Os09g0376900

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0376900| Description = Similar to Potassium transporter 13 (AtPOT13) (AtKT5)| Version = NM_001069581.1 GI:115478904 GeneID:4346918| Length ...")
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Gene Name

Os09g0376900

Description

Similar to Potassium transporter 13 (AtPOT13) (AtKT5)

Version

NM_001069581.1 GI:115478904 GeneID:4346918

Length

4700 bp

Definition

Oryza sativa Japonica Group Os09g0376900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13267535..13272234

Sequence Coding Region

13267879..13268924,13269248..13269502,13269601..13269715,13269838..13269890,13270316..13270576
,13270714..13270764,13270874..13271122,13271241..13271469,13271754..13272128

Expression

GEO Profiles:Os09g0376900

Genome Context

<gbrowseImage1> name=NC_008402:13267535..13272234 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13267535..13272234 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgacgacagcgggatccaggaggagcctgcaccgcccccgccacccccgcctcccccgccgccgccgccgccgctgcggaggctcctgacggcgacgcggtcgggtggctcgaggtgggtggacggcagcgaggtcggctcgtccgagtccgcgccgtggtcgctcgacggtgaccgctccctccgcctctccgtcgactccgccgcctccgccggtggcgccagcggaggcggaggcggaggcgggccgctctcgcgtgcgtcctccggcgcgttccggcggcgcttcgggaagcagccgaggcgggtcgactccctcgacgtcgaggccatgtccgtccgcggcgcgcacggccacagcagcaaggagatatcaatgctgagcaccgtggcgatggcgttccagaccctcggagtcgtctacggcgacatgggcacgagccctctctatgtcttcagcgatgtgttcagcaaggtgcccataaagtccgaggtcgagattcttggagcgctttctctggtcatgtacaccatcgcgttgatccctttcgcaaagtatgtctttatagttctgaaagctaatgacaacggagaaggaggcactttcgcgctgtactcactgatctgcaggtatgcaaaagttagtctgcttccgaatcagcaacgtgtggatgaggatatttctagctttaggcttaagttgcctacccctgagcttgagcgagctctatctgtcaaagaatcccttgaaaagaatccagtcttcaaaaacattcttttgttcttggttctgatgggaacttctatggtaatcggggatggcattctcactccatcgatgtcagttatgtctgctgtcagtggtctgcaaggtcgagttcctggatttgggacagatgctgttgtaatcgtttcgatcctgtttcttgtactattgttcagcgtacagaggtttggaactgggaaagttggtttcatgtttgctcctattttggcactgtggtttattaatttgggaaccattggaatttacaacttggctaaatatgatatatctgttgtgagagcattcaatccagtgtatatctatttatttttccagacgaatggtataaaggcatggtcagctcttggtggttgtgtcttgtgcatcacaggagctgaagcaatgtttgcagatctggggcatttctctgtgaaatcaatacaggtagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcatatttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccagaaattcttttctggccagtatttgtgattgctacacttgctgctatgattgccagccaagctatgatatcagcaactttctcttgcataaagcaggccatggctcttggttgctttcctagaattaaaataattcatacatccaagaaagtcatgggccagatttacattcctgttatgaattggtttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacgacattgccaatgcttatggtattgctgaagttggagttatgatggttagcactgcactggttacgttggtgatgcttcttatatggcaaaccaatttgttcctcgttatgtgcttccctgttatttttggttctgtggagtttgtttacttaacagccgttctgtcaaagatacaagaaggaggatggttacctctggctttctcatcattgttcctctgcataatgtacacatggaactacggaagtgtgttgaagtaccagagcgagatgcgtgggaagatttccctggactttatccttgacctgggatccacgcttggcacagtaagagttccagggattggtcttgtgtacaatgagctggtccagggaattccgtcgatctttggccatcttttggtcacactcccagcaatgcactctacgattgtcttcgtttgcataaagtatgttcctgtcccatatgtcccatttgaagaaaggttcttgttccgaaggattggccaaaaggactaccatatgttccgttgtgttgcacggtatggttacaaggatgtcaggaaagaggaacatggcttctttgagcagcttttggttgaaaccctggagaaatttttgaggaaggaatcccaggaaatggcacttgaagcaagcgcaatggcagtagagcgtgacgatgtttctgttgtatctgatatcccttcatctcctgttgaggctggggatctacatgttccactgctttctgatcagaggctgggtgatggcacccaaacattcatcaccgaaggcaatacacctgtgcttcccacgagttccatctcagaagaagaccccagcttggagtatgagctggagtcactgagagaagccatagcttctggattcacatacctcttggcacacggtgacgtgagggcgaggaaggaatcgttcttcacgaagaagttcatcatcaattacttctacgcgttcctcaggaggaattgcagggctggaaccgcaaccttgaaggtccctcactcgaacattatgcgtgtcgggatgacatacatggtgtga</cdnaseq>

