCTTTATGCTCTTCAAAAAAGGAGATTTGGAGGGAGAGACGTCCCTCCAAACATTTTTAAGAGGAAATTGTGAGTGTGTTGGGGATTAAACACGAGACCTTGGGGTTGAAACCACATACCCCTTGCCACTGCACTATCAAGTGCATCAACCACACCCCTTTATGCTCTTCACACCACCATGTTCTTTCTTTGCGGTATTTATAAAATGAATGATGAAACAAGAACAGAATACTATTGAAAGAGTCAAGCTCTCCCAGAAAGTGAAAAGAATAAAGTACACACAAGTACTATAAATACTGCTTCCAGGTTGTGTACTTTTCAGTTTTTGCTTTTTGTAATAGTATAAAAGCACTACTATTTGTTTTATATTAACGCGCATATTAAATCAACTGCTGTGATTGGTCCAGGGGATCCACAAGAGAGGCAGCATTAGGCGCTCTTGTTGATGCTTTTGAAAGTTTTGTGCTACTTGATTTAGTGGAAAACAAGTAAGTTCATGGTTGTTAAATATTGTATGCAGCTATTGAACTGATGGGCATATGACTGTACTATTCATTCATGAGAATTTAGATTCAGCAATTTGCATAACCCAAATTTATTGTGTTCTAGTTTCAAGTATCTAGTGAGAAGTGAGATTACATGCAAGCTGATAAACTGTAGGTCCTATGGTTCAACCATACTAAGTCAAATATTACAGTAGCAAACTTCTGGATAAAGGCATTCCCTTTTATCTAGCAATTTACATCATACATAATGAGTTACTAGTGAACAGATTGGTATATGTCATTTCTATGTTCATTCATAGGATTGTACCTTCCTCCTTTCCATACTATTCAATATGTATAGTGAGCTTACGCATGCATTATTGCAAGCAGACAAGCATTCTTTCCATAGTTTAGCCACAGTTGGTCCAATCATAACTTTTTCTTCTATGGGAGTTGCAAGCATTTGAACAATGTCATGCCATCTTTTTTGTCAATCTATCCTGAAAGTTTACCTTTCTTTTTAATCTTTTGAAGGTATGCCACACTTTTGAGCCAATTTATCAATTCAATAAAAAAAGGATCCATAAAGGAGGTCTGTCTGGCTTGTCACACCACTGGTTAGTATCCTTCTCTGTCCATGGGTATTCGTAGTTTAGGCTGTGCAGCAGAATATCTGCTGTTCTGAACTTCTTTTGTTCTTTTTTAAACTTGCGAGGCTTACTGGCCATTACACTTGGTGCTGGAAGTAGTTCTCATGAAATAATGGATGAATCCCGTCTGCAGCTTCTGAGAGTCCTCCAAACTTGGCCTGATGCTTCAAAAATGATATCTGTATGTTTAGTTTGTTTTTTGTTCATCCAGCAACTGAATTTGGATTTTCAGGAGGCACCACTAACCTGAACTCTTGTAGGCACTTGATTGCTTAGCTGTTGTCACATTTGTTGGTGCAACTGATCTATCTGAAACCCAGCTATCTATGAAAGCCATCTGGGATGTGATTCACCCTAAGTCAGGATCCAATGTAAGGGTGAATAACTTGTGGTGATGGCTTGGTAATAATTGCAAAATGTTATATCTGTTGTCATCTGAACTTAAATCTTTTGCATGGATTTTTATAGGTTGGAATTGTCAGAAAACCAAAGCCTCCCTTGTTAGCAGCTGCTGTGTCTGCATGGGCACTTCTTTTGACAACTATTGTTTCATCAAAAAGAAACTTTGACTCTTGGAAAGAGTTAGTGAAGCTCAGTCTCCGTTTTCTTCTATGCACCAAACTATATGTCAAACTATGTCTTGATATTCTTCTTTTGGATGCAGGTCAATTACATTTCTTTCTGCTCTTCTAGAAGCGGAGGACCGTGCTGTGCGGATGGCTGCTGGTGAAGCATTAGCACTGTGCTTCGAGTTAAAACTGCTTGATGTTTTCTCCAATGAAGAAGTTGAGGTGGACACTGCAGAAGCTAGTGGTTCTAAGAACCAACTTTTCTTGAATATGCAAGCATTGAAGGCCAAAATATCTGGTCTAGTCTATAATCTCTCTATGGAAGCGGGGGGAAGAGGTGCTGACAAGAAAAATCTGAATGATCAAAGAGACTTATTCCAACGAATCTCAGATTTTATTAAGGTCTAACTTTATTGTATTCTTGTTGTATCATGAATGTTTTAATAGCTTTTTTTTCTGATCATCTAATTACCTTTTTTGCAGACTGGTGAGTGCCTTGAAGAATCACTTAGAATTGCAGGCAAGCATGGTATTTTAAGAGTTACATCATGGCGTGAATCAATACAGGTGTTTGTTTTATTTCAATGATTATCTGAACTTTTGTGCTTGCACATTTATAAATTTGCTAATTTGTGTATCTTTGGTTAGTTGAACTATTTGAGGCGGTTCCTTGGGCGAGGATTTCTGAAGCATGCACAAGTTAGTATCGGTGAAATTATGCATATTAATTTCTTTTCTATTACTTATATTTCTGCTTTATATTCAGACTGGCATTCATAATTTTTATGACAGGACAATGGATTGCTACATGATATCTTTGACATCAAAATGGATAAAACTGAAAACATGTCAACCACTGAAAAGGTAAGCTTTTCATAGCTTTGGACTTGCTTTGCATTCTGATTATGTTTTGTAGGGTGTTATTTAGAGTTTTGTTTGGTATGTCTGCTTGGCAATTTCCGGTGATATGTACTTTGATTTTCAGATACATTTTATACTTTTGGGTAGTGCTGCATCCAGGCTTCTCCGTGCAGTGTTGATTTATTTATAAGTTGCAGTGTTGCCCTCCTGGGGATAATCAATCACCAGTTTTATGGTACATATAGAATTGATTTGAATAGTCTATGCTCGCATATCAAGTTTTTATTAATTGATTAATTCGTTTCTTAACCTGTTACTGGCTTATATTTTAACTAGCAAAGTACCCATGCGTTGCGACGGATGAAGTCAATAATAATTGCATACATGGATGATTATAAGAAATATATTGATACTAACTTAAAAAAAATTATATTTTACATATTACTAATTAAGTTTGTAACCATAAGTTTATTGGTATTAATTAGGTCACGTAATATTATTTTTATTTATTAATTACTTCATTCCAAATTTTTAATGGCAAAATTTAAAACGTGCACATCTCTTTCCAATGAAAACATCAACTGCCAACACTAGCTTTATCGTAAATTATTTGTCATATGTAGCACACGATAATTATGCAGTTCACACTCATCATACCAATATAAGGACCCCCTTAATCTCTCCTCATTTAGTATGTACGTTCTCCCAATATCAACTTTGTGTATAGGACCGGAGGTGCTCGACGATGGAGGCAGCGAAAGCTGTTCTAGTGCATGGCGAGCGCAGCGCTGGCGACAGTGGGTTTAGCGTGGAGTTTATCCACCAAGATTTTGCCAGGTCGCCGCTCCATGATCCCGTGCTGACCACGAAAATCCACGTGCTCAGTGCCGTACGTGTGACCGTTCATGGCATGTGTCGGCGTGCTCGCAGGATCTTTTGAAGTGGTGGATGATGGTGTCATGTCGAAGGTCGTGACCTGGTGATTTGAGTACCTGATGGCACTCACCGCCTCACCGACACGTTCAATGATCGTCATCGCCAACACAGGCAGTGAGGTTGAACTGGTTATGTGCAAGTAGGGGAGCAACCACACCAAAAGAGCACCCGGTGACGGAGTGACTCCGGTGATACAGTTTGACTGGCCAGCATGTTTGTTCCCTGGAGATAGGCATAGGCTGGTTGGCCTCAGCGTGCGCGCTCAACTTTGGCATAGGGCATGACAATCCTCAGTGTACCGTGTTCGACGTTACGAGGCGATCTGGCGATGGGTGAAAAAGGGAAAAGGACAGAAAGCGCGATGTAATCTGGCGTGATCTCAACTCAGTGGTCCCGCGTGATCTTTGAGAACGAGCTAGCACATCTCAATCTCGATCTTTAACGGACGACCTACAAAAGGACTTGCGGGGAAATAGGAATCGAATAAAGGGCTTCCACTCTCGTGAAGCTGTTTTCTACTAGCGATGGATGAAATCTTTTTTCCAAAATACTTACGTACTCCGTATTTTTTAAGTAGGTATAGATTTGTATATAGTCTATCCATACATATTCAAGCTTTTCCTTATATGTTACTCCGTTCATTTCCTATCTGTTACTGTTCTATTTTTGGCATGCTTGTGTGATAGACATCTAGACATGGACATTTTTGTTTTGGGCATGGAACCTAGACGTGTTTTTTTTTAATCACAAGTGCGATCACCTGTTCTTGCAGAAAATCTATAGGTCTGGAGAAGAGAAAGGAAGAGCTCTAAAGTTGAATAAGGAGCGTCGTTTAGCCCAAGTAAGATAAACGTGCAATATTATCCATTTTGTTTTTGTTCACACTGGCAGAGTGCAAATCCACTTGATGTTATTCTTCAGCCTTATTAGTAGTTGTGGGATCTTCCAAATTTTTTAGGCTATATGTAGCAGTCGAAGCTCTTGATGAAAATCAAGTAGCATCTTTGATATAACTTACATTTCCTTGTTCAATATAGTTTGATGTTCCATTTCTAATTTGTTAATTCATTGTAGTAATGATTACTGATCACGTTGAATGTTTTGCGTATGCACAGATGAGGAAGCAAAATATCTTAAACGAGCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010449