BGIOSGA010608

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Revision as of 09:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010608| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010608, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA010608

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010608, complete gene.

LocusTag

OSJNBA0017N12.17

Ensembl Transcript ID

BGIOSGA010608-TA

Ensembl Protein ID

BGIOSGA010608-PA

Length

3776

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17318712..17322487

Sequence Coding Region

17322331..17322487,17321888..17322224,17319930..17320080,17319360..17319560,17318712..17318771

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17318712..17322487 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17318712..17322487 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGCGGCGGGAAGCGCGCGCTCCTCGTCGGCGTGAGCTACAAGGACGACAGCAAAAGCAAGCTGACGGGCTCGGCCAAAGACGTCAAGAGCATGTACGACCTCCTCCGCGATAGGTTCGACTTCCCCAAGGAATTCATCCACATGCTCACCGAGGACTTGGGCGCCGAGGACCCGTCGAAGGCGCCGACGAGGGAGAACATTATGAAGGAGATGCGGTGGCTGGTGGAGGGGTGCCGCGCCGGCGACTCGCTGGTGTTCCACTTCTCCGGCCACGGCCGGCAGAGGAAGGACGACAACGGCGACGAGGTGGACGGCCGAGACGAGGAGCTCTGCCCAGTGGACTACAAGAAGAGCGGCAGCATCTTGGACGACGACATCAACGATGCCATCGTCAAGCCGCTCACCCAAGGCGTGAAGCTGCACGCCATCATCGACACCTGCCACAGCGGCACCATGCTCGACCTCCCCTACCTCTGCCGCTTTAACAGAATGGGTCTATGTTCAAGATACAAGTGGGTTGGCCAAACGCGTTGGCGACTATCCCCAAAGAAAGAGTGGGCGATGGTCCCCGTAGGCGGCCACGCCATCTCCATCAGCGGCTGCAAGGACTACCAGAATTCTCTAGAGCCAGACAACACCGCCGGCGGCGGCGTCATGACATGGAGCTTCCTGGAGGCAGTGCGATCGCGGAGGACGATGACGTATGGCGAGCTGCTGGACTCGATGCGGGCGAAGGTACACCATAGGTTGCAGCAAAGCAGCTCCGGCAAGTGCGTCGTAACGGGCTGCCTCGGCTCGCTCGCCGCCAAGTGTCTCCCCTGCTGCTTCCTCAGCGTGCAGGAGCCGCAGCTCTGTTCGTCGGAGGAGTTCAACGTCTACGAGGAGCAGTTTATCCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGGGKRALLVGVSYKDDSKSKLTGSAKDVKSMYDLLRDRFDFPKEFIHMLTEDLGAEDPSKAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKKSGSILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWRLSPKKEWAMVPVGGHAISISGCKDYQNSLEPDNTAGGGVMTWSFLEAVRSRRTMTYGELLDSMRAKVHHRLQQSSSGKCVVTGCLGSLAAKCLPCCFLSVQEPQLCSSEEFNVYEEQFIL</aaseq>

