BGIOSGA010583

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Revision as of 09:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010583| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010583, complete gene.| tag = OS03G03...")
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Gene Name

BGIOSGA010583

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010583, complete gene.

LocusTag

OS03G0397700

Ensembl Transcript ID

BGIOSGA010583-TA

Ensembl Protein ID

BGIOSGA010583-PA

Length

5516

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17829722..17835237

Sequence Coding Region

17835099..17835237,17833921..17834053,17833749..17833820,17833583..17833651,17833424..17833495
,17833266..17833334,17833101..17833172,17832939..17833004,17832797..17832862
,17832154..17832521,17831749..17832044,17831068..17831339,17830866..17831001
,17830249..17830379,17829963..17830119,17829722..17829865

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17829722..17835237 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17829722..17835237 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGCCGAGCTCGAGCTGGTTCAGAGCAGCTTCAGGCTCGGGCATGGCGTCGGTGGGCTTCACTGGAGTGGTGGCGATGCTGCTCATGGCCACAGCGTTCTTGGGGGTCACTGCCGACACTAGCTCAGACGACGTGACTGCCCTAAACACGTTCTACACAAGTCTGAACTCGCCCTCGCAGCTGACAAACTGGGTGGCGCAGAACGGCGACCCTTGTGGCCAGTCTTGGCTTGGGATCACTTGCTCTGGATCAAGGGTGATAACAATAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTAAATCTTGAGAACAATAGCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTAAATCTTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTACATTGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGACAAGTCTGACCATGCTTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTATCTGATCTCCCTCTAACTGACCTCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCTGATAAGCTAAAAGGCATAAGTAATCTGCAGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTTCTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACGGTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTGGGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTGTGTTCAAGAGAAAGTCAACGAGGCATCAACGTGGAGGAGATCCTGAGAAGAATGAACCTCTCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCAGCTGAGAACAATAAGCATCATATCACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAGCATGGACAGTATTTGCTGGCATATGAATTTTACAGAAACGGTTCTCTTCATGACTTCCTTCACCTGTCTGATGGATACAGCAAACCACTGTCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAATTTCAAGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTATTCCCAACCAGGAACTCCAGGAATCAGATGAGAATTCAGGATATAGAGCTCCCGAGGTGACCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAGAGCTCCTGACTGGCAGGAAAGCATTTGACAGATCCCAACCATGGCCACAGCAGTCGCTAGTCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAGCACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGTCCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACGACTCCGGTGACTACACATTCTAG</cdnaseq>

Protein Sequence

<aaseq>MGKPSSSWFRAASGSGMASVGFTGVVAMLLMATAFLGVTADTSSDDVTALNTFYTSLNSPSQLTNWVAQNGDPCGQSWLGITCSGSRVITIKLPGMGLKGTLGYNMNVMTALVELDASNNNLGGGDIPYNLPPNLERLNLENNSFTGTLPYSISQMASLKYLNLGHNQLSSINVMFNQLTNLATLDLSDNTFSGTLPDSFSNLTSLTMLHLQDNRFTGTIDVLSDLPLTDLNVQNNQLSGAIPDKLKGISNLQISGNSFSNSPVSPAPSSPPSTTSQSPPRQPSTRNPRNRNRNPPIGSNGDNGGNGDGSGGDGGGRSSKIGGGAVAGIVISLVVLGAMVGFFVFKRKSTRHQRGGDPEKNEPLTLRPIASGKFNQLRTISIISPTAKEGLQKTVSMNLKPPSKIDLHKSFDENDLTNKPVLAKNVDLSSIRATAYTVADLQMATESFSADNLIGEGSFGRVYRAEISDESDHKVLAVKKINVSAFPSKPSDFFIDLVAKISKLNHPNLSELDGYCLEHGQYLLAYEFYRNGSLHDFLHLSDGYSKPLSWNSRVKIALGSARALEYMHETCSPSIIHKNFKSSNILLDNELNPHVSDCGFAELIPNQELQESDENSGYRAPEVTMSGQYSQKSDVYSFGVVMLELLTGRKAFDRSQPWPQQSLVRWASPQLHDIDALDQMVDPALEGLYPAKSLSRFADAIALCVQPEPEFRPPMSEVVQSLVRLVQRSSMGSVLSGGESISRRYDDSGDYTF</aaseq>

