BGIOSGA010510

From RiceWiki
Revision as of 09:17, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010510| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010510, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010510

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010510, complete gene.

LocusTag

OSJNBB0021K20.13

Ensembl Transcript ID

BGIOSGA010510-TA

Ensembl Protein ID

BGIOSGA010510-PA

Length

5283

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19630067..19635349

Sequence Coding Region

19635311..19635349,19634219..19634304,19633761..19633855,19633294..19633671,19633029..19633193
,19632736..19632850,19630307..19630531,19630067..19630190

Genome Context

<gbrowseImage1> name=IndicaChromosome03:19630067..19635349 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:19630067..19635349 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCGCCGTCGCTCGTCCTGCTGCTTCCGCCGCATCCAATGAAATGGTTTGTGGGATATGTGGCAGTGGTCATGACCAAGATAGAATGGCAAAATGTATTCGGTGCAATGTCTATCAACATTGTTATTGCTTCCCAGTGGTGACATATGATGTTCCTGATGAATGGTGTTGTTGTGAGTGCCAAAACAAGTCCAATTGGAACCAAACTCCTAGTCAAGGTGGGCAAACTATCAGGAATAGAGTCCATCAAGATAGCCTGAAAATTCCAAACAAGTTTGAAAATGCCAAAGTGAAATACATTTCTTATGAAGAGGCGTCATTATTGAATAATAATGAGAGACCACCAAATTGTAGGTCAAATTTTCATGTGCGACGTACAAATAGTCATGTCCGTCCTGCATCTCCTCCAAATGCGAAACCGTCATCTAGTAGGAGTGACAATCGTGCTTATAGCCAGTTCCATCGGAAATTTCCAAATGGGCAGCAGTCCCCCTGTAGGAGTGACACTCAAGGGCCTTTTCTGAAACGAGGTGATGGTGCAAGTCAGAACCAGACAGAGATTGCTGGTATAATCATGAAACAGAAAGCACAATCAGGTGAGATGCTTCGTCCATGTCATAGAAGCAGAGCAATTAGAGGAAAAATTGACTTTCAGGTTCAAAATGAGCAGAGGGAAAAGAAGGTAGTTAGTGCAGATAAAGTAACAATGAACCCCCAGAGTCGGGATGATCCTAGAGAAAAGAGTGGATCCAATGTTACAGGTACTGATATTGGACGTGGATCTGAAATGAGTCCGGACAATGATATAGGCATGCTGGTGGTCATTAATTCAAGTGTGGAATATGCAAGACAACCTCCACCAGAAATTTGTTGGACGGGATGCTTTCTTGTCTCCAATGGATCAAACTGTAATCCTGCTGATTTTAAAGCTTACTGCCCATCAAAAGTGTCGTCTAAAGTTCTCAATGTCATCAAGAGCATGCCTAGTATAATAGAGTTGGATATATTGCCTCGAATGGATGAATGGCCAAAATCTTTTGAGATAAATCCACCAGTTTATGAAGACATTGGCTTGTTCTTCTTCTCCACTGAACTTGACCGGAATGGAAAGAGTCAATCTCATGTCATGGAGACGAGCTGCAATTTTGTTATGAGGGCATATATCAACAATATAAAGTTGCTGATATATTCCTCAGAAGTGCTTCCACCTGATTCCCAGTGTTAG</cdnaseq>

Protein Sequence

<aaseq>MVAVARPAASAASNEMVCGICGSGHDQDRMAKCIRCNVYQHCYCFPVVTYDVPDEWCCCECQNKSNWNQTPSQGGQTIRNRVHQDSLKIPNKFENAKVKYISYEEASLLNNNERPPNCRSNFHVRRTNSHVRPASPPNAKPSSSRSDNRAYSQFHRKFPNGQQSPCRSDTQGPFLKRGDGASQNQTEIAGIIMKQKAQSGEMLRPCHRSRAIRGKIDFQVQNEQREKKVVSADKVTMNPQSRDDPREKSGSNVTGTDIGRGSEMSPDNDIGMLVVINSSVEYARQPPPEICWTGCFLVSNGSNCNPADFKAYCPSKVSSKVLNVIKSMPSIIELDILPRMDEWPKSFEINPPVYEDIGLFFFSTELDRNGKSQSHVMETSCNFVMRAYINNIKLLIYSSEVLPPDSQC</aaseq>

