BGIOSGA010501

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Revision as of 09:17, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010501| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010501, complete gene.| tag = OsI_121...")
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Gene Name

BGIOSGA010501

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010501, complete gene.

LocusTag

OsI_12115

Ensembl Transcript ID

BGIOSGA010501-TA

Ensembl Protein ID

BGIOSGA010501-PA

Length

7566

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19816824..19824389

Sequence Coding Region

19824342..19824389,19824047..19824169,19823295..19823444,19823157..19823230,19822100..19822151
,19821530..19821631,19819630..19819726,19819303..19819541,19818494..19818919
,19818226..19818316,19817103..19817314,19816824..19816925

Genome Context

<gbrowseImage1> name=IndicaChromosome03:19816824..19824389 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:19816824..19824389 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCGCCGCCGCCGCTGCCGCTGCACCACCAGATTATCAAGGTGGCAAGGGACGAGGATTTCCGCTCGCGTATCGGGAACGATGGCCGCTACTTCGATCTTGTCGACTTCAGCGCAATCGACGTATTCTACGTTCCGAATAGCTTGACCATCTACGAGTTCAAGATACCTTATAGGTTCAACTTGTCACAGGGTACGCTCATGGAGAAATTTGGAACCCCTGTGCAATGTCAACACCTCTGGTGGTGGGCTAGACGACTAAACAAAACATACCGTGTAGACAGGCCATTGACAACCGAAGAGGAGAAACTATCTGTGTGCAGTAAAAAGTATTCTTTTCATTTTGGCCTTAAGTCTGCTGTGTTGAGTAAGAAATCAGAGAAGGAAGGGTGCTCCACCCTCATTCCCAACCACTCAGGGATCAACGAAGATGATGCGCTGATTACAACTGGGGACATTATTTGCTACCAGAAAAGCCTGCCACAAAACTGGCGAATATATTCTTCTGTTGCATCTTTTCTCCAGCATGTTTGTGATCATAAGGAAGAAGAATGGAAGAGACACATTTTAGAAGAGGAGATTGCTGTGTTAAAACGCCAGGCTGATACAGATCGGCTTCAGAAAGATGAGAGCATGACAGTGTGTGATCAGTTGAAACATGAACGAGACAATGCTGTGCGACAAGTGAATGAATTATGTGATCAGAGCACACCTGTCATTCTCAATTTCTCCCGCAAGGACTTGGAGCAAGCAATAGAACATTTCAAAAATACTGGTGATTTTGGTGATACTGAATATGGGCACTTATATAAAGGCATGATACACTATACCATCGTGGCAATCAAGCTGTCTAGTTCCCAAAGCTTATTTCAACAAGAGCCTGGGACCTGCCCGCCAAACCTGATGGCAAGGCTGCCATACATGGACCCTGAGTTCAACACCACCGGGGAGCTCACAACACTCTCTGATGTCTACTCGCTGGGTGTTATCATCCTACAGCTCTTGACCGAAATGCCCCCCTTAACTCTATCAGAGAAAGTTGCGGAGGCATTGGAGAGTGATAGCTTGCACTTGCTGATAGATAAATCTGCAGGGGACTGGCCGTACATTCAAGCCAAACAGTTAGCACTCATTGGCCTTAGCTGCACTGAAATGACGAGGAAGAAACGGCCTGATCTCTTAACCAAAGTGTGGAAAGTTGTTGAGCCCCTGACGAGGAAGCCTCTTGCAGCCACCTGGCCATACTTGCAATCAGCAACAGGAGATAGTTGTGTCCCTTCTGCTTTCATTTGTCCAATCAGCCTGGAGATCATGAAAGATCCTCAAATGGCATCTGATGGATTCACCTATGAAGCAGAAGCCATAAGAAGCTGGTTTGATAGAGGGAATATATTAGGGGACTGGCCGTACATTCAAGCCAAACAGTTAGCACTCATTGGCCTTAGCTGCACTGAAATGACGAGGAAGAAACGGCCTGATCTCTTAACCAAAGTGTGGAAAGTTGTTGAGCCCCTGACGAGGAAGCCTCTTGCAGCCACCTGGCCATACTTGCAATCAGCAACAGGAGATAGTTGTGTCCCTTCTGCTTTCATTTGTCCAATCAGCCTGGAGATCATGAAAGATCCTCAAATGGCATCTGATGGATTCACCTATGAAGCAGAAGCCATAAGAAGCTGGTTTGATAGAGGGAATATATTAGGTCTCCGATGA</cdnaseq>

