BGIOSGA010602

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Revision as of 09:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010602, complete gene.| tag = OsI_118...")
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Gene Name

BGIOSGA010602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010602, complete gene.

LocusTag

OsI_11885

Ensembl Transcript ID

BGIOSGA010602-TA

Ensembl Protein ID

BGIOSGA010602-PA

Length

7714

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17486857..17494570

Sequence Coding Region

17494232..17494570,17493725..17493817,17493474..17493572,17493152..17493353,17492913..17493040
,17492752..17492827,17487363..17487637,17486857..17487066

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17486857..17494570 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17486857..17494570 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTTCCTCTGCCGCCGCCGCAGCAGCGCTGCACCGGCGGAGTCCTTCTCCCTGCTGTGCGAGGAGGACAGCGAGAGCGTCTTCGGCAGCGACGACGACGGTGTGGAGGAGACAGCGACGATGGCGCCGGAGTTGGGGAAGATGATGAGCCTTGGCTTCTCTGCGTCTCACCATCTTGGGGATGGTGGTGGTGGTGGTGAGGAGCTCGTTGGATCTTTCATGGAGAAAGAGGTGGAGCAGATGGTTGAGACTGCGAGAGGAGAGTACCTGACGAAGCTGAGCAATGGAGGCATAGAGCTCTCCTGCAGGATTGCTGCCATTGATTGGATTTGCAAGGTTCAGGCTTACTACAGTTTTGGACCATTGTGTGCTTACCTTGCTGTCAACTATCTGGATAGGTTCCTCTCCTCGGTAGAGTTCTCAGTAACAAATGACATGCCCTGGATGCAGCAGCTGCTGATAGTTGCTTGCCTATCTCTTGCTGCCAAGATGGAGGAGACTGCAGCTCCCGGCACTCTAGACCTTCAGGTTTGCAATCCAGAATACGTATTCGACAAAGAGACTATCCATAGGATGGAGATCATTGTGCTAACCACTCTGAAATGGAGAATGCAAGCTGTGACCCCTTTCACTTACATTGGTCACTTCTTGGACAAGATCAATGAGGGAAATCGGATAACCAGTGAACTGATATCTCGATGCACCGAGATCATACTCAGCACCATGAAAGCAACTGTGTTCCTGAGATTCAGACCTTCTGAGATTGCCACAGCTGTAGCTCTATCTGTAGTTGCTGACGGAGGCCGCGTTCTTGACTTTGGCGGTGTTCTTGAATCTTCTAAACTCCCTGTAGATAAGGACAATGTGGGGAGATGCCATCAAGCAATGCAAGAGATGGCATTGGTGATGCAAAACAGCACTGCAAGTCCATCTGGTCAATCCCTTGGTCGTCCTAGCACTTTCAATCAGCCAATCAGGGGATCATACTCTGAATCAGCCAAAAATCAGAGTCTCATCCCTCCACAAATCTGCTCCCCACGTGTTCATCTACCTAGCGACTCGCAAGATCTGAACCGCGCCGTGGTGGCTGCAATGGAGTGGCAGCGTAGTGGCGATAGGCAGCAACAGCCAGAAAGGAGAAGCGAGGGTGTAGGACCGGAGCGGCGGTGGTCAGCGGTGGCACGCGATGGTGGTGGAGGAGGCACGCCGGCGACCGCCGTCGTCGAGCCTCCACGGTCGTTGTCGCCGAGACCCCCGCAGTCGCCAAGCCGAGTCCCCGCGGCCGCGGTCGTCGTCGCCGTCGCCGAGCCCGCCGCGGCCGCCATCATCGAGCCCGCTGCGGTCGCCGTCGACGTCGCTGAGCTCGCCGCGGCCACGGTCGCTGTCGTCGAGCCCGCCGGTGTCTACCGCTGCTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGFLCRRRSSAAPAESFSLLCEEDSESVFGSDDDGVEETATMAPELGKMMSLGFSASHHLGDGGGGGEELVGSFMEKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDKETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQEMALVMQNSTASPSGQSLGRPSTFNQPIRGSYSESAKNQSLIPPQICSPRVHLPSDSQDLNRAVVAAMEWQRSGDRQQQPERRSEGVGPERRWSAVARDGGGGGTPATAVVEPPRSLSPRPPQSPSRVPAAAVVVAVAEPAAAAIIEPAAVAVDVAELAAATVAVVEPAGVYRCS</aaseq>

