Os12g0266200

From RiceWiki
Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0266200| Description = Similar to Fibrillin-2 precursor| Version = NM_001073067.1 GI:115488095 GeneID:4351938| Length = 2387 bp| Definitio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0266200

Description

Similar to Fibrillin-2 precursor

Version

NM_001073067.1 GI:115488095 GeneID:4351938

Length

2387 bp

Definition

Oryza sativa Japonica Group Os12g0266200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9475433..9477819

Sequence Coding Region

9475511..9475689,9476024..9476158,9476787..9477759

Expression

GEO Profiles:Os12g0266200

Genome Context

<gbrowseImage1> name=NC_008405:9475433..9477819 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:9475433..9477819 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatttgtccatggagtgtagcggcggcggcggtggcgctgctgcttctgtcgccgggggagaatcagatggtccgagtgtcagcacagccgacgaagacgaggtgcgccgccggcgtcgtcgacacctgcggcgacgtgggcgtgccgtacctgttcggcatcgacggcggtagctgcagcttcctcccgggcttcaacctcacctgcgaccgcaccaagcagccacacaggctgttcctcggcgacggctcccacctccaggtcaccgagatctccctggccaactacacggtgcgcgtcctcaacggcgtcggcaccgtgaacttcacctttgcggggcacaacgattccacggcgaagtgggccggagtcagcgtcggccaagacgacgggccgtacatcgtctcagaggagcacaaccagctggtggtgacggggtgcaacatcatggcctccctgctcgggaacagcggcagcaacgtcatcatcggctgctcctccttctgctccatcaccgactggtggggcgccgacccaatagtgcactccggcgccggcggcgcgtgctccggcctcggctgctgcgacgtcaacatcaccatcggccggccctcctacgaactgcagctcaggtggctcgactgggaccacaactacgacgacctcctgcccatcgccgtgcgcatcgcggagcgcggttggttcgacggcatgtcgaccaagcttctcaggaaaaacagccgcagcgctgttcccgtgcccgtggtgctggagtgggccgtggcgtctgttcacaagccgcccactcccgtagacgtgaacagcacgtgccccaaggacccggcgagaagcgagtgccgtagcagcaacagcttctgccgcaacatcgccaacatgtaccgcagcggttacgtgtgcaagtgcgacgacgggtaccagggcaacccttacctcaccggcggctgccaagatatcgacgaatgttcgctgccgggcaagtgcttcggtgagtgtacaaacacgccaggaaactacagttgccgttgtccgcgtggtgcgcgtggcaatccctacaccaaagatggctgcatcaagtttcctctaggtccgggtctacagagaaaatggattggtgcgggttggatttgctttggtgtgagtccgaatggtcctttctctcgtcttcttggcatgttgatgagaaaccaacgtggtgggagggacggcatcacgttgaaccgcaacgctagtgatgctggcgccaagagaaatgtctatttgtaa</cdnaseq>

Protein Sequence

<aaseq>MICPWSVAAAAVALLLLSPGENQMVRVSAQPTKTRCAAGVVDTC GDVGVPYLFGIDGGSCSFLPGFNLTCDRTKQPHRLFLGDGSHLQVTEISLANYTVRVL NGVGTVNFTFAGHNDSTAKWAGVSVGQDDGPYIVSEEHNQLVVTGCNIMASLLGNSGS NVIIGCSSFCSITDWWGADPIVHSGAGGACSGLGCCDVNITIGRPSYELQLRWLDWDH NYDDLLPIAVRIAERGWFDGMSTKLLRKNSRSAVPVPVVLEWAVASVHKPPTPVDVNS TCPKDPARSECRSSNSFCRNIANMYRSGYVCKCDDGYQGNPYLTGGCQDIDECSLPGK CFGECTNTPGNYSCRCPRGARGNPYTKDGCIKFPLGPGLQRKWIGAGWICFGVSPNGP FSRLLGMLMRNQRGGRDGITLNRNASDAGAKRNVYL</aaseq>

Gene Sequence

<dnaseqindica>2131..2309#1662..1796#61..1033#actcatctaataccgaattattagctggagagatcgattcaaggctattgtctggatcgaatgatttgtccatggagtgtagcggcggcggcggtggcgctgctgcttctgtcgccgggggagaatcagatggtccgagtgtcagcacagccgacgaagacgaggtgcgccgccggcgtcgtcgacacctgcggcgacgtgggcgtgccgtacctgttcggcatcgacggcggtagctgcagcttcctcccgggcttcaacctcacctgcgaccgcaccaagcagccacacaggctgttcctcggcgacggctcccacctccaggtcaccgagatctccctggccaactacacggtgcgcgtcctcaacggcgtcggcaccgtgaacttcacctttgcggggcacaacgattccacggcgaagtgggccggagtcagcgtcggccaagacgacgggccgtacatcgtctcagaggagcacaaccagctggtggtgacggggtgcaacatcatggcctccctgctcgggaacagcggcagcaacgtcatcatcggctgctcctccttctgctccatcaccgactggtggggcgccgacccaatagtgcactccggcgccggcggcgcgtgctccggcctcggctgctgcgacgtcaacatcaccatcggccggccctcctacgaactgcagctcaggtggctcgactgggaccacaactacgacgacctcctgcccatcgccgtgcgcatcgcggagcgcggttggttcgacggcatgtcgaccaagcttctcaggaaaaacagccgcagcgctgttcccgtgcccgtggtgctggagtgggccgtggcgtctgttcacaagccgcccactcccgtagacgtgaacagcacgtgccccaaggacccggcgagaagcgagtgccgtagcagcaacagcttctgccgcaacatcgccaacatgtaccgcagcggttacgtgtgcaagtgcgacgacgggtaccagggcaacccttacctcaccggcggctgccaaggtacatgtatactccctccgtttctttagtataagactccgtttctttagtatacgacgctactgacttttaaacacatggttaaccattatcttatttaaaaaatttatgtaaatgtataagatataagtcatgcttaaattattttgaatgataaaacaactcacaacaaaataaattataaacgtaaaattttttaataagacgaatggttaaacgtgtaataaaaaagtcaatggcgtcatttattaaaaaccggaggtagtatgtacttatatacgtattatattatactccctcagataacatcgttaatttttggcatgacgtttcagcattcattcctattcaaaaaatttacataaatattatttattttgttatgagatgctttattattaaataatttttacgtatcatttatactttagcatatttacattaattttttttgataaggtgaatggtgtcgaacattatttcaaaattcgacagcacgtcatatattaaaaaaacaaagataacttatacaatattcatattctatacttagtgcattcctaagctaaattagctatctatataccccattatatcttctgttttctcggtcaacataacattccagatatcgacgaatgttcgctgccgggcaagtgcttcggtgagtgtacaaacacgccaggaaactacagttgccgttgtccgcgtggtgcgcgtggcaatccctacaccaaagatggctgcatcaagtttcctctaggtcagcaccgtaatcataactattaattgctagctatcttctgctttcattctagcttttaattttataaaaagaatgtaccaaatgcaaactttttttacaaagactagcaaatatggtcgatctgcgcgttgcaacggattagtttatgaaaaaaaattctagcatggtaagctaattgtgcaaataacactgaaacaaacagcacttctatgattttttttttgtcgtcctattatgcaaacactgaatagtcattcaaccttggaataatgcagtgggttaaaatcctatccacagtattcatttaggttatgcatacttgtttggataggtccgggtctacagagaaaatggattggtgcgggttggatttgctttggtgtgagtccgaatggtcctttctctcgtcttcttggcatgttgatgagaaaccaacgtggtgggagggacggcatcacgttgaaccgcaacgctagtgatgctggcgccaagagaaatgtctatttgtaaaataagtttctctaagattctatttgtaaaaaagttttaaaaagatctaaaatatgaactgctctaattaacttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0266200, RefSeq:Os12g0266200