Protein Sequence

<aaseq>MPPPPPPLPLHHQIIKVARDEDFRSRIGNDGRYFDLVDFSAIDVFYVPNSLTIYEFKIPYRFNLSQGTLMEKFGTPVQCQHLWWWARRLNKTYRVDRPLTTEEEKLSVCSKKYSFHFGLKSAVLSKKSEKEGCSTLIPNHSGINEDDALITTGDIICYQKSLPQNWRIYSSVASFLQHVCDHKEEEWKRHILEEEIAVLKRQADTDRLQKDESMTVCDQLKHERDNAVRQVNELCDQSTPVILNFSRKDLEQAIEHFKNTGDFGDTEYGHLYKGMIHYTIVAIKLSSSQSLFQQEPGTCPPNLMARLPYMDPEFNTTGELTTLSDVYSLGVIILQLLTEMPPLTLSEKVAEALESDSLHLLIDKSAGDWPYIQAKQLALIGLSCTEMTRKKRPDLLTKVWKVVEPLTRKPLAATWPYLQSATGDSCVPSAFICPISLEIMKDPQMASDGFTYEAEAIRSWFDRGNILGDWPYIQAKQLALIGLSCTEMTRKKRPDLLTKVWKVVEPLTRKPLAATWPYLQSATGDSCVPSAFICPISLEIMKDPQMASDGFTYEAEAIRSWFDRGNILGLR</aaseq>

