BGIOSGA010598

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Revision as of 09:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010598| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010598, complete gene.| tag = OsI_118...")
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Gene Name

BGIOSGA010598

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010598, complete gene.

LocusTag

OsI_11892

Ensembl Transcript ID

BGIOSGA010598-TA

Ensembl Protein ID

BGIOSGA010598-PA

Length

6208

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17548873..17555080

Sequence Coding Region

17555028..17555080,17554802..17554907,17554140..17554309,17553928..17554025,17553384..17553674
,17550587..17550660,17550169..17550505,17549478..17549555,17549281..17549403
,17548873..17549201

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17548873..17555080 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17548873..17555080 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGTCCGATGTGTCGTGGCTGGACGGCAACGCCGTCGACGACGTCAACAAGATGGCAGGGAAGGTGAAGGAGCAAACCGCGGCGGGGCAGTTCGCCACCTCGCTGCAGACATTCACGGACCTTCTGTACCTGATCGACTCCAAGAGTGATAGCGTCAACATGTTCAACTACATGACTGGCACCGGCATGGGCATGATGCTAATAACGGGCGACAACACACCGGAAGCTCGCTCGTCGCCATTGACGAGGTATCTCGGCAGGGACATCTCAACGATCATGAACGGCGTCATCAAGCGGAAGCTCAAGATAATCCCCAAGGACCTTGTGTGGCAACAGTGGTCGCTTGATGTTTACGAGGCGATGAAAAACGATTTCATGAGGCCAGCCATCAACGTGGTAAGGGAACAGATATCTCTAATGAAATGGCGGGGCAGCGGGAGCGAAGCGCAACCGCGGATTGGCGGCGCGGGGCCGATCCCGGAGCGGTGCCGCACGCTGGAGAAGCGGTACCGCGACGGTACCGCACATTGGGCGTGCGGTACCGAGGCGCACGCGCGTAACTGCCGTGCGGCACCGGGGTGGATTGCGGGACCGGGAGTGCGGCACCGGCGGATTGCGGGACCAACTCGGTCCCGCACGTTGGCTGTGCGGTACCGTTGCAGTCCCAGAACTATAAAATTCAGTGCTCAGAATTGCAAGAATTGGAAGGTTGCAGATGCAGATATTCCTGAAATGGCCGACGTGCACACGCTGTACCCTATGCAGTCAGCGCCAGTTACCCACCTGACGGGTGATATTGCGGAGGAACTATATGCTGAAACAACATCACTGTGGGAGAAGCTGCGTGACAACATAGCTGGGTCCCATGAGGATATGATGTCTGCTCTAGACCGAATGCGCCAGAAATGCAAACGTATTATGCGCGCGGCATCGTGCAGGCATGCATCAGACGTGCACCGTCCCACAGCACACAGGTTCGCGGACCCCCTTCCGGAACGACCGTCTACCTCCTCCAGGCCTTCCACTTCTAGGCCGTCCACATCGGCACGACCCTCAACATCCACGCGTCCTAGGCCGGCGGTAAGGCCTGTACAACCATCTACGATAATTGGACCGCACAACGAAGGTATACCTCAAGTTAACATGCCCATGTTTTCGACGGGTACAAACGATCTGTGGCAAGGAGCTCAGACATACAACACTGGGGGGATATACCAAATGTCCATAAATGAAGATACACAACCACAAGGAGCAAGCTTTCTGGATATGTTAGGCCATGGAGATTGGTTGTTCAGTCAACCACCTATCATGCAACCACAAACAACAGGAATGTACAACCCCGAACAAAGGATGGAATATGCTGGCAGCACACAATCCTACGGAGAACCATGCAGCTACGGTGGGGGGTCGTCCACAGCACATCACGAGATAGGACCGTCACAACTTGACGAACCGCCACCAATAACTCAGCCAACCCAAGACTACAGCCACCTTGATTTCAGCCGTGTTGATGAGGTCCGTAGGTCTGTCCGTGAAAGACATTCACCTGAAAGATTATCTTTGTCAGGACGCAGACCTCCAACTGGTGCTAGAAGAAAGGGAAAGAAACAGGTCACTAGCACCTCACGAAATTTCGATGATGAGCCTAATGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MLSDVSWLDGNAVDDVNKMAGKVKEQTAAGQFATSLQTFTDLLYLIDSKSDSVNMFNYMTGTGMGMMLITGDNTPEARSSPLTRYLGRDISTIMNGVIKRKLKIIPKDLVWQQWSLDVYEAMKNDFMRPAINVVREQISLMKWRGSGSEAQPRIGGAGPIPERCRTLEKRYRDGTAHWACGTEAHARNCRAAPGWIAGPGVRHRRIAGPTRSRTLAVRYRCSPRTIKFSAQNCKNWKVADADIPEMADVHTLYPMQSAPVTHLTGDIAEELYAETTSLWEKLRDNIAGSHEDMMSALDRMRQKCKRIMRAASCRHASDVHRPTAHRFADPLPERPSTSSRPSTSRPSTSARPSTSTRPRPAVRPVQPSTIIGPHNEGIPQVNMPMFSTGTNDLWQGAQTYNTGGIYQMSINEDTQPQGASFLDMLGHGDWLFSQPPIMQPQTTGMYNPEQRMEYAGSTQSYGEPCSYGGGSSTAHHEIGPSQLDEPPPITQPTQDYSHLDFSRVDEVRRSVRERHSPERLSLSGRRPPTGARRKGKKQVTSTSRNFDDEPNE</aaseq>