Gene Sequence

<dnaseqindica>1..339#754..846#999..1097#1218..1419#1531..1658#1744..1819#6934..7208#7505..7714#ATGGGGTTCCTCTGCCGCCGCCGCAGCAGCGCTGCACCGGCGGAGTCCTTCTCCCTGCTGTGCGAGGAGGACAGCGAGAGCGTCTTCGGCAGCGACGACGACGGTGTGGAGGAGACAGCGACGATGGCGCCGGAGTTGGGGAAGATGATGAGCCTTGGCTTCTCTGCGTCTCACCATCTTGGGGATGGTGGTGGTGGTGGTGAGGAGCTCGTTGGATCTTTCATGGAGAAAGAGGTGGAGCAGATGGTTGAGACTGCGAGAGGAGAGTACCTGACGAAGCTGAGCAATGGAGGCATAGAGCTCTCCTGCAGGATTGCTGCCATTGATTGGATTTGCAAGGTGAGCAGAAATCATTCAAACTTTTTTTTGTTCAGGGAATACGCAAGAGATCGATTTGCGCATGTTTGTATCAAGAGATAAGAGTCGATTCAAACAGCCGTGCTAGGCATCGGTCCTCATTTTATTTTGGTTTGTTTCTTTTAGGATCGGTTAGTGCATGCTTTGAGTTGTCCATTATTTTGTCTGGAATTTTTCAGTTGTTGTTGGGTCTGGTCTATTCTACTTATTGCAATCTAGTTCTTAGGTTTGTTTTGGTTTACATCATGTATATTTTTCTCTTTACAACAAACATAAAACAATTTTGTTTGTGTGCGTTAAGTTATAACTGCCAAGATATCATTGACTTTTGCATTATTTGACCAAAGATGCTAATAAGTGAAATGGGCTGCTTGTCTCTATCACCTGCTCATGCAGGTTCAGGCTTACTACAGTTTTGGACCATTGTGTGCTTACCTTGCTGTCAACTATCTGGATAGGTTCCTCTCCTCGGTAGAGTTCTCAGTAACAGTAAGTTCTTCGACTGTACATTGTCCTTTATTTATCAACATGATCATTAGTAAGCATGTACTATTTTTTCTATCATGAGAATAATTATTGCATCAGTGGATGCTAATGTGACAAAATTATGTTGATCCTTTGTTGTGGCAATGTATGTATAGAATGACATGCCCTGGATGCAGCAGCTGCTGATAGTTGCTTGCCTATCTCTTGCTGCCAAGATGGAGGAGACTGCAGCTCCCGGCACTCTAGACCTTCAGGTGAAGAAGAAACAGTAGCATTACATGTGATCAATAATATTAGTTCAGTGGCTGATAAATTAAATTTCAATGTTGCTTGATGACATAAGTTTTTCTTAAATTCTATCATTTGTGTAATAGGTTTGCAATCCAGAATACGTATTCGACAAAGAGACTATCCATAGGATGGAGATCATTGTGCTAACCACTCTGAAATGGAGAATGCAAGCTGTGACCCCTTTCACTTACATTGGTCACTTCTTGGACAAGATCAATGAGGGAAATCGGATAACCAGTGAACTGATATCTCGATGCACCGAGATCATACTCAGCACCATGAAAGGTACCATCGAATTTAATTTCTTTTGATGATAACTTACTCATCTGCATTGCTAGTTCCAGTATCAAGCACCAGCTGATTTGATTGGACTGTCTTGTGCATTTTGATTTGCAGCAACTGTGTTCCTGAGATTCAGACCTTCTGAGATTGCCACAGCTGTAGCTCTATCTGTAGTTGCTGACGGAGGCCGCGTTCTTGACTTTGGCGGTGTTCTTGAATCTTCTAAACTCCCTGTAGATAAGGTGTGGATCCTCTTAGCAGAAGAATCACATCATGTAATTTCCTTTCCATTGTTTTCTGAGAAATGAACCTGCATTTTTTTTGCAGGACAATGTGGGGAGATGCCATCAAGCAATGCAAGAGATGGCATTGGTGATGCAAAACAGCACTGCAAGTCCATCTGGTGTGTTGGACACATCATGTTTCACCTCTAAGAGTGATGATGACAACTCAATCCCAGGAACATCACCACAAGTCGATAACAACAACAACCAGGCCTGTACTCCTGCTTCCAAAAGGGCAAGGGTAGAGGAAGCACCAATGTCATAAGATCACACACATAAGGCATACAGGATTGATATTCTCTTTATCGTTTTGCCGAATTCGGCACTTAGGCATAATTTAAAAAGAAACAATAGGCATGGTAACTAGAAAAGAACCATATTTGTTCTTCAATCCTTTATTCTTTTATGAAAAACAGTAAGAGAGATTCGATACAATTATGCTTTCTCTTTCTTTTAATACAGTCTTCTCCTGCAAAAGTGATATACAGAAAATCAGAGAAAAGTGCATCCATTTGCTTGTTCTTTGACTATATGGAAAATCAGACTCTTGTTTCAAAAAAGAAAGGGGAAAATCAGACTTGGCCTCTATGTGTAACTGTGTTCATCCCATGTATCTCCTCCATCTCATTACCCTTTTTTCCCTTTTACTGAGTTGACTCTTGTCAGGCTTTCCTATGCTTCCATCCATCACTACATGAAAAGGAGAGAGTCAATCTACACATCTGGGGTGTGGCATTGCACATCAAAACAGAAGGATACTGCTTTGCTATACCTGGCCCCATGTTAGTGCTTCTTGAGGTTTTTGTACCATGATAACTATGCATCAATCTGCAAGCAGTGAAGAGCCCATGAAACTCTAACCTTCTAACTGCACACACTGTAGTATGTGCAGAAAGTTCCAACAGTTACAATGCTAGTAGCTAGCTAGTAGCCTCGACGAATCACCTCGTATTGATAGACGCAGCAATCGATGAATCTACCTTACATGCCTCCTGCCACTGAATTTATATCGAGCATATTTCAAATTCAGTCACAGGCAGCACATGGTGAGGCCTTCAGCAATGGAACAGTGCAGCAGGAGTTACTGATGCACATCAGGGTTAACCTTGTACTACCATTTGGTTCAGGAAATATAAACACATCTTGTACTAGGATAGCATAGGATGTGCTACTGCTATCTCCTGAGTCCTGTGATCATGGTCAATGCTCGAGGTCGACACAGAGTCTGCTCTGCTCACACACTGGATCTTGAGAACACGATCTTCAGTAAACAGTAGTAGAGATGAGAATGGTCACAGACATTTCTGATGACGAGAGATGAGAATGGTCACAGACATTTCTGATCGCGTCATTTCTGTATAAGTGATATCATTTCCGACCGTTTCCCTTTTTAATGAGTATAAACTTTGATTTTTTTTCCTTAATTTCTTTAGTGTCGTATTGATGTTGACGCTGGATATTTCACTCCGTCCTAAAATATAGTAACCTACAACTGGATGGTATATCCAGATTCGTTGTGCTAGGATATGACCAATCCAGTACTAGATTGCCATATTTTAAGACGAAGTAAGTACTCCCTCCGTCCCAAAATATAACAACTTGTAGCCCTCAGGATTTGTTCTAAAATATAACAACTTCTTCATCAGCATTCTCTTCCCAACCAATCATAACCCTCCACCATTTACTTTTCCTACTTACCTCCACTACTCATCCAATCACAACTCTCCGCCACTCACTTCTACATACTTTCTTAATAACCGTGTCCAACTCTAAAACTTTTTATATTCTAGGAAGAAAAGAGTAGTTTAAGTCATAAATGTGGTCAATTACCGACCGACCGCACCTTATTTTCGAAGAGATGCTATCGATTTCAGATGTTTTCATCCCTAGACACTATTACAGGTGAGAAGGGGCCTGCAGGAGTGCAGGCTACAGCTATAGCTCCTTTTGCTACAGTATTATCAAGTACAGGGTAACCTTAGTGCAGTCCAGAAAGCTGAGATGGCTCAGTGTCAGTTTGATGATGGCTACCTGACTGAGCTCCATTTCATCTCATGCAGGGGAGTGTGTGTCCCTGCAAAGTGGGCCCAGGTTAGACGTCACTTCATGTTTCTCATGAACTCCTGATATCACCATGCAGGGACCAAAACCTGACCATCCAAATGGAATTGAATACAAACATCAAGAACCCTGAAATTTGGAGGTTCCATTTGTCATAATGGACACAAGTGGCTAGCTACTAGCTAGATTGCCTCTTGAACTTTTCTTTGCTTCCCACGATGTCAAATGAGGTATATACCTCCTTACTACTGGTAATTAATGGCGAGAGGTAAAAAGAAATATAGTGATTGAATTTAATTTATGACTGGTAATGGCGAGACTTTTCATATCTCTGAGAGGCATAGAGAGGTATATATTACCTCCTGACAAACACATATGCTTATAAATCTGCCAAAAAATGAAGAAAATCAAGATAATATGCAAAAATGAGTTTTCCGTCCTATTCAATTCTATGAGATTAGTTCTTTTACCTCTTCCTTCGTAGAGAGGTACTGTATAATTATGAGAATGTATATATCTCTTCAAGTATGGAAGAAAACCTTTGTTCATATGGAGTATATATATAGTCTCCATACATAAACAAACATTATGAAATACTCCACTAGTCTACCTTGTAGCATTCAATTTCTTTAGGCTGTGTTTAGTTTCTGAAATTGGGGAGAAATTTGGGGAAAGTTGGTAGTTTGGAAAAAAAGTCGGGAGTTTATATGAGTAGGAAAGTTTTGGATGTGATGTGATGTGTTGGAAAGTTAGAAGTTTGGGGGAAGTTTGGTGTGAACTAAACATGGCCTTAGTATTGGTGTTCCATATATACTCCCTCCGTCCCATAATATAAGCATGTGTTTGGTTTCGGGACTAGGTGAGATGGGATGAAACCATTTCTGATTTTGGGGTTGGGATGATTCCATTTACGTGTTTGGTTTATAGGATGGGACAATCCCAATTTTTTGTTTGGTTGAAGGGATGAGCTAGAGATGGGATGGGCGCCGTTTGCTATCACCATCAGCGAGAAAGAGGAGAGCGAGCGGAGGTGCGACGATGGCTGGCGGCGAGGAGGAGGAGCGGCGCAATATTGTGAGCAGGCGGACGAACAGAGGAGGAGCACGGACGGGCGAGCAGGGGTGCGGTTGGAGGAGCAGGCCGGCGGCGAGTAGGCAGAGGACGTGGATCCGCCTCCACCGCCCCCCCCCACCACTAGATCCGCCGTCGCCGTCGCTGAGCCCCCCGCAGTCGCTGTCGCTGAGCCCCCGCCGGTCGCCGTCGTCCAGTCCCCCGCGGTCATCGAGCCAAGCCCCCTCACGGCCGCGGTCGCCGTCGCCGAGTCAAGCCCCCCATGGTCGCTACAGCAGAAACAGAATGTAGAGACGGCTTTCTTCTCTTGTAGAGACGGTTTTGCCCGTCTCTAGGTGTACTAGAGACGGCCCTGTGAACCGTCTCTGAGGCGTTGCCATTGCTCCCGTCTCAATAAACAAGAGACGGTTTTGCTAGCCGTGTCTACCAGGTAGAGTCGGTCCATAGAGACAAGAAAAACCGTCTCTACACATATTTTTCATATTTTGTAGAAATATCATAATAAACACACTAGACATGGGTTCAGACCGTCTCTACAGATAAATTTCTTAGATACAGAAACAAACCTCCTCAATTCTAGCATCCACAATTTTATTTGGAGAACATCAGACTGCATCACACTTTAGCATTATAAATAAAAAAACAGGGAGGGACTTGTCGAAAAATCACATATTTCATTCACTGAATGGTAATTTACATCTTACATGAAAAGGTGAACTTCTGGAAAAAAAATGTACAATTTCAGCTACAATATCATAAACAAATACATAACTTGGACTTCTCCATCTAATTGAAGTATACTCTCTATTGCTCCAGATTGATTGAACTGTTATTTCATTAATCATCATCTTCATGCACCCTAAGGTCCTGAGTTCAAATCTCCTATGGAGCGAATTTCAGATTGGGTTGTTTGCGGGGCTAAGTTCCCTACTTCAATGGCCGTATATATCCGGTTGGATGTAGAGGCCGGGTAAAAAATACCCTTCTCTAAAAAAAATAAAAAAAATCATCTTCATGCACCCGTTAATCATCATCTTCACACAAGAACCTGCTATACAATGTAACTTTACAATGTGAAAAAAAATAAATAGTGAAAGTGGACTAGAGTAGAGATTGTGAAGGAAGCTATTGATAAAATATTCTGTCAACAAAATAATGACAAGACTTACCGCGCAAAACAACATGGGATGGACTATGAAACATGTGAATAATAGATCAAGTTAACTCCATGGTTTATCTGAACATCTGAAACTGAAAGTAGATCACTCGATCAGAGTTTGTGAGAGAATCTATGAAAAAAAAATTATGTCATACAAGAAGCATCATGGATGCAAAGGAATATGCCTTTCAATCATCAAGTATATCACGGAGTTTCCAGGTTCAGCTTGTAGTGAAGTCTACAAAAGAAATCGTCTTTTGATCTGCTAAGGAAAAGCAAAAGAATAGTGAAACATGATTAATAATGTCCTGCATTGGATATATAGTGAAACAAAATATATATTGACAACAAGTGCAGAGTTGATATCATTTCTCATGATAAGGCAACATGTAAGTTAGCAATCATATATGCATAATATTTTATTGGAAATTAATCAACCTCACCTTGCTAGTAGTAACATGGAGGTGCTTCAGCAGTAACTGAAGTTCTTGAAAATTGATATTCGCATATGTGTCAAATAGCAGCAAAAGCCGTCCCTCTAGCTAGTCTGCTAACAGAAACCCTGCATTAAGGTAGGAAGCATATGAAAGCAATCAAAGTCAATATATATCTGTGTATATCTGTTGTGCCCTTTTTGAACTTCAGAAATTAAGGGATTCAGTTCATTTTCCAGAAACTAGATTTACATTGAATGCAGTAATGTTGACAACTTTGAACAGCATACCTAACTTTTCAGGAAAGAAAGGTCATTAAGAACAATGGCCTCTAACCACAGTCCCAATGAATGCAAATTAAAACTACCAAAGCACACCAAACTAGATGTTCATCACAAATCGTCCTAAACCAATGTATACCTGTGTGGATTCTCAATAGAAAGGGAGAACAATGAAATTACCTTTTCTTTGATGAAGCTGTGCAACTCGATCTAATTCCTCACGGCAGGTCAATCCCTTGGTCGTCCTAGCACTTTCAATCAGCCAATCAGGGGATCATACTCTGAATCAGCCAAAAATCAGAGTCTCATCCCTCCACAAATCTGCTCCCCACGTGTTCATCTACCTAGCGACTCGCAAGATCTGAACCGCGCCGTGGTGGCTGCAATGGAGTGGCAGCGTAGTGGCGATAGGCAGCAACAGCCAGAAAGGAGAAGCGAGGGTGTAGGACCGGAGCGGCGGTGGTCAGCGGTGGCACGCGATGGTGGTGGAGGAGGCACGCCGGTGATCTGGGGCGGGCGCGCGGCGGCGTGCGACTCCGTCGAGGGTTTCGATAGACCAACGATTGTACCGAGCAGTTCCAAAAATAAATAGTGATTATCCGATTAATTAATAATTTTAAAGGATATTATGATGGTGGGTGCAGTTAAGTGGGGAGGTAGCCATGGTTTATCTCTCCGTCTCTTTTATCCGACTCTAGGTGAGGGGGGATTTCTCGCACATACGTTGGGATAGTTTAGTAGCAACGATTTGATGACCCGTAGTATTTTAGTCGTCTCTAGTTGCCTGTTTTGCTGTAGGCGACCGCCGTCGTCGAGCCTCCACGGTCGTTGTCGCCGAGACCCCCGCAGTCGCCAAGCCGAGTCCCCGCGGCCGCGGTCGTCGTCGCCGTCGCCGAGCCCGCCGCGGCCGCCATCATCGAGCCCGCTGCGGTCGCCGTCGACGTCGCTGAGCTCGCCGCGGCCACGGTCGCTGTCGTCGAGCCCGCCGGTGTCTACCGCTGCTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010602