Gene Sequence

<dnaseqindica>1..157#264..600#2408..2558#2928..3128#3717..3776#ATGGCGGGCGGCGGGAAGCGCGCGCTCCTCGTCGGCGTGAGCTACAAGGACGACAGCAAAAGCAAGCTGACGGGCTCGGCCAAAGACGTCAAGAGCATGTACGACCTCCTCCGCGATAGGTTCGACTTCCCCAAGGAATTCATCCACATGCTCACCGGTAATTAAACCGAAAGATCTATCACCAAAACTGATCGATCGATCGATGATCGATTGCGTGAGCTTCAATTCTTCACTGATCTGCTGGCTGATTCTCAATTTCTCAGAGGACTTGGGCGCCGAGGACCCGTCGAAGGCGCCGACGAGGGAGAACATTATGAAGGAGATGCGGTGGCTGGTGGAGGGGTGCCGCGCCGGCGACTCGCTGGTGTTCCACTTCTCCGGCCACGGCCGGCAGAGGAAGGACGACAACGGCGACGAGGTGGACGGCCGAGACGAGGAGCTCTGCCCAGTGGACTACAAGAAGAGCGGCAGCATCTTGGACGACGACATCAACGATGCCATCGTCAAGCCGCTCACCCAAGGCGTGAAGCTGCACGCCATCATCGACACCTGCCACAGCGGCACCATGCTCGACCTCCCCTACCTCTGCCGCTTTAACAGGTACTCCCTCCGTCCCAAGATATTTGACGCCGTCGATAATTTTATACATGTTTGACCGTTCGTCTTATAAAAAAATTTAACTAATTATTAATTCTTTTCCTATCGTTTAATTCATTGTTAAATATACTACTATTACTAATCAAGTTTTTTTTAAGTAATATTCACAAAAGTTTTTAAATAAGACGAACGATCTAACATGTTTAAAAAAATCAACGGCGTCAAATATTTAGAGGCGGAGGGAGTAGTATCCTTATAGGAGTGTAGGGAAAATAAATGCTCTCGCGCGAGGACATGGTGAAGAAATAGCCTCTCCACTGGACAAAGCTTCAGCGCCCCTTTACATATATGTATGGCAAACAAATTTAAAAGGCTTCTGTAGTAGTAGCATTGTAGGCTACCACCCCATGGCCCATCGCCGCTCCTCCTCCTCCTCCTCTCCCATAAAGTACATGTTAGATCGGTTCTCAGCAGTCTATTTGAGCACCCAGCCCTCAAGAAGTGTTTTATTTGGTAGTCTAGCGTGCTGGCTCAAGCTCAAGAACAAGCCAAGCTTACTCTTTTAGCTTGTGACACGATCGAGCTGAACCTCTTTCCAGCAAGCTTTCACAACCGAGGCTAGGCTAGTCTCGGTTGGGTCGCTTCCACCCCTAACTACGTACTCCTCTCTTTGTCTCACTCATTAATAATATTATATTCAAACTTGTCACAGTGTTCAAAACTAATCTTTGACTTTAAATTTCTCATATACTATTATTTTCATCAAATAAAACGTAATTTATAATAAATTATTTATTGTCAAATATTTGAAGAGTTAAATATTAAAATACGTGCATAGCTTAATGAGTGGGACAGAGGGAGAGGGAGTACCGGTACTATCGTAGTACCACACTACTTCAATAGATGGCCATAAGGCTCGAGGCCCGACGGCCCGACCCTAGAACGACACAGCACAACTGGTGTTGGGCCCATGCAGGCCTAGCCCGACAGTTGGGCCATGCCTGGGCCGATGCCTTGGCATGGTGGGCTAGCCCGGCTCGGCACAATCAAAGAAAAATAGTTGAGGCTCCCACAATAGACTTAAATCATCCATATAATGCACATCTCAAAGAGAAGAGGGATGCAAAATAGATTTATTCCAGCCATATAAGACATAGCCCAAAGACATAAGGGAGAAAAAATAGACTTATACTACGGGCTATCGTACATTCAGGCTTGGCCGGCACGGCCCAAGACTTATTGGGCCATGCTAGACCGTGCGTGTAGCCCGTGGGTAGGCCTGGCCCGGCCCGAGATGTAGGTCGAGCCGTGCTGGCCCAATTGACCTCTCTCCGTGCCTGGGTCGTGTCGGGCCGGACGACCCATTTGGCCATCTATAACTACTACCACTCTCATCTTCGTAAATCATTTCGATGACAATTTGATTTCAAAATCTGGAATGAAACTTTGCAAGTTGTAGTTAACATGGACTATTCTCTTGCTCTACGAGCTATATCTGAGAGATAGCGAAGGTATTCAACGTAGTATTAAAATTTTTATTTTTATACTGTTTTAATTAAAATAGTCCATGCAACAGTGGATGAGAAAAATAAACTTTATAACGATTGCCACTAGTTGAAAAATTGACTTGGAGAAAAGTTGGAAGACCAAAAATAAACTTTATACTACATACATACATACTTTTAGTACTACTGTTCACTTTGTATATATCACTAAATTAATAAAGCAATTTATTTCCTATAGTAGTTGTTGATAATATATTGCCAAAAAAAAAAAAACATCAAACTAATGCTACACCTTATAATTTCAGAATGGGTCTATGTTCAAGATACAAGTGGGTTGGCCAAACGCGTTGGCGACTATCCCCAAAGAAAGAGTGGGCGATGGTCCCCGTAGGCGGCCACGCCATCTCCATCAGCGGCTGCAAGGACTACCAGAATTCTCTAGAGCCAGACAACACCGTACGTCCATGGTTTGCAAATTTCGTTTTGCACATTCCTATCACCGAAATCTAAACAAATTTTGACCGAACTTAAATGAAGTTCAACCAAATTCACAAAGAAATATAAACTTTCTGAATTTTCTCAGCGAGACATAGCTTTGTGCCCGCAAATAAACTCGAAATCTTTCTGTTCACTAGTGCGAGGGCTGTATATGAGATTAATACAAGAAAAAATTTATGATTTATAAGAACATATCTTGACATATCTAAATTTTACATAATTACTCAAATTATATTGTACCCGAAGATACTATAATATTCTTTTTTAAAAGAAATATGATATATCCTGGTACACTCTGAAATATGTAATTAATATAATCAAAAGCAGGCCGGCGGCGGCGTCATGACATGGAGCTTCCTGGAGGCAGTGCGATCGCGGAGGACGATGACGTATGGCGAGCTGCTGGACTCGATGCGGGCGAAGGTACACCATAGGTTGCAGCAAAGCAGCTCCGGCAAGTGCGTCGTAACGGGCTGCCTCGGCTCGCTCGCCGCCAAGTGTCTCCCCTGCTGCTTCCTCAGCGTGCAGGTGAGAGAGATCGACCACCACCAGAGAGAATCAATTAATCCATCCTTCGATATACTCCCTCCTTTCCGGTCCTTTCTGAATATATGAAGCCGTTAACTTTTTTTAAACATGTTTAATCATTCGTCTTATTTAAAAATTTTTGTGAAATGTGTAAAATTATAAATTATATGTATACATAAAAGTATATTTAACAATAAATGAAATGATAGAAAAAGAATTAATAACTACTTAATTTTTTAAAATAAGACGAATGGTCAAACATTTTTTAAAAAGTTAATGGCGTCAAATATTTTGGGATGGAGAGAGTATATGGAGACGGGCGTTACTTACGTACGATCTAATGTTTACGATGGTTGGATCGAACGTGCCTCTCCTACTGTTTATTAACGGCTGCAACTTTAGATTGCTCTTGCACTCAAACGGTGGCGGCGTTTAATCGTACTGAAATCGTAGACAAACATCGTATGCACGGTATTTTCCTATGGAGATTGCATGCCAGATTGCAGAGAAGCTAGCACATTGCACACCATATGCATGATCACTTACTGTATTTTGCTCTAGTTAAGTTTGTTTGGGTTTGCCATGCAGGAGCCGCAGCTCTGTTCGTCGGAGGAGTTCAACGTCTACGAGGAGCAGTTTATCCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010608