Gene Sequence

<dnaseqindica>1..53#174..279#772..941#1056..1153#1407..1697#4421..4494#4576..4912#5526..5603#5678..5800#5880..6208#ATGTTGTCCGATGTGTCGTGGCTGGACGGCAACGCCGTCGACGACGTCAACAAGTAAGTTAATTACCGCTAGCTAATTAATCTCTCGAAATACATTGGCTCCTGGCTGGCTCTGAGTAAACCGAGCATTTGGATATCTCTAATCACATGCATGCTCCTTCACCTTGATCTCAGGATGGCAGGGAAGGTGAAGGAGCAAACCGCGGCGGGGCAGTTCGCCACCTCGCTGCAGACATTCACGGACCTTCTGTACCTGATCGACTCCAAGAGTGATAGCGTCGTAAGTGTACTACAACCATTATTTAACTTATTAATTAAACGCTTTTATTTCTAGTATCCACATCTCCCTTTGCTGTCGTGCGCATTACAGTAATACAAGCAACGGAAGTGGCAATGAATTACCGCAATGCAAACTGTAGGTCATGTTCTTTTCTCCAACAAGAGTTAGATGAAAATTAAGATTTTCGTGGCACGCTTTTCAAACAGCTAAACGGTGCGTTTAATGCGAAAACTTTCTATATGAAAGTTGCTATAAAATATCATATCAATCTACTTTTCAAGTTTGTAATAATTAAAACTCAATCAATCATACGTTAATACCATCTCGTTTTGCGTAAAAAAAACTTTATCTTCATCTTGAGAAGAAAAGAACACCACCGCAGTAGTGTGAGTTTATATTTGTACAGGGATAGATGTTGCAGAGATTGTGCTTGCAACTGGAGTAGCTAGCACCAACAGTAGTCACTCACACACACTGGCTTCTGGTTTGCAGAACATGTTCAACTACATGACTGGCACCGGCATGGGCATGATGCTAATAACGGGCGACAACACACCGGAAGCTCGCTCGTCGCCATTGACGAGGTATCTCGGCAGGGACATCTCAACGATCATGAACGGCGTCATCAAGCGGAAGCTCAAGATAATCCCCAAGGACCTTGTGTGAGTTACCTAGCTAGCTGCTAGCATCTGTTTTGCACATGTCAAAATCGTATTCATTCTGCTCGCTGCTGTGATTCAATTCCAACATAACTTTGTGCATATTCTGAACTTCAGGTGGCAACAGTGGTCGCTTGATGTTTACGAGGCGATGAAAAACGATTTCATGAGGCCAGCCATCAACGTGGTAAGGGAACAGATATCTCTAATGAAATGTACTCCATCCGTACTCATAAAGAAAGTTGTTTACGACCATGTTTAATTCAAACCTTAAGAATATAAATCATAAATAACTCTCAAGTTGTTGAGTCTGGAAATGTAAAAATTATATGAATAGATTTGTCTTGAAAAATACTTTCATAAAAGTGTACATATATGAAAAAAATTTGAAAATATACCTATTTTTTCCCTAATTCGCGTTTATATACCTGCATGGCAACTAATTGCGAAATTATACCTAATCCGCAGGGCGGGGCAGCGGGAGCGAAGCGCAACCGCGGATTGGCGGCGCGGGGCCGATCCCGGAGCGGTGCCGCACGCTGGAGAAGCGGTACCGCGACGGTACCGCACATTGGGCGTGCGGTACCGAGGCGCACGCGCGTAACTGCCGTGCGGCACCGGGGTGGATTGCGGGACCGGGAGTGCGGCACCGGCGGATTGCGGGACCAACTCGGTCCCGCACGTTGGCTGTGCGGTACCGTTGCAGTCCCAGAACTATAAAATTCAGTGCTCAGAATTGCAAGAATTGGAAGGTTGCAGGTCTTCGCAAAATTCAGTGAGCAGAATTGGAAGACGTCAGTGTGTCAGGGGCGGTCGCGCGCTGGTTCCGCGGAACCGTGGCGGTCGCGCACAACCAGTGTGCGGGACCGTGCCAGTCGTGGCGGTCGCGCACAACTAGTGTGCGGGACCGTGCTCCCGTCTGTGCCGGTCGCGCACACTGGTTGTGCGGGACCGTGCTACCATCTGGCGCTTCCATTCCATCGCATGCTACACTTTTCATGCTGATAAAAGTAGACAAAATAGGAATGCGCGCCTTCAATCAATACAGTGAAAACGTCAATCATGTCTTTTTTTTTTACTTAGCTAACAACATAAAATAAGAGGAGGGTGAGAGGAAGCGATGCACCTCACACAATAGCTGCCCAAAAGAGAGGAGACGCTCGTACTGCAGAAGAGAGCAGCATTGTGAGAGAGAGGAGAGCTAGAGAAAAGATTTCGGGGAGCTTGCAGCAGCAATCGAAGAAATAGAGGTAAATTAGTAATGTAAATATTATAAAGTAGAAGTTTAGTGATGGTTTATGTATTAGATATAATTATTAGTGTATTGGAGAGGTAATAATTTAGATAGGGTGCAGGTTAATTTTCTGGAAATCTCGATGAACTAAAATACTATATGGAATTATCGTGAAATTTTCGAAGCTATATTGGTGATTTTGAAAGTGTAATAATAATTTCAGCAAAATGAAAAGGTTTAATAACGGCCATCAAAACGCTTCACATACAAAATGAAAATGACATAATCCCTATTTTCATTTGTGAGTATAGTTCTCATCAACCTCGTACTACGTGCTATATTTCACAGATGTTCATTTTTTGTAATGCTTATATGTACTGATTAATCTCGAAAATTTAAGGTATGGCGGACGATTGGCCTTACCCGTTACTCAGTAGAGACATCGATGCACGGCACCGTGCACGACAGATGTCTTCCAGCCGTCCAAGTGGTCTGTCGGTCTTCATAACACGGACTTGCCCAATGTGGGGGGTCGACGAACGTTGGGTACCAAGGTAACTAATTTTTTTACAGACTTACATGTAATATTTTTTTTAGTTAAATTAGTGTTAGTTTTTTCTAACCCAACAATTGTCGTTTTGCAAGATTGTCCGCCGCAGGCCTTCTTCCTTTTGTTAGAATGTTGCAGGCTCGAGGGCATTATGACTACATGGTAGCAAGACAACAAAGTGCACGCCGACGGAGAGGTAATGCAGGGGAAGGTGATGACGAGGAAGAAGAAGATGTGGTGGGAAGAGACACACGGCACCAGATTATAGACAAAGGACTTCTAACTGCATTGGTTGACAGATGGCGGCCGGAGACTCACACATTCCATCTCCCGTGTGGAGAGATGGCAATTACACTGCAAGATGTATCCATGCTTACAGGGCTGCCACTTGCAGGATAGGCAATTGTCCTCCCTGACCCACCAGTGGATTGGAGGGATGATATCATTGGAAGATATGCTTGCATTGTTCCAGAGGATGATAGCGACATAAAAGGTTTTTTCTCTGAAGATGAGGCGCGCGGCCCTATGTTACACTGGCTTAGCCAGTTCGAGGTAAAACTAATTCGACCATACAACTTCTCAGTGATGACACTATGTTTTGTTAATAAACTTTTCAATGTGCCTTTGTAGGTTGGTTACATGAGAGACCACACGGAAAATTACCATGTGGAATTGCATTTGGAGGCGTCCCTTCTATGGCTTTTTGGATGGGTTATGTTCACAAGTGGACACGGAAACACAGTGGATGCAAGAATGATTAACTTAGCAAGGTTTATTGCGCAGGGCAACATACAAAGTTTTCCCCAGTGGAGTTGGGGATCAGCAGTTTTGGCTGCAACTTACCGAGGTCTTTGTGAAGCATGCACAAAGACAAGCTTTAAGCAGCCTGTGTTTACTGGTTGTCCGTTGTTGGTCATGCTATGGTCGTATGAACGCTTGCCATTGGGACGACCGTACATGACTGCACCTGTGGCTGATTCGTCCTTATTTGGTAACAGTACAGATGATAGGCCTACTTATGGCATGCGTTGGTGCTGGGGACCGGTACGTTTTTTTTTTTTCACATTTGCATTTTATTTCGTACATATGTAATCTTACTATTTATTTCATAACATACAGCCACAGTGGGCGAACGTTCAGGTTCGAAGTGCATACGAGTACTTCATTGAAGCGTTTGATCTACTTAAGGAGGATAACGTTCAGTGGTGTCCGTACACCGACGAGGAGACACAACGCCGTGCCCCTAACAGCCTCAGTACACTCTGCTTGCGTGACTCGTCTTACTGGCTGACGAAAAAGATGCTTGTGTACGATATAGCAGTTGAGACGTACAGTCCGCAACGTGTAATGAGGCAATTTGGCCTATACCAGGAAGTGCCAGTCCCGCCCGGTGAAACGGTCCCCCCCCCCCAAGATACACTTGTAAGTTATATTTAAATGCAATCCCATTAATTTACGTGTGTCCGAATTATATTACTTACCTCAACACCTAATGATGAGTTTTTTGCAGGCAAAAGAGGAAGGGAGATGCTAGCGTGCGGCGAAATTTTTTTGCTAAGATGACACCTTGGGTTGAACAATGGTCGAGGGCAGCACTCGACATTGTTAACGAATCCAGACCGTACGACCGTCGTACGTACGCGCTGTACATGCGGTGGTACACCGCACAAACACGCGTACGACTTGTGACAATAGCAGATGCAGATATTCCTGAAATGGCCGACGTGCACACGCTGTACCCTATGCAGTCAGCGCCAGTTACCCACCTGACGGTAACGAACCTTAACTAGTATTTTTAATGGAAACAATAATCTCACCAAAACATGTTTTGATCATAACGTTTATTTGCGTAGGGTGATATTGCGGAGGAACTATATGCTGAAACAACATCACTGTGGGAGAAGCTGCGTGACAACATAGCTGGGTCCCATGAGGATATGATGTCTGCTCTAGACCGAATGCGCCAGAAATGCAAACGTATTATGCGCGCGGCATCGTGCAGGCATGCATCAGACGTGCACCGTCCCACAGCACACAGGTTCGCGGACCCCCTTCCGGAACGACCGTCTACCTCCTCCAGGCCTTCCACTTCTAGGCCGTCCACATCGGCACGACCCTCAACATCCACGCGTCCTAGGCCGGCGGTAAGGCCTGTACAACCATCTACGATAATTGGACCGCACAACGAAGGTAAAACTAATTATGATACAAATATTTTTGAAGCATACTATTTGTTAAGTCGTAGTAAATAAATGAATAATTACAGGTAGCACGCAAATGGTAAGGCCTACACCAGTAACAACAGGAGGGAGTCAGTGGCATCAAGGGTTCACATCGGTACCGGGTAAAACTCTTTTACAAAATCTGGTCTTATTTTCAATCATTATATGTTGTGCTATTTTCAATTATTTAGCTCTTTTAAGCACAAGTGGCCTAACTTGTACTGAATAGAGTGTTCAACCCAATGCTAATTTCATGTAAGAACTTATAAGTACTAGACACTATTTTTATGGACTAATTTATGGTACGAAGTACAGCGGTGATCCCTTCTAATTTTATTGCCTAATTTATTGTAGGAAGTACAGCGGTGATCCCTTCTATTCCGCATGCAAGTACCATAGGTCAATGGTAGGGAGGGTTTGCACCGTACGCAGGATCCAGCCAACTGGTTCCCCCCATGCGTACAGAAGCTGGAAGCTCACAGTTCCAAGGAGGGTTTTCTGGTAGTCCAATAAACGCACACGGTAATGTTCATCATTTTGTAATATAGTGAGTCATGCACATTTTTTGCTTCCTTTTTCAGGTATACCTCAAGTTAACATGCCCATGTTTTCGACGGGTACAAACGATCTGTGGCAAGGAGCTCAGACATACAACACTGGTTCGTACATACTGTTTTTTTAATTTATCGAGCGTTATATATATTGTGATATTACTGTTGCGCTGCACCTGAAGGGGGGATATACCAAATGTCCATAAATGAAGATACACAACCACAAGGAGCAAGCTTTCTGGATATGTTAGGCCATGGAGATTGGTTGTTCAGTCAACCACCTATCATGCAACCACAAACAACAGGTACCATTTATAATTGAGTAAAAAATATATTATTTCCAGTATCTGCGTACGCTACAAATTTGCATTCAATGTTTTGTAGGAATGTACAACCCCGAACAAAGGATGGAATATGCTGGCAGCACACAATCCTACGGAGAACCATGCAGCTACGGTGGGGGGTCGTCCACAGCACATCACGAGATAGGACCGTCACAACTTGACGAACCGCCACCAATAACTCAGCCAACCCAAGACTACAGCCACCTTGATTTCAGCCGTGTTGATGAGGTCCGTAGGTCTGTCCGTGAAAGACATTCACCTGAAAGATTATCTTTGTCAGGACGCAGACCTCCAACTGGTGCTAGAAGAAAGGGAAAGAAACAGGTCACTAGCACCTCACGAAATTTCGATGATGAGCCTAATGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010598