BGIOSGA010622

From RiceWiki
Revision as of 09:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010622| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010622, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010622

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010622, complete gene.

LocusTag

OS03G0383800

Ensembl Transcript ID

BGIOSGA010622-TA

Ensembl Protein ID

BGIOSGA010622-PA

Length

5740

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17025642..17031381

Sequence Coding Region

17031219..17031381,17029820..17029854,17029642..17029715,17027903..17029209,17026814..17027011
,17026572..17026723,17025642..17026106

Genome Context

<gbrowseImage1> name=IndicaChromosome03:17025642..17031381 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:17025642..17031381 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAGTAGAGGGGCGACAACTAGTGGGACTTGGGGACGTGCGAAGCCCTACCGTGGAATCGGCCGCGCCGTGGCCTTTGATTCGGGGGCGATCTCATTGTTGTCTCGCCGCAAAAAGCCTGACGACAGGAGGTCTATAGAGGGTGCCGAGGTGGAGGGTGGAGCGCGCGTGGCCTTGGAGGATTCGCGGCGGCTGGGTTTTGGCGCTTCCGTGAAGGGTCGTGCCCCTCCCGTCTCCGACGTCCGATCTCTGTGCGCCGGGGTTGTCAGACCTATTGATCAATGGCGAGTTACTGATCTGAAGGATGAACTTCGTAAGAGGAGGCTCCCTGTTAAAGGCTTGAAAGATGAACTTGTGAGGCGACTCTTCGAGTCAATTCAGAGTGAAAAAGAAGAAGAAGAAGAAGAAGAACAAGATAATGAAACTGTCGAAGTGAATCCAGCAGCTAACCAGGCATCTGAAATACAGAGTGTTTCTCAGGAAACTACAGTTTCTATTACAGAAGTTCACAAGGAAACTGTGGTTCAAGTAACTCAGGAAGCTACACCTCCTATCACTGAAGTAAGTCAGTCGCTCACAGTTTCAGCTGTCGAAGAGCCCCCCAAGGTTAACGCGGTGGCAACCCATGAAGCTCCCTTAAGCAAGGCCCCAACAGACAAAGGAGAAGAGCCACCAATTGCAGGAGATGTTTCCACAGTGCAAAACGAACATCTTCATGCTGAAAATAATACTGAACCTTTTGTTGAGAAGACACAAGATGTTGGCACCAATGAATCAATTGGTGCCCTTGATATGACCAGTGCTGATGTAGAGTCAGACATGACCTCTTCTGATATCAAGATAGATGCTACTGAAGCCAGCAAAGTTCAACAACATGACACAGTAGCAACAACTGTGGATGCCATCCCAACAGATGCTGATCCTATGGATACTGATGTTGCAACTGAGAAGGCGGTTCTTAATGATTTGGGTGACACTACTTCAGTGTATGATGAAGAGCGCAAAGATTCTGAGCTCACGAATGAGGACGAGAAGCCCATCGCACCAAAACCAAATGATCAGGTACCTGAGGTTAGCCCAGATTTAGGGTCTCCAATTAAGTGTGAGTCAATTTCTAGCGATGATATATCAACTAACAAAAAGAATAATATAAAGGATAATTTGAATGCTAATAATTTTGATTTAGAACTAGAGGCTAAGCCAGAGATGGTAAAACCATCTTCTGGCATTACTTCCATAGGTGGAGATTTGCAGCCATTGGATGATGACAAAGATCTGGGTAAAAACCAGTCATCTTTGGAATACATAGATTCCACAGCTAATGTGGATGAAGGCGGCTCTCCAGAGAAACTAAATTTAGACAGGAGTTCAGGTGATGAGTCAATGGAGGAGGATGTCATGGAGATTAAGCAAGTCGAGTCCAACATTAAATCTGAAGGAACAGCTGAGCTTAGCTCAGATCATGTGAAAGAGGTGTCCCTCCCTGATACTGTTGTGGACGATTCCTCTGTTGACACGAAAGAAGTTATAGCTGATGAAAAGACAGCAGCTTCAACTGAAAAGAGGAAACTCGAAGCTGAAGAAACTGTTGCTGCCACTGAGCCAATCAAACGCCAGCGTCGATGGGCTGCAGATGGTGCCAAAGTTCCAGAGAGACAACCAATAAGTCATAGTGGCTCTGATGCTCCTAAGGAAATTTTTCAGCCTGCTTTAAAACGATCTTTTGGCAGGTCTGATTCAACAGCTAGTGGAGATTCCCCAAAGGAGCGGGTTGTGCCACCATCTCAGAAACCTGCAACAACTTCCTTGAGAATTGATCGATTTGTAAGGCCATTTACGCTGAAGGCTGTGCAAGAACTTCTTGGTAAAACTGGATCTCTTTGTAGTTTCTGGATGGATCACATCAAGACCCACTGCTATGTTACGTTTTCATCAGTAGAGGAAGCTGTGGCTACTCGGGATGCTGTCTACGATTTGCAGTGGCCACCAAACAATGGCAATCGTTTGGTTGCTGAATTTGTTGATCCCCAGGAAGTGAAGCTCAAGCTTGATCCTCCTCCGCCAGCGGCGGCTCCTATTAGCCCTGCTACTACACCAAAGGAGCCACCCTTTCAACAGGCTCAGGCTAATCAAAACATGCCTCGTCAAGCCGCTGCACCAAGGGAGCACTTGCCACCTCCACCGCCTCTTACTACGCTTCCTACATCTGACTCAGGATCAGCAAAGGAGAGGCTTCCACCCACCCCAAAGAAACAGCCGGAACCTCCTGTTGTGACACTCGATGATCTCTTCAGGAAGACACATTCTTCTCCTAGGATTTATTACCTTCCTTTATCAGAAGAGGAAGTGGCAGCCAAGCTTGCTTCACAGGGCAAAGGCAAGAGAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MGSRGATTSGTWGRAKPYRGIGRAVAFDSGAISLLSRRKKPDDRRSIEGAEVEGGARVALEDSRRLGFGASVKGRAPPVSDVRSLCAGVVRPIDQWRVTDLKDELRKRRLPVKGLKDELVRRLFESIQSEKEEEEEEEQDNETVEVNPAANQASEIQSVSQETTVSITEVHKETVVQVTQEATPPITEVSQSLTVSAVEEPPKVNAVATHEAPLSKAPTDKGEEPPIAGDVSTVQNEHLHAENNTEPFVEKTQDVGTNESIGALDMTSADVESDMTSSDIKIDATEASKVQQHDTVATTVDAIPTDADPMDTDVATEKAVLNDLGDTTSVYDEERKDSELTNEDEKPIAPKPNDQVPEVSPDLGSPIKCESISSDDISTNKKNNIKDNLNANNFDLELEAKPEMVKPSSGITSIGGDLQPLDDDKDLGKNQSSLEYIDSTANVDEGGSPEKLNLDRSSGDESMEEDVMEIKQVESNIKSEGTAELSSDHVKEVSLPDTVVDDSSVDTKEVIADEKTAASTEKRKLEAEETVAATEPIKRQRRWAADGAKVPERQPISHSGSDAPKEIFQPALKRSFGRSDSTASGDSPKERVVPPSQKPATTSLRIDRFVRPFTLKAVQELLGKTGSLCSFWMDHIKTHCYVTFSSVEEAVATRDAVYDLQWPPNNGNRLVAEFVDPQEVKLKLDPPPPAAAPISPATTPKEPPFQQAQANQNMPRQAAAPREHLPPPPPLTTLPTSDSGSAKERLPPTPKKQPEPPVVTLDDLFRKTHSSPRIYYLPLSEEEVAAKLASQGKGKRE</aaseq>

