BGIOSGA010570

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Revision as of 09:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010570| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010570, complete gene.| tag = OsI_119...")
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Gene Name

BGIOSGA010570

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010570, complete gene.

LocusTag

OsI_11950

Ensembl Transcript ID

BGIOSGA010570-TA

Ensembl Protein ID

BGIOSGA010570-PA

Length

4354

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18114595..18118948

Sequence Coding Region

18118839..18118948,18117982..18118111,18117735..18117886,18117422..18117614,18117178..18117296
,18116842..18117058,18116662..18116757,18116407..18116580,18116203..18116319
,18115953..18116119,18115624..18115848,18115219..18115537,18114876..18115120
,18114595..18114781

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18114595..18118948 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18114595..18118948 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAATCTGCCGGCGACCGCGTCCTGAGCCGCCTCCACAGCGTCAGGGAGCGCATCGGCGACTCCCTCTCCGCCCACCCCAATGAGCTCGTCGCCGTCTTCACCAGGCTGGTTAACCTCGGAAAGGGAATGCTTCAGGCCCACCAGATCATTGCTGAGTACAACAACGCAATCTCTGAGGCTGATCGTGAGAAGCTGAAGGACGGTGCTTTTGAGGATGTCCTGAGGAGTGCACAGGAGGGGATTGTTATCTCCCCATGGGTTGCCCTTGCCATCCGCCCGAGGCCCGGTGTCTGGGAGTATGTGAGGGTCAATGTGAGCGAGCTCGCTGTTGAGTTGCTGACAGTCCCCGAGTACTTGCAGTTCAAGGAACAGCTTGTGGAAGAAGGCACCAACAACAACTTTGTGCTTGAGCTGGATTTCGAGCCATTCAATGCCTCCTTCCCTCGTCCTTCTCTGTCGAAGTCCATTGGCAATGGTGTGCAGTTCCTCAACAGGCATCTGTCATCGAAGCTCTTCCATGACAAGGAGAGCATGTACCCACTGCTCAACTTCCTTCGTGCACACAACTACAAGGGCATGACCATGATGTTGAATGACAGAATCCGCAGTCTCAGTGCTCTCCAAGGTGCTCTGAGGAAGGCTGAGGAGCATCTTTCTGGTCTTTCAGCAGACACCCCTTACTCAGAATTCCACCACAGGTTCCAGGAACTTGGTCTGGAGAAGGGTTGGGGTGACTGTGCCAAGCGTTCCCAGGAGACCATTCACCTCCTTTTGGACCTTCTTGAGGCCCCTGATCCGTCCACCCTCGAGAAGTTCCTTGGAACAATCCCAATGGTGTTCAATGTTGTCATTATGTCCCCACACGGTTACTTCGCGCAAGCCAATGTCTTGGGTTACCCTGACACTGGAGGGCAGGTTGTCTACATTTTGGACCAAGTCCGTGCTATGGAGAATGAGATGCTTCTGAGGATCAAGCAGCAAGGTCTCAACATTACACCACGCATCCTTATTGTCACCAGGTTGCTCCCTGATGCAACTGGCACCACCTGCGGTCAGCGTCTTGAGAAGGTCCTTGGCACCGAGCACACCCACATCCTACGTGTGCCTTTCAGAACTGAAAATGGAATTGTTCGCAAGTGGATCTCACGTTTTGAAGTCTGGCCGTACCTGGAAACATTCACTGATGATGTCGCGCACGAAATTGCTGGAGAGCTCCAGGCCAATCCTGACTTGATCATCGGAAACTACAGTGACGGAAACCTTGTTGCATGCTTGCTTGCACACAAGATGGGTGTTACCCATTGTACCATTGCCCATGCGCTTGAGAAAACCAAGTACCCCAACTCTGACCTCTACTGGAAGAAGTTTGAGGATCACTACCACTTCTCATGCCAGTTCACAACTGACTTGATTGCGATGAACCACGCTGACTTCATCATCACCAGTACCTTCCAAGAGATTGCCGGAAACAAGGACACTGTTGGTCAGTATGAGTCTCACATGGCATTCACCATGCCTGGTCTGTACCGTGTTGTCCACGGTATTGATGTTTTTGACCCGAAGTTTAACATTGTCTCGCCTGGTGCGGACATGTCCATCTACTTCCCTTACTCTGAGTCTCGTAAGAGGCTCACCTCCCTCCACCCAGAGATTGAGGAGTTGCTCTACAGCGAAGTTGACAACAACGAGCACAAGTTTATGCTGAAGGACAGGAACAAGCCAATCATCTTCTCCATGGCTCGTCTTGACCGTGTCAAGAACTTGACTGGTCTGGTTGAGCTGTATGGTCGCAACCCTCGCCTGCAAGAGCTGGTTAACCTTGTGGTTGTCTGTGGTGACCATGGCAACCCATCTAAGGACAAGGAGGAGCAGGCTGAGTTCAAGAAGATGTTTGACCTTATTGAGCAATACAACTTGAATGGCCACATCCGCTGGATCTCCGCGCAGATGAACCGTGTCCGCAACGGTGAGCTCTACCGTTACATCTGCGACACCAAGGGTGCTTTTGTGCAGCCCGCTTTCTACGAGGCATTCGGTCTCACTGTTGTTGAGTCCATGACCTGTGGTCTCCCGACATTCGCAACCGCCTATGGTGGTCCAGCTGAGATCATCGTGAACGGAGTGTCTGGCTTCCACATTGACCCATACCAGGGTGACAAGGCCTCGGCGCTGCTCGTTGAGTTCTTTGAGAAGTGCCAGGAAGACCCCAGCCACTGGACCAAGATCTCGCAGGGCGGTCTTCAGCGTATCGAGGAGAAATACACCTGGAAGCTCTACTCTGAGAGGCTGATGACCCTCACCGGCGTCTACGGATTCTGGAAGTACGTCTCGAACCTGGAGAGGCGCGAAACCCGCCGCTACCTTGAGATGCTGTATGCCCTCAAGTACCGCACCATGGCTAGCACCGTCCCGTTGGCCGTCGAGGGCGAGCCGTCGAACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGESAGDRVLSRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKGMLQAHQIIAEYNNAISEADREKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVRVNVSELAVELLTVPEYLQFKEQLVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVIMSPHGYFAQANVLGYPDTGGQVVYILDQVRAMENEMLLRIKQQGLNITPRILIVTRLLPDATGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPSNK</aaseq>

