BGIOSGA010605

From RiceWiki
Revision as of 09:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010605| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010605, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010605

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010605, complete gene.

LocusTag

OS03G0390200

Ensembl Transcript ID

BGIOSGA010605-TA

Ensembl Protein ID

BGIOSGA010605-PA

Length

3906

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17386518..17390423

Sequence Coding Region

17390304..17390423,17389243..17389317,17387852..17387953,17387715..17387768,17387538..17387630
,17387339..17387431,17387131..17387235,17386929..17387027,17386518..17386805

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17386518..17390423 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17386518..17390423 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGGTACGAGGTGATGAGGGACATCGGGTCCGGGAACTTCGGGGTGGCCAAGCTCGTCCGCGACGTCGCCACCAACCACCTCTTCGCCGTCAAGTTCATCGAGAGGGGACTCAAGATTGATGAACATGTTCAAAGGGAGATTATGAACCACCGATCACTGAAGCATCCAAACATAATCCGGTTCAAGGAGGTCGTGCTAACTCCCACACATTTGGCAATAGTTATGGAATATGCTGCTGGTGGTGAGCTATTTGAAAGGATTTGCAACGCAGGGAGATTCAGTGAGGATGAGGCAAGGTTCTTCTTCCAACAGCTGATTTCTGGAGTGAGCTATTGTCATTCTATGCAAGTATGCCATAGAGATTTGAAACTCGAAAATACTCTCTTGGATGGCAGTGTCGCACCTCGGCTTAAGATTTGTGATTTTGGTTACTCCAAGTCTTCTGTCCTGCACTCTCAACCGAAATCAACTGTTGGCACACCGGCTTACATTGCTCCAGAGGTCCTCTCTAGAAAGGAATACGATGGAAAGGTAGCTGATGTTTGGTCATGTGGGGTAACACTCTATGTGATGCTTGTTGGTGCGTATCCTTTTGAGGACCCTGATGACCCAAGGAACTTCCGCAAGACGATCACTAGGATACTCAGTGTACAGTATTCAATTCCAGACTACGTTCGAGTTTCAGCGGACTGCACACATCTCCTGTCCCGGATTTTCGTTGGAAATCCTGAGCAGAGGATAACTATCCCAGAGATCAAGAACCACCCATGGTTCCTGAAGAACCTGCCCATCGAGATGACCGACGAGTACCAGAGGAGCATGCAGCTGGCGGACATGAACACGCCGTCGCAGAGCCTGGAGGAGGTCATGGCGATCATTCAGGAGGCCCGGAAACCGGGCGACGCCATGAAGCTCGCCGGCGCCGGGCAGGTCGCCTGCCTGGGGAGCATGGATCTCGACGACATCGACGATATCGACGACATTGACATCGAGAACAGCGGGGACTTCGTGTGCGCCTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEHVQREIMNHRSLKHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCTHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIENSGDFVCAL</aaseq>