Gene Sequence

<dnaseqindica>1..39#1046..1131#1495..1589#1679..2056#2157..2321#2500..2614#4819..5043#5160..5283#ATGGTCGCCGTCGCTCGTCCTGCTGCTTCCGCCGCATCCGTTACGCACATCCTCTTTCCCATCTCTCTCTCTCTCTCTCTCTTTCTCTACCCACGCACTTTTTCATTAATTTGCGTTTGCCCTAGCTTCTTGTTCTGCAAATTTGCCTTAGCCTTAATGCTAGTAACAGTTTGATGGTTCCCAAGAAGGTTTGGGGGGTTCAACTGAACCCCCATTGTCCCATGTTAGATCCGCCGCTGGTGAACCAGCAGAAGAACAATGGGAATTTGGCAGTTGTAGCATTTAGTGCACAGCTTACGACTCCTTTTAGCGCTTCCAAACATTTTGGCACTTGCATATTTAGCTGCACATGTTGGCACTTTTGCATTTTGGCATGAGGTGCGATCTTTGTTGCTGTGACAAATTGTAATTTATAAGGTGATTTTGCATCTTGTCCTCCATTAGCTTAGAAACACGCTCAACCATGGCCATCTATTTCGGCATCTCCCTAAAAAGTCCCTCTTCACTTCAAGTCAACTTAGGATGACCTCAAAAGAAGCCTCTTTTTTTTCTTGGTAACATGGTATATGGGCGAAATGAACTTCTGTTTGTGCATTCAATCTTCCAACATTTTCAGTTTCTGGATGATCCATTTATCGTCCATTTCTTTTGTGGACATGCAGAGTAGTCTTTCGGAGTTTAGTAGCTTTAGTTACTTACAAGTTTTGAAAAAAAAAACAGGTTGTTCAGCTTTGTTTTATCATTTGTTTTTTTTTTTTGTTTGCGCCCCAATGCTTTACGTTTCATGACCACAGAGATACTGGCGCTTTCTTGAAACTATACTTACGCTGTGCTATTTGCTCTATGGATTTAATTTACTACGGCAAAGTCAATTGTTTTATTTGCTTATTGAGTTGTGTTTTTATATTTATCCCATTTTTTTAAATTTTTTTGTGTATGTTTATTTCACATTTACAGTTTTATATCTCCACAAGACAGTAACATTGCAAAAGTGAAAACAAAAATATATGTAGCGACATACATGACATTTTTGTTTACACTGCAGAATGAAATGGTTTGTGGGATATGTGGCAGTGGTCATGACCAAGATAGAATGGCAAAATGTATTCGGTGCAATGTCTATCAACATTGGTAATCCTTTCTTTTCCTACACTGTCTAATTTTCCTCTTTATTGACTTGTACATAGACATCTGCCTATATACACCTATGTACCAATTCATTGCTAGCATGTTTATTTGTCAGAATGCTTGGAGAGAAAACTGACCCATAAGGGAAACAGAAATATCTGATATGAAATTTGTATGGTTATTTTAATAGAGCAAGTGACATGGACATTTTATAGCTGGTCCTGAATGTACCATTTTCATTTTTTTTACCCAACATAAAAAACATGTCTTTATCCATTAGCTTTTAAAGTTATTTAGGGAAGCTCCTGCAGTTGGTTGTTAAACATATATTCAAATCACTGAAAGATTTTCCATCTGCTTTTGAAGTTATTGCTTCCCAGTGGTGACATATGATGTTCCTGATGAATGGTGTTGTTGTGAGTGCCAAAACAAGTCCAATTGGAACCAAACTCCTAGTCAAGGTAATATTTTTTTCTCATTTAAATAATACAAACCATCTCATTTTTTGAGTTAATAGTGCAGATCATAATTCTTGTCTGCTCATGTGAAGGTGGGCAAACTATCAGGAATAGAGTCCATCAAGATAGCCTGAAAATTCCAAACAAGTTTGAAAATGCCAAAGTGAAATACATTTCTTATGAAGAGGCGTCATTATTGAATAATAATGAGAGACCACCAAATTGTAGGTCAAATTTTCATGTGCGACGTACAAATAGTCATGTCCGTCCTGCATCTCCTCCAAATGCGAAACCGTCATCTAGTAGGAGTGACAATCGTGCTTATAGCCAGTTCCATCGGAAATTTCCAAATGGGCAGCAGTCCCCCTGTAGGAGTGACACTCAAGGGCCTTTTCTGAAACGAGGTGATGGTGCAAGTCAGAACCAGACAGAGATTGCTGGTATAATCATGAAACAGAAAGCACAATCAGGTATATCGATATACCTAGTTTTTCTTTATCTATGAAATATTAAGCTATTGCATCAACCAGAAAATGACATTTACAAGAAAACGTAATCAATGGAAAACAGGTGAGATGCTTCGTCCATGTCATAGAAGCAGAGCAATTAGAGGAAAAATTGACTTTCAGGTTCAAAATGAGCAGAGGGAAAAGAAGGTAGTTAGTGCAGATAAAGTAACAATGAACCCCCAGAGTCGGGATGATCCTAGAGAAAAGAGTGGATCCAATGTTACAGGTATTACACATATAAAAAGCATTTTCTTGATGGATTAACATTACAATTTTTTATACAGTATATTCTTTTTGTTAGCAGTTCAAACCATAATTCTGAACTTAATATATTTTTGTTCAAATCTCAAACCAAGTTTTCATGTGTTATTTATTTATTATGGTCTATTGTCCTGCTCTAGTAGGTACTGATATTGGACGTGGATCTGAAATGAGTCCGGACAATGATATAGGCATGCTGGTGGTCATTAATTCAAGTGTGGAATATGCAAGACAACCTCCACCAGAAATTTGTTGGACGTGAGTAAAACATGCTATATTTGTTTGTAATTATTTTATTTCAGCAATCTTTACCTTTGTTCTGGTTAAAATGTGAACTGAGCTTCTGTTGTGGTTCCCATAGTGTGGTCACTCACTTACTACCCTACCGCTTTACAAAACTTTGCATAGGTGCACATGTAGAGCCAGTGATTCCATTTTCATTGACTGTTACTCTGATGACCTACATTACGCGCACATTCAGTCATTACTGGACTGCAGGTCTGCCGCAGATCTGCATCTACTATTGGTAGTATTTAGCATGTATCAAGTTGACATTGACGAGAAATTAAACAGTTTACTACAGCAATTTCTTTCCTCACCAAATTGCAGATGTGGAGTTATACCTTTTGAAATATAATAATTGAATAGTATGGGTGTTTTATGTGGTTGCATGCTACTGTCTGTGTAGTTTCTTTTCTTATGTATATATACCATATATGTATGGTAGGTCTGTATTCACCATTTTCAGAGTAAGATTCACAATGGTTTTCTTTTTTCTGGAACTAAAAATCGCATCTGCATAGTCAACTTTGATATATGTTTATACCTAAGATAACAAATGAACAGCTTCGGTTCAGCTAGCTATACCCCAATGGGACTGATTTATTCTTTGCTGTAAGATTGGCAAAAGATCCACATGACCCACATAATTCAAAAATGTCAGAATTAGTTATTGATCTATTGGACATAATGTACAGTTTCATTCATAGTTGCACAATAAATGACCATTTTCATTGTAATTTCACGATGAAAGTTTACAAAGGAAATCAAGGGTGTAATTAGGGTAATATTTTCACTCTGTACCCCTTAATGCTGTAACAAAATTGAGTTATATTGCACCTTTTTTTTATGCAAGCCTATCTCTTATTTTCTCTAGGCATGAGCATGTGAAACATGCCCATGCAGATGAACACTCCTTCGTTTCTCACTCCATTTGTTTGAGAGGTGCACCACTACCTCTTTTGAAGTAAGACCTACAATTTCAAGGTTATTGGTTGTTGATGTTAGTTTTGGGTAAATTGAAAATTTATCAGCTATTCAGGAGTGTAATTAACTACATATCATTGTATGAGTAAGCAGGAATATTGTATGGTTGAAATATTGTCAACTGACCATTCTTTCCAAATTGGCATCTGTAATCTTCTCAAAAGTAAAAGAAACACGGAGACAATAGCTCCCGTAATCCCATAAGGTAAAGAAAAACAAGTATCAGTAATGCGTCTATAAGTCATTGATTCTGTGTGTTTACACCCGGCAAGTTCGGTCATTGATCCTTCAAAGGTTCGGACTGTCTTCTTCCATTGTGCTGAGCCAAGACGCAAATCGCTTCTTTAGCTGGTGGTTCAGGGTAGTGAGAGATGTTGAAAAGGACTTAAAGAAAGATTTCAATTCATTTGTTATACTTGTGGCTTTGGAGATCTGGGAGCATAGGAATGGTAGTGTGTTTGATGGCACAAGTCCTAGTGTGATGTCTGTAGTACAAGCAGTAGCAAATGAAAGTGCCCTTTTGTGCTTGGTTGGAGCTTCTAAGCTCCGAGATTTGCTCAGTAGGCCGCTAGTCCCTACCGAGTAAGGGGGTCGTTCTGAGGCTTTTGTAATTGTAAGACTGGTTTGAGTTTAGGGCTGGGGTTCCTTTTCTCTTCCCTGTGTTTTCTCTACTGCTTGTTCAGGAAAGAAAAAAGGAGACTATATTCATGTCAGAACTTAAGGATCACAAACAAAATTGGATAAATGACAATATCGCATAATTCAGTAGTCATTTTATATTCACTATTTCCTTCTAGGCTAGCTGCCTGAAGACAAAAAAACACTAATGCCCATTTAGTAGTCAGTGTGACTTTTTATTACTCTACGAGGTGGCATGCTACCATGTTAAACATCTAGGTCCTTGAATATAATGGATGATTTATGTTACTTGGGTGTAACTTACAATTAATCACTGTGTCAAGTTGATTGTTTCAGTAAGAGCTTATCTTACTATGTTATCCTCTGTCTTAGGTTTTTATAATTTAGGTACTTTAAATGTTTTTCATCTCTTATTACCTTGTGCAGCATTGATTTCATTTGTTTAACTGCTATTTCTTTTGCATAGGAATTTTACCTCATATAATGAATTTACTTTACTAGAGATGATTTAATTATACATAATAGAGTGAAAGTTTCTGATTTTCTTGTGCTCTTAGGGGATGCTTTCTTGTCTCCAATGGATCAAACTGTAATCCTGCTGATTTTAAAGCTTACTGCCCATCAAAAGTGTCGTCTAAAGTTCTCAATGTCATCAAGAGCATGCCTAGTATAATAGAGTTGGATATATTGCCTCGAATGGATGAATGGCCAAAATCTTTTGAGATAAATCCACCAGTTTATGAAGACATTGGCTTGTTCTTCTTCTCCACTGAACTTGACCGGTAGGGTTTATACTGGTTCCATTGACAAATACTTGGTGTTTATATGCTGTTTCATGTTCTTCCTTTCTTGTCAATACATATATGAATGTTGATGCATTTATTTCTCATATTTTTAGGAATGGAAAGAGTCAATCTCATGTCATGGAGACGAGCTGCAATTTTGTTATGAGGGCATATATCAACAATATAAAGTTGCTGATATATTCCTCAGAAGTGCTTCCACCTGATTCCCAGTGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010510