Protein Sequence

<aaseq>MDDDDSGIQEEPAPPPPPPPPPPPPPPLRRLLTATRSGGSRWVD GSEVGSSESAPWSLDGDRSLRLSVDSAASAGGASGGGGGGGPLSRASSGAFRRRFGKQ PRRVDSLDVEAMSVRGAHGHSSKEISMLSTVAMAFQTLGVVYGDMGTSPLYVFSDVFS KVPIKSEVEILGALSLVMYTIALIPFAKYVFIVLKANDNGEGGTFALYSLICRYAKVS LLPNQQRVDEDISSFRLKLPTPELERALSVKESLEKNPVFKNILLFLVLMGTSMVIGD GILTPSMSVMSAVSGLQGRVPGFGTDAVVIVSILFLVLLFSVQRFGTGKVGFMFAPIL ALWFINLGTIGIYNLAKYDISVVRAFNPVYIYLFFQTNGIKAWSALGGCVLCITGAEA MFADLGHFSVKSIQVAFTAVVFPCLLIAYMGQAAYLMKYPFAVERIFYDSVPEILFWP VFVIATLAAMIASQAMISATFSCIKQAMALGCFPRIKIIHTSKKVMGQIYIPVMNWFL MVMCIIIVATFRSTNDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLVMCFPVIF GSVEFVYLTAVLSKIQEGGWLPLAFSSLFLCIMYTWNYGSVLKYQSEMRGKISLDFIL DLGSTLGTVRVPGIGLVYNELVQGIPSIFGHLLVTLPAMHSTIVFVCIKYVPVPYVPF EERFLFRRIGQKDYHMFRCVARYGYKDVRKEEHGFFEQLLVETLEKFLRKESQEMALE ASAMAVERDDVSVVSDIPSSPVEAGDLHVPLLSDQRLGDGTQTFITEGNTPVLPTSSI SEEDPSLEYELESLREAIASGFTYLLAHGDVRARKESFFTKKFIINYFYAFLRRNCRA GTATLKVPHSNIMRVGMTYMV</aaseq>