Gene Sequence

<dnaseqindica>1..139#1185..1317#1418..1489#1587..1655#1743..1814#1904..1972#2066..2137#2234..2299#2376..2441#2717..3084#3194..3489#3899..4170#4237..4372#4859..4989#5119..5275#5373..5516#ATGGGGAAGCCGAGCTCGAGCTGGTTCAGAGCAGCTTCAGGCTCGGGCATGGCGTCGGTGGGCTTCACTGGAGTGGTGGCGATGCTGCTCATGGCCACAGCGTTCTTGGGGGTCACTGCCGACACTAGCTCAGACGACGGTTAGCTCCTCTTAATCTCGCATTTGCGTCCATTTTTCTTCAGCTCGAGCACGGTTTCGGTTTGGTTTCTCAAGAACTCTGCATTTCCAGCTTGTTTTGTTTTGTTCAGTTCAGTTTTCTGTGTTCTTGTTTCAGAAATCAATGGGGGATTTTCTGTTCTTGGTTCTTCCTTTCCTCCCCTTCTGTTTCTTGGTCAGACTTCTTAGAGAAAGAAATGTTTCTTTTGCAGTGGAACCTTTTCTTTTGATGAATCCTATGGAAATTGCTTGTGAATCCACTTAGCCACAAGCAGGAACTTGTAATTATTTAGCTGTTTCTTTCTGTTTGCTGCTTCTTTTGGGACATCTCCATTATACTGTAATTAAGGAGCTTATAATTCTGGTTCTGGGGGGTGATCAGATGCCAGATTTAAGGAGAATTGTTCTGCAAGTTTCTTAAACCAATCAGTCACCATGGTGTTAATTGCTAAGTTGCTGCTGGCATCTTCACTTCCTCAAGCTATTTTCCCTTCTTTTTCTTTTTCTTTTTTTTGACTTTTCTTACTTCAACTGGTCAAATTTTCTCATATTTGGCTTCATCATACTTTGATTGTTTGTGATTTCAAGGTTAAGGCCGATAGCAAATGCCATTAGTTTGGCAGGGTGGCTCCACTTTGTCATCATCATTCTGGTGCCATCGTTTGTCCTGTCCGGATAACCGGGCAGGAAAGATGTGCCTATGCTTCTTTTTATTCATTTCTCCACTCTTCCTTCCATGACTGGCTCCATAATTTTTACATATCAACGCAGCCTTTTCTCATTGGATTGCTAAAAAGTTAGGTTCTCTGTATAGTATGTTTCAGTTTGACTTATAGTTTTAAAAGTGCTGTTTTTTTTTAATGCAAATTTGGGGTTTTGAGATTATGGGAGTTATATACAACTAATATTCTGACTACTTTTCTTAGTACCAAATTATATTAAACTAGGCAACTCTAAACCTTCCATTGTTCCAGCCATGTGTAAGTTCACTTGACAATATCTTTTCTTTTTTTTGGGTTCATGTTCAGTGACTGCCCTAAACACGTTCTACACAAGTCTGAACTCGCCCTCGCAGCTGACAAACTGGGTGGCGCAGAACGGCGACCCTTGTGGCCAGTCTTGGCTTGGGATCACTTGCTCTGGATCAAGGGTGATAACAATGTGAGGTGACACTTAGTGGGCACGCTTCAGGGATGAGACATTTGCTAATTGCCAATTGTTCTGATGTGTTTTCATGTCTTTGTAAATGAACTGTGGGCAGAAAATTACCCGGTATGGGGCTCAAGGGGACCTTGGGGTACAACATGAACGTCATGACTGCACTGGTTGAGCTGTTAGTGAAATCTATTTCAGATGGTTTTTACTACTTACAGTCTTTACTGATGATGGTTGAAAATTTTGACCAAGTTTTTGTTTTTGTTGCTTTGTAGTGATGCTAGCAATAACAATCTTGGAGGAGGTGATATCCCTTATAATCTCCCTCCAAATCTTGAGAGGCTGTAAGTTGTGATTTTGACTGGAAACTGGAAGAACAATTTTGTCCTTGTTTTCATTCTGTTAGTTCTGACAGATAATCTGACTTGCAGAAATCTTGAGAACAATAGCTTCACTGGGACTTTGCCTTACTCCATTTCCCAAATGGCCTCACTGAAGTATCTGTAAGTCACTTTATCGTATCACAATTTGCCACCTTCTCCAAGCCTCTCTGATTGCATCTGACCAAACCATGTCACTCTCCTTGATGTAGAAATCTTGGACATAATCAGCTTTCAAGCATCAATGTTATGTTCAACCAACTCACCAACTTGGCTACATTGTGAGTGTTATTTTATTTTTATATCTAAACAACCATTTTCTTGATACGCTTAATACTGACAAATTATTGGTAAACTGAAACTAATTCTTGTAGGGACCTCTCTGACAACACCTTCTCTGGCACTCTGCCAGACAGCTTCAGCAACTTGACAAGTCTGACCATGCTGTGAGGACATATTTTCATATCCTTTGATATGGATATCTTGTTGAAACAAGCAAACAAAATCTTGTACTACGTAAAATGATATGTTTCCCTCTTCAGTCATTTGCAGGATAATCGGTTTACCGGTACCATAGATGTCCTATCTGATCTCCCTCTAACTGACCTGTAAGTTGGTACACTGTTCACCTACTAATATTCATCTCTTTATCTCCTTGTGATCCAAGACAACTTCCTCTTGCAGCAACGTTCAAAACAATCAATTAAGTGGAGCAATTCCTGATAAGCTAAAAGGCATAAGTAATCTGCAGTAAGTTTTTTTTCGCCACCTTGTCAGTCTATCACAGGGTTCACAACTTTGGAATGAAAAAACAAAAGAAGACCAAATTCCTAATGAAAACATTTCTCAGATTTTCATAGAATTTGATATTCTTAGTTAAATTTAAATAAATTCGGAATTTTGAGCTGGAGAGGCATTGGTACAGACCTGCTGCCGTAAGACCCAAAATTTCAGAAATTCATTCCAAAATTGTGAACCTAGTCTATCACGGTTCCAATATTTATGTGATGGATATTGTAATTCAGGATAAGTGGGAACTCCTTTAGCAACAGTCCAGTCAGTCCTGCACCATCATCTCCACCATCCACTACTTCACAATCCCCGCCACGACAGCCTTCTACCAGAAATCCTCGTAACCGTAACAGAAATCCACCAATTGGAAGCAATGGTGATAACGGTGGCAATGGCGATGGCAGTGGCGGTGACGGTGGAGGCAGAAGTTCTAAGATAGGAGGTGGGGCTGTTGCTGGGATTGTCATATCTTTGGTGGTTCTTGGAGCAATGGTTGGATTCTTTGTGTTCAAGAGAAAGTCAACGAGGCATCAACGTGGAGGAGATCCTGAGAAGAATGAACCTCTCACTCTTAGACCAATTGCTTCAGGAAAATTCAATCGTAAGTTAGCTGGAACCTTGAATCCTAGAACAACTATTCAGCATTACTGTCCTTGAGCTGTTAATTTTGAAGTAATTTCTGAATTCTAAACAAATTTCTTGATGTTCAGAGCTGAGAACAATAAGCATCATATCACCAACTGCAAAGGAAGGATTGCAGAAGACTGTCTCAATGAACCTGAAACCGCCATCGAAAATCGATTTGCACAAGTCCTTTGACGAAAATGATCTCACAAACAAGCCTGTTTTGGCAAAGAATGTAGACCTTTCTTCCATCAGAGCAACTGCGTACACTGTGGCAGACCTGCAGATGGCAACGGAGAGCTTCAGTGCTGACAATCTTATCGGTGAAGGCTCTTTTGGCCGGGTTTACAGAGCAGAGATCTCAGATGAGTCAGATCATAAGGTTTGTCACTGTAAGCTGTGATATTTTCTTATATTTTGTTTCCAAATGCAAAAACGCATCATCTGCAAAAGTACATTCAGTTCATTCTATGGATGTCAAGATCAACTGTTCTTTAATCCTTTTATTTTTATTTTTATTGGAAAGGATAATCCTTTTACTTCTATAGTATCTCCTTTTACTTTTACAGTAATTAGTAAGAAAATAGCTGCATATACAATAATAATCGAACACCTTAAGCTCATATAGGCTGTAGTAGCATAGTCATATTGGTAGTTTCATTCCTGTATGTCAAAATCTATAATCTACTCGTATGGAGGACAGGAACTTCAAACAACACTTCATTGCAAATGCTATGATTATATTTTTTAATTTTCATCATTTTATATTCATGTCAATTTCTACTTTCCAGGTACTGGCTGTGAAGAAAATCAATGTATCTGCCTTTCCAAGCAAACCATCCGATTTCTTTATTGATTTGGTAGCAAAGATTTCAAAATTAAACCATCCAAACCTCTCAGAGCTTGACGGCTACTGCTTGGAGCATGGACAGTATTTGCTGGCATATGAATTTTACAGAAACGGTTCTCTTCATGACTTCCTTCACCTGTCTGATGGATACAGCAAACCACTGTCTTGGAATAGCCGTGTCAAGATTGCATTAGGATCTGCAAGGGCATTAGAGTAAGTGAGAAAGATTCATCAACTGGTACATTTGTTCTGTAACTGAATATGTATTTTTCTTTTCAGGTATATGCACGAAACTTGCTCACCGTCTATCATCCACAAGAATTTCAAGTCATCTAACATACTGTTGGATAATGAGCTTAACCCCCATGTTTCAGATTGTGGGTTTGCAGAGCTTATTCCCAACCAGGAACTCCAGGTGATAGTGCTGAACAATGTACCATTTGATATTTGATAGCCTGCTCTGTCCACTTACAAGTTACAACTTTACAGACTGCATGCTCTGAACCTTAAGAAACACTAACATAGTTTTTTGTGAATTGGAGGATATCTTGAGGTCATCTGAAGTAACAATAACATATTAAGATCTTCCTCAAGTGTTCTGCTAATTTAGAAATGATCCTATTATGTATGATAATTATGGTTATGGAACATAGCTGCAGTACATAGAGCACCTAGTCAATCAGAAGTTCAGAACATAGTTTCTAGCAGTCTGATATGAACGCCTTCAGAGCTGGATATTTTTGTTCTTTTTAACTTCAAGCATCATCTGTGTATTTCTTTTATTTTACTTTGTGCAATCTGAAGTGAGCCGTACAGATGTTAACAAAAAACTTTCTGAAAAAGCAACCTTCATATGATATAATTTTTCTCCTCATAAATCCTTATATAATGGAAACTTCAGGAATCAGATGAGAATTCAGGATATAGAGCTCCCGAGGTGACCATGTCTGGACAGTACTCTCAAAAGAGTGATGTGTACAGTTTTGGAGTCGTCATGCTAGAGCTCCTGACTGGCAGGAAAGCATTTGACAGGTGAAAAGTCAGCTGTCCATACCAACATTTCCCTTGAATCTACACTCAAATTCCTCTGAAATGACTGAATTGAGAAGACAATGAGTCCTTACAGTAACAGAAACCAATTGTTGTCTGAAACTATTGCAGATCCCAACCATGGCCACAGCAGTCGCTAGTCCGATGGGCTTCTCCGCAGCTTCATGACATCGATGCGTTAGATCAGATGGTAGATCCAGCACTGGAAGGACTGTACCCTGCAAAATCCCTCTCTCGATTCGCCGACGCAATCGCGCTCTGTGTCCAGGTATAAATACTACCACCATTGTAGCAATTCTATTCTCCTTCCTTCCCCAATCTCACTGCACTGTTGCTAATCTCTGATCATCTCCAACTTTCAACAGCCTGAGCCGGAATTCAGGCCACCGATGTCGGAGGTCGTCCAGTCCTTAGTCCGGCTCGTGCAGAGGTCAAGCATGGGGTCAGTCCTCAGTGGTGGCGAGAGCATTTCGCGACGATACGACGACTCCGGTGACTACACATTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010583