Gene Sequence

<dnaseqindica>1..120#1107..1181#2471..2572#2656..2709#2794..2886#2993..3085#3189..3293#3397..3495#3619..3906#ATGGAGCGGTACGAGGTGATGAGGGACATCGGGTCCGGGAACTTCGGGGTGGCCAAGCTCGTCCGCGACGTCGCCACCAACCACCTCTTCGCCGTCAAGTTCATCGAGAGGGGACTCAAGGTAAAATGAAAGCTTCACCCTCCAAACTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTGTTATGGTATGCACATCGACTGTGCGATCTGTGCTGGCTGTGAGATGTTTGCTCCGTTCGGCCGGGGCTTGTCTGAATTGCTAGTGCAACGCTGCTTGAAATGTTTCCTTCACATTTGGAGTCCTGCAAAAATAGCCGAATTTTCAGCATCCGGGAGAATCGGTTAGCGTTAGTTTTGCAGTAGGATTTTACATTTGTTCCCCCATCTTTTTAGTGCAGTTGATTGGTTGAAGCTTGCGCATTTCTTTCTAGATTACTTTTAGTTGTAACTAATTTGCTTCTAGAGAAGGAATATATCCCAAAATGCTGGTACCTTTTGTTAGGCCAAAAGGAACCCAAGAAAATTGGTCAATCCCTTTGACTATATTTGGTCCCTGACTCTCTAACACGTGACGAACTCTTATCGGTGACATTTGCCTCAAGGAAGCTAGCAGAGCCAAACTGTTCTACGCATAGTGATTTTTTATTTTTATTTTTTTGGCGTGAAGCACTGGCTATGATGACATAAGTTTCAATCAATTTTATTACTTATGTAGCTTGCTGTCTTTTATATTCAAATTTGTAGCTGCTTTTGATGGCCTTTTCTAGCTCACTTTGGCATTTGGTGGATGTTTCTAGCGTTTTCGCTAGCCTTTCATACATGTCACTCGTCATTTATTAGTTCATTAATTGCTCTACTGTTACTGTGTGCTATGCTGTCCGTTTCTTGTTCTTCTTCCTCGTTTACTGTCGAGGTGCTGTCCATTACTATTTCGGGCTGATGATATTTTTGTTGTATTTTTTGTTCTGTTCGAGCTGTTTTTGTTTGTAATATTAATCTCTCTGTAAAAAAAAAAATGGTACTCTAATAAGGGCCTTTGGTATCCATCATTGAGCGTCTTTGGTTCATTGGTTAACTCCACTTTTTTTTTTTTATCGTTGTGTAGATTGATGAACATGTTCAAAGGGAGATTATGAACCACCGATCACTGAAGCATCCAAACATAATCCGGTTCAAGGAGGTAATCTCTTGGGCCTCTAGGGAAGTAATGTGTAATATAATCTCTAGTTGAATTGAGTGTTATGATTGTTTCTGCTCTTTTCGGGAATTTTTTTTTTCTACTGATAGAAAGCGATAGTTATCTGTATTCTTCCACGCCTCTATGTTTATAGGAGGACAGATGGAATATGTAACGTGAAAGTTTAGTTGCACATTTAGGACTCTTTTGATGGTGACTTTTATCCCTTGAATGTCACTGTTTTCACCCCTGTTTTGTTCTTTTTCTGTTTTGAGTTCTCTTTAACTTCGAATATGCTGCTCACTTTAGTGTGTATGATTTGCATGAACCTTGTACTTTGTTTTTCCCACGGGCAGACTAGTAGGCTAATTGCCTAATTGCATAGATTCCTTTTTGAAGGAAAAAAATCAGGGCAGTTTTTTTACACTCTGCATAAATGAAAATAGTAGTTATTTCTAAAATAACAAAAATTAGGAGTTATTATTATAAAAACAAGTTATTTACAAAAGAAAAGGAGAAGTGCATGAAAGCAAAAGTTGCTAATCTGCTATTTTCAGGAAACTAAATGTACTAGTGTCTGGCATTAATTGTTGAGTCATGTTTTTCAGGTTAACTCTGTCTTACTACTGTCTGTGTTCTGTGTAACTCAGGGAAGAACGGCTCCCATCGGTTGCCATTTTACCTAAAATGGCTTATTTGGCTTATTAGAAAATTAAAATTAATTTATAAGTAAAACTTTTGTAGATTTGTTCGTAGCGACTTAAAAGCCAAAATTAACAAAAATTACGTTAAAAGCATTTCAAAATCAACTTCAAAATTAAGTTCAAAAATTCAAATTTTGGCTTATTCTTTGGCTGTTTAGGCCAAACGATGGGGCTGGTTGATTCTTATTTAGATTGACAATGCGTATGTGTCCTTTTATGCTGCCTTTTACTGTATCGACGTTGTTATAAAAAATTCTTTTGTGGGGAGCACGCAAAAGCTTTGCATGGCATTCCATTAGAGAAGAGAGTTGAATACAACAAGTTGGCCCAAGGCCCAAAACAGACCTAGAAAGTCTTAAATTAGGTGCTAAAATTTTCAGGGCTATTTTAGGTTCTTTCGTCATTTTTTCTTCCAAGATCTGTTGAACAGGGTTTTTAGAATAAAGCTATCCTTGTGAATATTGCGAGCACTTTCCGCAGTTCTTTCTCTGCATTCATCGCTGAACACATGTATTTGACTGTTTGACGAGGTTTAACATTCAAACTTGTATTGAGAGTTGAAAAATTAAAGTAGTCCTTAGTTTTCAGGTCGTGCTAACTCCCACACATTTGGCAATAGTTATGGAATATGCTGCTGGTGGTGAGCTATTTGAAAGGATTTGCAACGCAGGGAGATTCAGTGAGGATGAGGTAGAGAATATTCTCCACAATCTTTGGGACTCTTATGCAGATTTATGTCATTGCATTGACAAATTATTCATTATCCTCATCAGGCAAGGTTCTTCTTCCAACAGCTGATTTCTGGAGTGAGCTATTGTCATTCTATGGTACATGATGTCTAGTTGACTTAAAAATATCAACTCTTTTGTAGACTATTGCCCACATTTGTCCTTATCTTTTTCTGCTTGCAGCAAGTATGCCATAGAGATTTGAAACTCGAAAATACTCTCTTGGATGGCAGTGTCGCACCTCGGCTTAAGATTTGTGATTTTGGTTACTCCAAGGTATGATTTATGCAGATACTATCCTCTGACATTCATGTTTTCTGTTGCCTAAAATTAGTACCCACCTGGCCACCCCTCCCTTTGGGCCTTTCTTTTTAATTTTCAGTCTTCTGTCCTGCACTCTCAACCGAAATCAACTGTTGGCACACCGGCTTACATTGCTCCAGAGGTCCTCTCTAGAAAGGAATACGATGGAAAGGTAATTTTGTTCGCATGATTTGGGATGAGTCTCTCTATGATCCTACCAAATAGTCTTAATTTCCATGACTGGACTGTTGAAACATAATTACTTCGAATCTTAGGTAGCTGATGTTTGGTCATGTGGGGTAACACTCTATGTGATGCTTGTTGGTGCGTATCCTTTTGAGGACCCTGATGACCCAAGGAACTTCCGCAAGACGATCACTGTGAGTAAATCCGGCCATTGCCCATAGCCCCCACTCCTGTTAATTCAAAATCTGTCTCAATTCTAGTCAGTCTGATCATGTAGCCTATTGACCTCTTTTGCAGAGGATACTCAGTGTACAGTATTCAATTCCAGACTACGTTCGAGTTTCAGCGGACTGCACACATCTCCTGTCCCGGATTTTCGTTGGAAATCCTGAGCAGGTGACTCCTCGTCATGAAATAATTCACCATTTCACCTAGTAGCTTAGTGATCAATCTGCATTGGCTTTCCAACATGGTGTCAACCGACAAACATTCGTAAATTGCATGCATTTCTCTTTGTAGAGGATAACTATCCCAGAGATCAAGAACCACCCATGGTTCCTGAAGAACCTGCCCATCGAGATGACCGACGAGTACCAGAGGAGCATGCAGCTGGCGGACATGAACACGCCGTCGCAGAGCCTGGAGGAGGTCATGGCGATCATTCAGGAGGCCCGGAAACCGGGCGACGCCATGAAGCTCGCCGGCGCCGGGCAGGTCGCCTGCCTGGGGAGCATGGATCTCGACGACATCGACGATATCGACGACATTGACATCGAGAACAGCGGGGACTTCGTGTGCGCCTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010605