Gene Sequence

<dnaseqindica>1..110#838..967#1063..1214#1335..1527#1653..1771#1891..2107#2192..2287#2369..2542#2630..2746#2830..2996#3101..3325#3412..3730#3829..4073#4168..4354#ATGGGGGAATCTGCCGGCGACCGCGTCCTGAGCCGCCTCCACAGCGTCAGGGAGCGCATCGGCGACTCCCTCTCCGCCCACCCCAATGAGCTCGTCGCCGTCTTCACCAGGTTCGTGCTGATTTAGTGATTTCCCAGCATTAGATTTTGTTGGTTTCTAGTCTACTGCCTTCAGATGTTACTGTATTTTCTTTTAGAAGGAGATGTTCATATAGGATCTTTGTTGTTGAGATTGTTAGATCTGGCCAGGAATGGCTCATATTTACTGAATTGGATGCAATCATTTTGTAGTCACTTTTTTTTTAAGTTTCTGATTAGAATGAATATTTAAGTGCGGCCTTCTGCAGCCAAGATTTTGTACAAACCTAGTACTACTGAATAATGATGAAATATACAAATGTAGTTTTGGATTACTGTGGACTGGTAGTGCTAGATCTGACTGCATGTGCATGTTATTTATATTATATATACGGTTTACAAACTGAATACAAGTAATGAATTCTGCACTGGTACAGATGCTTGTTGTGGTAGCAAAGTTTCACAAAAAAAATAAAAATCCTACATCTTACTAGATCTATTGGCGCGAGCGCGTAGATCTGATTATCGCGCATATTTCATTAAGTCCAATTAAATGGTCAAAACTAATCATTTCATATCTACAATGAAATTTTTAATTCATCTCAATGCAAACAGATTATATATGGTCTTTTTAAGTGGCTAATAGCAATTTTCTTATTATGCGCAAATGCTCAAGTGCTAAAATTATCTTATTGAGATATTTATAGGCTGAGTTGATAGATCTGGCCTGATATTTTTGTTGACACTGTTATTTGCGCAGGCTGGTTAACCTCGGAAAGGGAATGCTTCAGGCCCACCAGATCATTGCTGAGTACAACAACGCAATCTCTGAGGCTGATCGTGAGAAGCTGAAGGACGGTGCTTTTGAGGATGTCCTGAGGAGTGCACAGGTTTGAATCAGATTCAGATTTCATTTCATCACAGAGATCTATCTTTACTCTACCGCTTGCTCTAACTTAACTTGTAATTGTTTTTTATCATGCAGGAGGGGATTGTTATCTCCCCATGGGTTGCCCTTGCCATCCGCCCGAGGCCCGGTGTCTGGGAGTATGTGAGGGTCAATGTGAGCGAGCTCGCTGTTGAGTTGCTGACAGTCCCCGAGTACTTGCAGTTCAAGGAACAGCTTGTGGAAGAAGGGTATGAAATCTGCATAATTGGGATACTAAAAACATATATTCTTAAAATTTAAAACTTAATTTTATTATTTTTCTTTTATCGATATATATGTCATTGTAATATCTCTGATGTATATTTCAGCACCAACAACAACTTTGTGCTTGAGCTGGATTTCGAGCCATTCAATGCCTCCTTCCCTCGTCCTTCTCTGTCGAAGTCCATTGGCAATGGTGTGCAGTTCCTCAACAGGCATCTGTCATCGAAGCTCTTCCATGACAAGGAGAGCATGTACCCACTGCTCAACTTCCTTCGTGCACACAACTACAAGGGCATGGTAAGGCAGCTTCATACTATTTCCTCATCTCACATTTTTGTACTATGGCATATTAACATGAATTGAATTGATTTTGAGATGGAAGTATAAATTCTGAATGGATGGAATATATATTTTTTCTGCAGACCATGATGTTGAATGACAGAATCCGCAGTCTCAGTGCTCTCCAAGGTGCTCTGAGGAAGGCTGAGGAGCATCTTTCTGGTCTTTCAGCAGACACCCCTTACTCAGAATTCCACCACAGGTACTGATAATTATTTTTTACATATTATGAACTCTAGAATGTATTTTGATATGAAACCACCGAAGATATTTTGCCAGTATTGTTGTGACTAAAAATGACCATTTGATTGGAAAATACAGGTTCCAGGAACTTGGTCTGGAGAAGGGTTGGGGTGACTGTGCCAAGCGTTCCCAGGAGACCATTCACCTCCTTTTGGACCTTCTTGAGGCCCCTGATCCGTCCACCCTCGAGAAGTTCCTTGGAACAATCCCAATGGTGTTCAATGTTGTCATTATGTCCCCACACGGTTACTTCGCGCAAGCCAATGTCTTGGGTTACCCTGACACTGGAGGGCAGGTAGAATTCTTAATTTTGACATTTGTTCATACTTAAAAAAATTAAACCTGTTCTCATTATTCTTTGTGCTATGATTACCGAAAGGTTGTCTACATTTTGGACCAAGTCCGTGCTATGGAGAATGAGATGCTTCTGAGGATCAAGCAGCAAGGTCTCAACATTACACCACGCATCCTTATTGTAAGTGGGATACCTGATATGGTGCAATACAACTTGTCAGCTATAGCAATATGATATTTAACCTTCTTTGGTCTTGAACAGGTCACCAGGTTGCTCCCTGATGCAACTGGCACCACCTGCGGTCAGCGTCTTGAGAAGGTCCTTGGCACCGAGCACACCCACATCCTACGTGTGCCTTTCAGAACTGAAAATGGAATTGTTCGCAAGTGGATCTCACGTTTTGAAGTCTGGCCGTACCTGGAAACATTCACTGATGTAGATACCTAACCTCGCTGTCACACCTTCTTGGTTATTCATTTATTAAAGATAAACTTCATATTGACTCTTTCCCATGGATGTCAGGATGTCGCGCACGAAATTGCTGGAGAGCTCCAGGCCAATCCTGACTTGATCATCGGAAACTACAGTGACGGAAACCTTGTTGCATGCTTGCTTGCACACAAGATGGGTGTTACCCATGTACGCATTTTGACTACTCTGATCAGAAGTGTTTTAACTACATATTTGCTCATGCTCATGTTGCCTTGTTCCATGATATGCAGTGTACCATTGCCCATGCGCTTGAGAAAACCAAGTACCCCAACTCTGACCTCTACTGGAAGAAGTTTGAGGATCACTACCACTTCTCATGCCAGTTCACAACTGACTTGATTGCGATGAACCACGCTGACTTCATCATCACCAGTACCTTCCAAGAGATTGCCGGAAAGTAATATTTCTATACAACTAAAGTTTTCTGGGTCACATCCGTCAGTTATGTCGTAAAAATGCAATTACCTTTCCATGATCTAATGGCATTTTCTGGTTTTTCAGCAAGGACACTGTTGGTCAGTATGAGTCTCACATGGCATTCACCATGCCTGGTCTGTACCGTGTTGTCCACGGTATTGATGTTTTTGACCCGAAGTTTAACATTGTCTCGCCTGGTGCGGACATGTCCATCTACTTCCCTTACTCTGAGTCTCGTAAGAGGCTCACCTCCCTCCACCCAGAGATTGAGGAGTTGCTCTACAGCGAAGTTGACAACAACGAGCACAAGTAAGAAGCGGTTTTTACATAGCTCGATCTACATTCATCTGATGCATGTCGCCCTCATTATCTGACTAGAATACTCTCTGCAACAGGTTTATGCTGAAGGACAGGAACAAGCCAATCATCTTCTCCATGGCTCGTCTTGACCGTGTCAAGAACTTGACTGGTCTGGTTGAGCTGTATGGTCGCAACCCTCGCCTGCAAGAGCTGGTTAACCTTGTGGTTGTCTGTGGTGACCATGGCAACCCATCTAAGGACAAGGAGGAGCAGGCTGAGTTCAAGAAGATGTTTGACCTTATTGAGCAATACAACTTGAATGGCCACATCCGCTGGATCTCCGCGCAGATGAACCGTGTCCGCAACGGTGAGCTCTACCGTTACATCTGCGACACCAAGGGTGCTTTTGTGCAGGTAACTTAATGATGTTCTCTCATTGCAAAAATATCATGGTTGAATACTTGAATTGTAAATCTAACTGTTCTCAAATTTATCTTGTCTTGCGTTTCCAGCCCGCTTTCTACGAGGCATTCGGTCTCACTGTTGTTGAGTCCATGACCTGTGGTCTCCCGACATTCGCAACCGCCTATGGTGGTCCAGCTGAGATCATCGTGAACGGAGTGTCTGGCTTCCACATTGACCCATACCAGGGTGACAAGGCCTCGGCGCTGCTCGTTGAGTTCTTTGAGAAGTGCCAGGAAGACCCCAGCCACTGGACCAAGATCTCGCAGGGCGGTCTTCAGCGTATCGAGGAGAAGTATGCAAAACACATCCCAGTAATCTGTGTTTCTGAATACGCATTTCGTCTTTCTTGCAGTGCTAACATTATGTTTCTCCAACCTTTGTTTCAGATACACCTGGAAGCTCTACTCTGAGAGGCTGATGACCCTCACCGGCGTCTACGGATTCTGGAAGTACGTCTCGAACCTGGAGAGGCGCGAAACCCGCCGCTACCTTGAGATGCTGTATGCCCTCAAGTACCGCACCATGGCTAGCACCGTCCCGTTGGCCGTCGAGGGCGAGCCGTCGAACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010570

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA010570&oldid=55393"