Gene Sequence

<dnaseqindica>1..163#1528..1562#1667..1740#2173..3479#4371..4568#4659..4810#5276..5740#ATGGGAAGTAGAGGGGCGACAACTAGTGGGACTTGGGGACGTGCGAAGCCCTACCGTGGAATCGGCCGCGCCGTGGCCTTTGATTCGGGGGCGATCTCATTGTTGTCTCGCCGCAAAAAGCCTGACGACAGGAGGTCTATAGAGGGTGCCGAGGTGGAGGGTGGTGAGCTTGAAGAAGGAGGGGTCGATGTCCATCTCATCGGGGAGGGAGGGTGGCGGGAGGAGGACAGAGATCCTATATCGTCGGTGCTAATTCCACTTAGCTCCTATATCTTCCTTCCAAAATCAGGCGCTAACATTGTCAGAGCTTCTAGCCATGTCTACTCACCGCCTCGATAAAGGCCGACACCATATCCTCCTCCTCCTCCTCCTCCTCCTCCAGGGGCGAACCATGCTTGGAAGCGTGCCACCTTGGTCTTGGTGGCAGCCGTGGCGTAGCCACTTTGCACGGTGCTTGCGGTGGCGACAACGTTGATTTGACCAGGCACGAGGACTGGGCGGCCCTAGAGGTAGATTAGGAGTGAGGTCTAAAGTCGTGGTTCCCCCGCAATGGGGCAATCGCTGTCACAATCATGTTGGTCGGTGGCGAGCTGCTTAACACGGGGTGCCTCGTTTGGTATCCTCATCTATGTGTGGCACGACTCGCTGGCTTGGTGATTCCGGAGATTGATGTTTGAGAGAGATAAAGGGGAGAGAGAGAAAGCCATGTAGGCCCCTCAAGCTGACTCGCCCCGAGTAGACCAGGTCAATGAAAACTATCCTCAAAACAATAGAGGGAGTCAAATTGCACCCATTTTATAATTGGGAGGTCAAGATATTCAATATTAGGGTTGAGGAATACGAATCAATTGCACCTATATTTCAGAGAATCGAAGTGAACTTATTGCTTTTTTAAGGAAACCTTGTGCTGAATTTGTCCCCACCTAAATTTTTGGCCTGAAAACGTAGATATATTTGAAAAATCAAACGTGCAAATGAAAGTGGGTTCCTCATTTCGTTCTCTAAAATCATGTTTCCCAAGAACTTACTGATAATAAATGAATACACAATCTGATTATCTGAAGAGAAATACGTGTCCTACACACGGAAGCGCACTCCCCAAAACCTCAAAAACGAAACGATAAGGTGTTTCTGTTCCGCGGGGGGACCCCACCTGTCAGCCCCCCAGCCCCCAAGCCGCTAGAAAGATCCAAACCCCCCTCGCCTCTCGCTGTCCCCGGCACCACACGCGCCCGGTACCCGGCACATCCATGTCCCGCCGCCCTCCCTCGTCCTCTCTCTCCTCCCTCCGCGCCGCGCGCCCCCAAACCCTAGAACTCCACGCACGCGACGCGAGCTCCAATCCCACCCCGTGTTCCCCCCCTCCCTCTGATTCGCCTGCAACCACCGCTCTCCTCTCCAATCTAATCCTCTTCCGGCTGTGCCGTCCTCCTGCTCCGCTTCCCTTTTCTCCGCGAGATTTTTTTTCTGTTTGGGGAGGAAAATTTTTTTGGGTGCTTTTTTTCTTCTTTGGTTGTGTTGTTTCAGGAGCGCGCGTGGCCTTGGAGGATTCGCGGCGGCTGGTAAGAGAGGAATCGGCTCTTTTTTTTCCCCACGCCCTGCGGTTGCGGTGGGATTTTTGTTAGGGTTCGTGTTTGATCTGACGGTTCCGTGTTTCCTGGGCTAGGGTTTTGGCGCTTCCGTGAAGGGTCGTGCCCCTCCCGTCTCCGACGTCCGATCTCTGTGCGCCGGGGTTGTCAGGTGAGCCTCCCCGCCCTCTGTGCCTAGCGATTTGTTCTACGGTTAGGATCCAGGAGTGGTGCTGGGACTTGGGGTCAGTGTAATGGTATCGGATTGAATGATATCCAGATTTATGTGTGAGTTATAATATTGGTAGTGATGAATCTAGCTACTATTTTGTTATTTCATATATCATCTGGTGAATTAGTATAGTTCATTCATTTAGTCTTTAAGATAGAAAACTACCTATACTATTACTCCATAAAATAGAAACAACACTACAGAGGGTTGGAAAATTATGTTGGTGTGTTGCTGACATGTGGTCCTACTTGCCATCATTTGATATTATTTTCTACCGTATACATGTTTTTATGTGACCAAGCAAATCATTGACATTTACTGATTTCCCATGTTGGCAGCTACAATGTCATCATACCCTGTGCTAAACAACAGACCTATTGATCAATGGCGAGTTACTGATCTGAAGGATGAACTTCGTAAGAGGAGGCTCCCTGTTAAAGGCTTGAAAGATGAACTTGTGAGGCGACTCTTCGAGTCAATTCAGAGTGAAAAAGAAGAAGAAGAAGAAGAAGAACAAGATAATGAAACTGTCGAAGTGAATCCAGCAGCTAACCAGGCATCTGAAATACAGAGTGTTTCTCAGGAAACTACAGTTTCTATTACAGAAGTTCACAAGGAAACTGTGGTTCAAGTAACTCAGGAAGCTACACCTCCTATCACTGAAGTAAGTCAGTCGCTCACAGTTTCAGCTGTCGAAGAGCCCCCCAAGGTTAACGCGGTGGCAACCCATGAAGCTCCCTTAAGCAAGGCCCCAACAGACAAAGGAGAAGAGCCACCAATTGCAGGAGATGTTTCCACAGTGCAAAACGAACATCTTCATGCTGAAAATAATACTGAACCTTTTGTTGAGAAGACACAAGATGTTGGCACCAATGAATCAATTGGTGCCCTTGATATGACCAGTGCTGATGTAGAGTCAGACATGACCTCTTCTGATATCAAGATAGATGCTACTGAAGCCAGCAAAGTTCAACAACATGACACAGTAGCAACAACTGTGGATGCCATCCCAACAGATGCTGATCCTATGGATACTGATGTTGCAACTGAGAAGGCGGTTCTTAATGATTTGGGTGACACTACTTCAGTGTATGATGAAGAGCGCAAAGATTCTGAGCTCACGAATGAGGACGAGAAGCCCATCGCACCAAAACCAAATGATCAGGTACCTGAGGTTAGCCCAGATTTAGGGTCTCCAATTAAGTGTGAGTCAATTTCTAGCGATGATATATCAACTAACAAAAAGAATAATATAAAGGATAATTTGAATGCTAATAATTTTGATTTAGAACTAGAGGCTAAGCCAGAGATGGTAAAACCATCTTCTGGCATTACTTCCATAGGTGGAGATTTGCAGCCATTGGATGATGACAAAGATCTGGGTAAAAACCAGTCATCTTTGGAATACATAGATTCCACAGCTAATGTGGATGAAGGCGGCTCTCCAGAGAAACTAAATTTAGACAGGAGTTCAGGTGATGAGTCAATGGAGGAGGATGTCATGGAGATTAAGCAAGTCGAGTCCAACATTAAATCTGAAGGAACAGCTGAGCTTAGCTCAGATCATGTGAAAGAGGTGTCCCTCCCTGATACTGTTGTGGACGATTCCTCTGTTGACACGAAAGAAGTTATAGCTGATGAAAAGACAGCAGCTTCAACTGAAAAGAGGAAACTCGAAGGTTTATTTCCTGACATTCCCTTTATGCTTCTCATTATTCCTTCAACTTGAAATTGCATATTTTCAGCATAGCCATTCATGGATTATAATATCTTGAATCAGACTGTCCTTGCCATTATGATTGTGCACAAAGTTGCGCAGATTTTTATTATGTTCTTTTTTCGTCCTTAGTATCTTGCAGTCACGTAAATAAATTATACTTTCAAAGATTTAAGCATCAATAGCCTGTAAGTAAATTTGTTTCTCACCAATAGCAATCAAGTGTTACTCCCTCTGGTTGGGAATACATGGCTGTTGACTCAAGTATTCCTGACGGGGGGTAGTCTTGTATAATAGCGGTTGTGGGCGCTATCTGCAAAATAGTGGTTGCTATTTGGTACATGTAAAATGTACATATTTTTATTTTTTGGACTTGGCTCTATGAATAACAAGTTTTCTAAACAATGATTTTAGAGTAAATTAAGGACTACTTTACAATTTATAATTTCAACAAATAAACCTGTAGTTTGAGTTTTCTTTTATTCCATTATTGGAATATGGTGTCCATTATATCGATCGCTACGCTAATCTGATGGAAATCTGCTACTACCCTGCTATCTGCTATTTAGTACCTTAGCTAGGACAAGCAAATCTGCTATGTAGTTCTTTAAAAAAAAATTATGAGAGGTCGTGCTATTGTTGTCAACCGAGTTAACTAAAACTCTTAAATATTAGATAATTTGATGAAGTTGCGTGGCTATATTGTGTGATTGCTTTCCTTTTTGTTGAGTGTTGCTTTATTCATGTGAAGGAATTATCCTGATTGTCAGTGAAGTAATAGGACTATGATTATTTGGTCATTTTCAAAGTTGAATTAACGTCTGTTTTTTGTTTTGGTGTCTGCTGAACACAGCTGAAGAAACTGTTGCTGCCACTGAGCCAATCAAACGCCAGCGTCGATGGGCTGCAGATGGTGCCAAAGTTCCAGAGAGACAACCAATAAGTCATAGTGGCTCTGATGCTCCTAAGGAAATTTTTCAGCCTGCTTTAAAACGATCTTTTGGCAGGTCTGATTCAACAGCTAGTGGAGATTCCCCAAAGGAGCGGGTTGGTGAGTCCTCTATTTGCTGATCACAAGTCTATATATTTCATTAGTCACAATCCTGTAATCGAACTGTTTTTCCTTTATTTTGGCTTGCAGTGCCACCATCTCAGAAACCTGCAACAACTTCCTTGAGAATTGATCGATTTGTAAGGCCATTTACGCTGAAGGCTGTGCAAGAACTTCTTGGTAAAACTGGATCTCTTTGTAGTTTCTGGATGGATCACATCAAGACCCACTGCTATGTTACGGTATTTTTCCTTGCTATCGAAGATTTACAATTGTTCTTAGTTTGTTACTTATCATATCATCTGAATTGCATAAACATAGTTAACTGAATACATTAATTTCTGCACAAAAAATCTCTTTAGCCCTTTTTGTTAATTAGCATTACCAAAATGTGTTTAATCATGGGTATAATGGATCATTTCGACATGGGAATTCTTAACATGGACCCAGTGATAGATCATCTTGAGATGGTAACCAGAGAACTTAAAATTGGTTTTATAAATGTACTCCCTGTAGTCTAGTCAAATATATTTGATGCGAGAACTAAGTTTAGGTGTCCCAACGTCTGGAGGGAGTACTCTGTACCAGAATAATTTCATTCTAGTATAGCATTTGAAGTTATTGTGTGGACTGGTTGTGCGTTAAATGTGAGCTTGAGCTTGCGTTGTTGTTCCACTGACTTTGCCTACATGGCCCCCATCTTTCAGTTTTCATCAGTAGAGGAAGCTGTGGCTACTCGGGATGCTGTCTACGATTTGCAGTGGCCACCAAACAATGGCAATCGTTTGGTTGCTGAATTTGTTGATCCCCAGGAAGTGAAGCTCAAGCTTGATCCTCCTCCGCCAGCGGCGGCTCCTATTAGCCCTGCTACTACACCAAAGGAGCCACCCTTTCAACAGGCTCAGGCTAATCAAAACATGCCTCGTCAAGCCGCTGCACCAAGGGAGCACTTGCCACCTCCACCGCCTCTTACTACGCTTCCTACATCTGACTCAGGATCAGCAAAGGAGAGGCTTCCACCCACCCCAAAGAAACAGCCGGAACCTCCTGTTGTGACACTCGATGATCTCTTCAGGAAGACACATTCTTCTCCTAGGATTTATTACCTTCCTTTATCAGAAGAGGAAGTGGCAGCCAAGCTTGCTTCACAGGGCAAAGGCAAGAGAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010622