Gene Sequence

<dnaseqindica>3311..4356#2733..2987#2520..2634#2345..2397#1659..1919#1471..1521#1113..1361#766..994#107..481#cacacacacacaaacaaacacggagacgcgacgcgacgcgacgcctcgctctcttcctcctcctcttgtctgatccgacgccgtcgccggagcagctgcgggagggatggacgacgacgacagcgggatccaggaggagcctgcaccgcccccgccacccccgcctcccccgccgccgccgccgccgctgcggaggctcctgacggcgacgcggtcgggtggctcgaggtgggtggacggcagcgaggtcggctcgtccgagtccgcgccgtggtcgctcgacggtgaccgctccctccgcctctccgtcgactccgccgcctccgccggtggcgccagcggaggcggaggcggaggcgggccgctctcgcgtgcgtcctccggcgcgttccggcggcgcttcgggaagcagccgaggcgggtcgactccctcgacgtcgaggccatgtccgtccgcggcgcgcacggccacagcagcaaggtgaatccctggaggaaccttgggggggatcatttcactgttggtgaataccttttcgcagagtgattatattgaccatttcttgattagatagggaggatcacgcctgatgggattgatcaccgaatgtttattttgattagtaaatgttttgatttcgtttggaatctgggaaacattttgctatatctgaatggtagtattgcaaggatcaatgggacctctgaacctgatgatgtgattgactcactcctcttgattggctgctgcaacctgaaccacaggagatatcaatgctgagcaccgtggcgatggcgttccagaccctcggagtcgtctacggcgacatgggcacgagccctctctatgtcttcagcgatgtgttcagcaaggtgcccataaagtccgaggtcgagattcttggagcgctttctctggtcatgtacaccatcgcgttgatccctttcgcaaagtatgtctttatagttctgaaagctaatgacaacggagaaggtatagctctgtgccattttgacatcagatatgtagagccaatcatgtgaactgcctgtcggtttggtgttctctgaatttgttggcttactgattgtgttgttacatgatttttcaggaggcactttcgcgctgtactcactgatctgcaggtatgcaaaagttagtctgcttccgaatcagcaacgtgtggatgaggatatttctagctttaggcttaagttgcctacccctgagcttgagcgagctctatctgtcaaagaatcccttgaaaagaatccagtcttcaaaaacattcttttgttcttggttctgatgggaacttctatggtaatcggggatggcattctcactccatcgatgtcaggtgcttcacgaacaaaaatgtttcctgactgtagtaacagagattctgctatctccacccacatttttcttaattgttgatccaaccattcttttttacttttgttcagttatgtctgctgtcagtggtctgcaaggtcgagttcctggatttgggacaggtttgatgttctgtatgccttgctaaatatcaccgattgaaatttgcttatatgatacatcattaactcattacggaagcatttaactgatgttttatatactttctgaggttacaagacgtgttttttctacgcagatgctgttgtaatcgtttcgatcctgtttcttgtactattgttcagcgtacagaggtttggaactgggaaagttggtttcatgtttgctcctattttggcactgtggtttattaatttgggaaccattggaatttacaacttggctaaatatgatatatctgttgtgagagcattcaatccagtgtatatctatttatttttccagacgaatggtataaaggcatggtcagctcttggtggttgtgtcttgtgcatcacaggtaaatccttactcaagcagcaatattatcagtttaggttgtcttttcatgtttaatgacaaaagtgacaactgccaaattttacatccacactaattgttgtcctcaagagtcagtagtttacaactcagatacttagtagtaccaagactctacaaaggagtatcatgatggatgaaaatatcccttctgaattaatgtgcagctatctctgtttatgatttgattttggatgaatgcatcctgaaccatatttcctgtcactcattcaatatttctgaatcgatcctgccagttatgtgtaattactccaaaagtctgaaataccatttttcttgagtgaatcattgaacactaacactgagtgattgtgctgcattccagaaatattttattgcactcatttgccttttttttaattgtaggagctgaagcaatgtttgcagatctggggcatttctctgtgaaatcaatacaggttaacacattaacaagatcaacaattgagtcatttttttctgatactctgtgtgttttgtgtgatacttgccaatcttttttaatcaagacataaattttgttatcttttgcttgttctaggtagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcatatttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccaggtaaaaattccatctgggctggtcattgttattatcactcttaacaattgtcttttcctgttccattgtgtaactcaagttttctgtctgcaatgcagaaattcttttctggccagtatttgtgattgctacacttgctgctatgattgccagccaagctatgatatcagcaactttctcttgcataaagcaggccatggctcttggttgctttcctagaattaaaataattcatacatccaagaaagtcatgggccagatttacattcctgttatgaattggtttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacgacattgccaatgcttatggtcagtaatttggtctcaggggattattcaatacatatatttttttaattgaatgcagtttatcataagcagtcatcttggcaaatgatccctcccaaaatttccaccctcaaacttgctatattataacatccataatcaatttataaaaagtactgttgcaattgtgaccaacctttggaaatggttacaatgcactgatgaacaacttccattccgttctgcaatgtcaaatacttgtagtgtgttgcaatgctagcatctattattttcctcggcaactgtctcattattgctgatactgattttcaaaatattttcaggtattgctgaagttggagttatgatggttagcactgcactggttacgttggtgatgcttcttatatggcaaaccaatttgttcctcgttatgtgcttccctgttatttttggttctgtggagtttgtttacttaacagccgttctgtcaaagatacaagaaggaggatggttacctctggctttctcatcattgttcctctgcataatgtacacatggaactacggaagtgtgttgaagtaccagagcgagatgcgtgggaagatttccctggactttatccttgacctgggatccacgcttggcacagtaagagttccagggattggtcttgtgtacaatgagctggtccagggaattccgtcgatctttggccatcttttggtcacactcccagcaatgcactctacgattgtcttcgtttgcataaagtatgttcctgtcccatatgtcccatttgaagaaaggttcttgttccgaaggattggccaaaaggactaccatatgttccgttgtgttgcacggtatggttacaaggatgtcaggaaagaggaacatggcttctttgagcagcttttggttgaaaccctggagaaatttttgaggaaggaatcccaggaaatggcacttgaagcaagcgcaatggcagtagagcgtgacgatgtttctgttgtatctgatatcccttcatctcctgttgaggctggggatctacatgttccactgctttctgatcagaggctgggtgatggcacccaaacattcatcaccgaaggcaatacacctgtgcttcccacgagttccatctcagaagaagaccccagcttggagtatgagctggagtcactgagagaagccatagcttctggattcacatacctcttggcacacggtgacgtgagggcgaggaaggaatcgttcttcacgaagaagttcatcatcaattacttctacgcgttcctcaggaggaattgcagggctggaaccgcaaccttgaaggtccctcactcgaacattatgcgtgtcgggatgacatacatggtgtgattggggctttgcaagattatgtgttagtgctgcaagattgttcctttttttttctttctttcttttttaccatgtattggatggaatcgtacaccagctgctagttttaggggctgtactgcagtgatgagcaaaatcactactgctgctggccaactgctcagcattttagtccgcagaattggccttatatgtgctcacttttcagtgaatttgtgccaagttgtttatgtggtattcatggagattgtatttgtagcaagagcaatgcaatctgagttgatctctgccaccctgataagttttataacttcagttctgaatataaattagtgatctttact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0376900, RefSeq:Os09g0376900