Gene Sequence

<dnaseqindica>1..48#221..343#946..1095#1160..1233#2239..2290#2759..2860#4664..4760#4849..5087#5471..5896#6074..6164#7076..7287#7465..7566#ATGCCGCCGCCGCCGCCGCCGCTGCCGCTGCACCACCAGATTATCAAGGTGCATCCCGTGGTTGCGGCGATCTTCTCCGTTCCCCTCATCCCCTCTTCTTGGCGCTGACCGATTGGATTCTCTCCCGCACAAGCACACGAATCCGTGGAGCGGGCCGGGGGTGGTTTGATTTGGATTCTGATGCTTCTTTCTTGGGTTTCTTGCTCTGCGCTGCTTATAGGTGGCAAGGGACGAGGATTTCCGCTCGCGTATCGGGAACGATGGCCGCTACTTCGATCTTGTCGACTTCAGCGCAATCGACGTATTCTACGTTCCGAATAGCTTGACCATCTACGAGTTCAAGGTAGTACCACCATATATTTCCAGATTTCCTTGAATCCCGGATGATGCCTATGCCTCTTTTTCGATGGTTTCTTTCTTTTTCTTTTTCTCTTTTTTTTTTGGCGAGGTTCTATGGTTTCTTTTTAGTCAGTGACATTTCGTGCACTGTTGTTATTCGGAAAATTATGTCAGAAGATGGATATGGGCCATATGGCGTCATCCTGTTTAGGATTAGAGGCTAATTAAGTTTGATAGTTCAGAAAATATGATGAGCATTAATTAGGGAAATGAGTTGCATGGCATGACATCTGCTGTTTTGAAGGAAATCTTTGTACTACAACTTAGGAATGTTCCTAGTCATTGTCATGGGAAGTATTGTGCTGGAGAACATGTAAACCAACCATTGCATTTGGTCCTTGTGAAGTTGTACTATATATACCACTCCAAAATAGTGAATTGGTAAATTAAAGTACAGCTCCAAAGTATGGTCTCTTTTAAATGTGCTACTTTAGGACACTTCTACTCTAATAATGACAATGTGATTATTTGCCACATGTAAGCTGACAACCCTGTATGACTATTTATTGTGCAGCTCGTCATTCTTATGCTCTATATTACGTATAGATACCTTATAGGTTCAACTTGTCACAGGGTACGCTCATGGAGAAATTTGGAACCCCTGTGCAATGTCAACACCTCTGGTGGTGGGCTAGACGACTAAACAAAACATACCGTGTAGACAGGCCATTGACAACCGAAGAGGAGAAACTATCTGTAAGTTAACATTGTGATCGCCTTATTTTCTGATTGGTTCTTCATACTGTTTTGTTCCATGCAGGTGTGCAGTAAAAAGTATTCTTTTCATTTTGGCCTTAAGTCTGCTGTGTTGAGTAAGAAATCAGAGAAGGAAGGGTTTCCTTCAAACCTGTGCATGTCTGATTGTTTTGCCTGAACTAGCACAAACTAAACATAGATACATTACTTCATTTTTCTAGTGGTTGACAACTTCATATGAATTTTGTGCTTCCTTGATTGGCTTCTTTGGCACCACAATTTTGAATTACGAATTCTGCTCTCGTTACATATGTCTTTTATTTAGTGCTACTAAGCGTTAAATGTTAGCTTGCAGTCATGCCATTTCATTTTCCTCAAAGGTGTGCTGAAGAGCAGATAAAGTTTTTGAAAGCAAAATTTGACTCTCAATTGATTGCTTTTTTTTTTAGCACGCCCGTTGGGTATATTCACTTTCAGAAGCTTGGTCTATTTGTAGCCATACCATCTTGATCAGATAACTTCTTATTAAAAAGTTAAATTTGATATGGTATGTGCCATTGTTACCCTTGTCATTCTTTGCTCAGCTATGGCTTCGTTCGTTGCTGGGTGATTGGGAGAGAAAGCCCCTCGTTTTCCGTGCGCACGCTTCCCGAACTACTAAACGGTGCGTTTTTTGCAAAAAATTTCTATAGGAAAGTTGCTTTAAAAAATCATATTAATCCATTTTTAAAATTTAAAATAGTTAATACTCAATTAATCATGCACTAATGGCTCACCTCGTTTTGCGTATCTTCTCAATCTCCTCAATCCCCTTCTCCTCAAACACACCCTATGTGTAACTATTCTTTGTTTTATGGTTATGCATGTCCTTTCTGTGCAAGGAAGAATTCTGCCTTTTGATTTGCGAAGTTCATATGGAAAGATCTAGAGATACCCTTTCTTCTAGTGAAAATTAAAATTACAAATGCACATTATTGTAGGTATCAAGCCTAAGGCATGGTGGCGATCATCTAAACTTTTTCTTGGAGGTTGAGCTTGAACTTTGGATAATATTTTACTATTCTTTTGGGTGAAAAGAATCCTTTTGATTTCATCCATCGATTTATCATTCTGTTGAAGTCTCAAAATATTGGCATGTTGTAGGTGCTCCACCCTCATTCCCAACCACTCAGGGATCAACGAAGATGATGCGCTGGTGTTTCTAAAGCTTTTTGACCCAGAAAAAGCACAGCTACAGTCAGCACTTTTTTGTTACAACTTATTTTGTCTTATTTATCAGTTGATGATACTAAATTTTGCTCCTCTTCTGAACGAGGAATTAAGTATGTTGGCTCGCTGTATGTGAAAGTTTCATCGAGGCCTTCAGATATTCTTCCAAAACTAAGAAGTCTAGCTGGTTTTTGTGCAAGCGAACCAATAGAATTGTATGAGGTCAGGTTTTGTACCGATGCAAATAGGTTCCCTGACTCTGAAATAAACAGATTTATCTCATTTGTACTGGTTTCTCACTTTGATAAGCAGGAGATAAAATTTGATCCATCAGTGATGTGTGAAGCTATTGACATTCATTTAACCTTTTCAGATAGTGGGGTTTGTTTCTTTTAACCTATCCTCTCTTAGTCTCTTTTGCACTCCCCATCCATGTATTATTTTCTTTCTACAGATTACAACTGGGGACATTATTTGCTACCAGAAAAGCCTGCCACAAAACTGGCGAATATATTCTTCTGTTGCATCTTTTCTCCAGCATGTTTGTGATCATAAGGTAGCTGTTCTGCTTTGCTATCTTCCCTGCTGTAGGTGACATTTTTCAGTAAACTTGTTACATATTGTTCTTCCTTATATGCTTTCTTTGACTTTTGATCATCCCTAACAGTATCTTTATGGTTAGGCTACGAGTTCCAAGTGTAAAGGTTTTTGACTTTCATGTTAAAGGTCTGATACTGAGATAGTTTCACAAATTGTCCAATGAAAAATATTTTGGCGATTTATACATAAGATCTAAGTCATATTTCTGCCATTTTTTACTCTCATTTAGTTCTCTTTTCTTTTTTTGGTGGGGGTATGGGGTGTGTGCAGCAGGCTGCACGGGCATTATTGCAGTGAATCTCCATTGGTGCAATGGACTATGATATGTTGTGTCATTGTGGCCTTAAAAATAATAACTGCATTGACCCATGGTCACACGGTACAGTGCATCCAACCAGGACTTGCGCTCTTGTTTAGGGGATTTGCTTATGAGGATGGATGAAAATATTAGAACTTGCACCAATGGGCATTCTAACCATTTCAGCTCAGTCGGAATCCCTTTCCACTGTTTATGTTAGGTTTAAGAACGCGGACCAGGGGTGTGTGTCTGGCTTGCGTAGATGCAACTTTATTTTGCTCCAGTTTGATGCTAAGTGAAAATTTTAACACTTTTAATGTTGCAGAGTTCACTGTACTCTGAATTAATTAGGCACAAAACACATAACATAAGCTGCCCCCACACCCCGCCACCACAGCTAAGCACCCATCAAACCAACAAATAAATACAACAAAGGCATGTAATGGCAGAAACATATGGAGGATACATACTTAATGAATGCAGGTATTTTATTTGTGCAATTTTATGCAGAAGATTTTTCTTTACGATGATTAGTTTATGCAAACTTTTGGATATAATATAACTCTTTAGAAACTGTAAAATCTAGTCATTTTGGTGGTAGATCCAAATAACAACTGTCAATGTTACATCTGTAAAATCTGATGAGAGAGTGGCTTTGGTAGTCCAAGGAAAGTGACAATGAAATCTCAATAAAAGATAAGTAAATAAAACAGAGTAATACTTGTTCCTGCTTATTATTACCTCAGCGGCATGTGGACCTGCATTAGTAATTTATGACACCATAATTCTACATGACCTCACAAGTTTGGTTATTGCTTCCTAAATCCCAAGATAAAAATGGCTAAAGAAGTTAACATTTTTTGTGAGCACCCGCAAAGAAAATTATAAATTGCAAGCGATGCTCAAATACTTGTACTTCTTTTATTGTTTTATTTTTGGATTTTTTTTGAAAATGTAAACATGAAATGGAAGCCCTTACGTTAGTCCTTTCATTTCATGTTTACTTTAATCCCCATGCTTATTTTATGTAGACATACAAGGTTCACCAATAAGCTTATAAGCACAACTTTTGTCAAGCTTAGCGGCTTTGTAGTTTAAGCGTTTCATTTTTCAATGCCATTCTTTCTCCTTTTATCTTTTATAATCTCTGGAAATTAAATTTCATTTTTTTAGAAAAAATGAATATTACACCTATCATGTTTCCACGTTTTAATTTCTTCTTTTGTGTGTCCCTGTGTAAATTTTGTACTTTTACTTGCTAAGGAGTATTCTTTAGTGACCGGCTTCTAGTGGACTAAGCTACGCACTGTTCAGGTTGTTTTTTCTTGTGTCGGGGGGGGGGGGGGGGGGGCAAGTTGATGTTCTGTATAATTAGGGTGAACAAGTGCACTTTTTTGTTAACTTTGATCTCTTATAGATTGCTCTTTTGTACTTTACCAAATATATATGAATTACATGTAGGAAGAAGAATGGAAGAGACACATTTTAGAAGAGGAGATTGCTGTGTTAAAACGCCAGGCTGATACAGATCGGCTTCAGAAAGATGAGAGCATGACAGGTATATCAGCAGAACAATCTTTTTTTCTTGTTTTGAACTGAAGGATAAATTAACACAGCAATATATAAACCCCATCTTTGTAATGAAGTGTGTGATCAGTTGAAACATGAACGAGACAATGCTGTGCGACAAGTGAATGAATTATGTGATCAGAGCACACCTGTCATTCTCAATTTCTCCCGCAAGGACTTGGAGCAAGCAATAGAACATTTCAAAAATACTGGTGATTTTGGTGATACTGAATATGGGCACTTATATAAAGGCATGATACACTATACCATCGTGGCAATCAAGCTGTCTAGTTCCCAAAGCTTATTTCAACAAGAGGTAACCTGGTCCACTTGTGATGCTTGGTGTTAGTTGATTCCATTAGTAATGTGAGATTATTGCACATTTCTATTCTTCGGCAATGGAGACATCCAAATATTATCACAATCATCGGAGCGTGCTCAGAGGCCTTCGCTCTAATATATGAATGGTTACCTAATGGGAATCTTGAAGACCGCATTGTTTGCACAAATAATTCTCCACCTCTCTCATGGCACAACCGCACACAGATCATTGGGGAGATTTGTTGTGCTCTGCTTTTCCTTCATTCGAACAAGCCTACTGCCTTGGTCCATAGTGATCTCAGGCCTTGCAACATCCTCATTGATGCCAACTACAGAAGCAAGCTCTGCAACTTTGGTTTGTCCAACCTGTTTCTGCAGCCTGGGACCTGCCCGCCAAACCTGATGGCAAGGCTGCCATACATGGACCCTGAGTTCAACACCACCGGGGAGCTCACAACACTCTCTGATGTCTACTCGCTGGGTGTTATCATCCTACAGCTCTTGACCGAAATGCCCCCCTTAACTCTATCAGAGAAAGTTGCGGAGGCATTGGAGAGTGATAGCTTGCACTTGCTGATAGATAAATCTGCAGGGGACTGGCCGTACATTCAAGCCAAACAGTTAGCACTCATTGGCCTTAGCTGCACTGAAATGACGAGGAAGAAACGGCCTGATCTCTTAACCAAAGTGTGGAAAGTTGTTGAGCCCCTGACGAGGAAGCCTCTTGCAGCCACCTGGCCATACTTGCAATCAGCAACAGGAGATAGTTGTGTCCCTTCTGCTTTCATTTGTCCAATCAGCCTGGTAAATAAATCTGTAATCATCATTTTTGTAGCTTCAATTCTGGATATATGCTCCCAAGGTCTTTTCCATGTAGTGCCTACCACTTGTGAATATCCTTTTCTGTTTTCCTTGAAATGTTCAGTGATCAAAATTTTAATGGTGCATGTGTGATATGTTACTCTCTTGTTGATATTTCAGGAGATCATGAAAGATCCTCAAATGGCATCTGATGGATTCACCTATGAAGCAGAAGCCATAAGAAGCTGGTTTGATAGAGGGAATATATTAGGTCTCCGATGACACACTTGGTCCTTCCCAATCTCACTCTCATCCCTAATCTTGTCCTCTTTTCTTCCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACTTTGTCAAGAAGCAAGTGAGCAGTAGAATAAGAGCTAACCATATAGATCTAAGACGTGGCACCCTGACTGCATACCGGTTAGGCAATAGTTAAATATTCATGGTCATCGCTAAAACCACTACAACCATTGGTGTGGAACTCTAATCCAAGCAAGTGCCTTGATTTGTTGGTTAAACATGAACTCAGAATATCACCACCAGAAAATGTTGCAGAGGAAGATTGGGGGAGAGTAATGGACTCTGTAATTTGTCTGATGGCTGGTCCACGCTGGTCCACTTCTTTTTTATTTTCAATGAAACTGAATAGTGTATCTAGATGTTCACTGACAGGATTTGGAGTGCATAAACTTGGCATACATGTGAGAAATCATGCATCATGATTACAGAGTATAAGTGGATCATACTGTTGGAACCCAACACTAAGTGATCATTTTCATCCATTGTTGTAAAGATCATCTGAGTAATTTGCAGTTCCTTCAATACTGTTTATCGTCCTTGCAAACATCATACACAAATATTAGATCTGTTAATGAAATGAAGGTCTAAAATTATTTTATTTGAGTAAAAATATATTTAATACACATATTATTAACAAACGATAGATAGAAGTAAAAAAATAAAATCAAAAAGTGTGTGTGAGGCACAGAGAGCTGAGCAACATTAAAATTTGAAAAAAAAAATGGAAAAGAACGTGCCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTGATAGCTTGCACTGCTGATAGATAAATCTGCAGGGGACTGGCCGTACATTCAAGCCAAACAGTTAGCACTCATTGGCCTTAGCTGCACTGAAATGACGAGGAAGAAACGGCCTGATCTCTTAACCAAAGTGTGGAAAGTTGTTGAGCCCCTGACGAGGAAGCCTCTTGCAGCCACCTGGCCATACTTGCAATCAGCAACAGGAGATAGTTGTGTCCCTTCTGCTTTCATTTGTCCAATCAGCCTGGTAAATAAATCTGTAATCATCATTTTTGTAGCTTCAATTCTGGATATATGCTCCCAAGGTCTTTTCCATGTAGTGCCTACAACTTGTGAATATCCTTTTCTGTTTTCCTTGAAATGTTCAGTGATCAAAATTTTAATGGTGCATGTGTGATATGTTACTCTCTTGTTGATATTTCAGGAGATCATGAAAGATCCTCAAATGGCATCTGATGGATTCACCTATGAAGCAGAAGCCATAAGAAGCTGGTTTGATAGAGGGAATATATTAGGTCTCCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010501

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA010501&oldid=55324"