BGIOSGA010638

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Revision as of 09:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010638| Description = cDNA clone:002-182-G12, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA010638, complete gene.| t...")
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Gene Name

BGIOSGA010638

Description

cDNA clone:002-182-G12, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA010638, complete gene.

LocusTag

OsJ_11041

Ensembl Transcript ID

BGIOSGA010638-TA

Ensembl Protein ID

BGIOSGA010638-PA

Length

3723

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16717793..16721515

Sequence Coding Region

16721407..16721515,16720984..16721312,16720805..16720903,16719429..16719681,16719061..16719171
,16718842..16718978,16718653..16718766,16718373..16718572,16718072..16718269
,16717793..16717964

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16717793..16721515 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16717793..16721515 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCCGGCGAGGCAGCCGGCGCCGTCCTCTTCCTCCTCGCCGCCGCCGTCTCCCTCCTCGCCGCCGTCTCCACCGGCGCCCTCGACTTCACCTACCTCGTCACAGTCGTCGGCGAGGGATCGTCGACGTCGCCGGGGAGCGGCGGCGGCGCGTGGTGGCGCGAGGCGTGGGTGGGGGCGCGGTCGCGCGCGGTGGCGCCGGCGCTGCAGGTCGGGGTGTGGGCGTGCATGGTGATGTCGGTGATGCTGGTGGTGGAGGCCACCTACAACTCCCCGTCAGCTTCGCCCCAGGCTCGTCGGCTGAGGCCGGAGCGGTGGTTCAAGTGGGAGCCCCTCGGCGGCGGCGCCGGCGCCGGCGACGAGGAGAAGGGGGAGGCTGCTGCTGCTGCTTATCCCATGGTCATGGTCCAGATACCCATGTATAATGAGCTCGAGGTGTACAAGTTGTCAATCGGAGCAGTTTGTGGGCTCAAGTGGCCAAAGGAGAGGTTGATAATCCAAGTTTTGGATGATTCCACGGACGCATTTATCAAGAATTTGGTTGAGCTGGAATGTGAGGATTGGGCAAGCAAAGGTCTAAACATTAAGTATGCCACCAGAAGTGGCCGCAAAGGGTTCAAAGCAGGAGCCTTGAAGAAGGGAATGGAGTGGGACTATGCCAAGCAATGCGAATATGTTGCCATATTTGATGCTGATTTCCAGCCAGAACCGGATTTCCTTCTCAGAACTGTCCCGTTCCTCATGCACAATCAGAATGTTGCGCTTGTACAAGCTCGGTGGGTTTTTGTGAATGACAGAGTAAGCCTACTGACAAGGATACAGAAGACATTCCTTGATTACCACTTCAAAGCTGAGCAGGAGGCAGGATCGGCTACATTTGCTTTCTTCAGTTTCAATGGGACCGCTGGTGTATGGCGCACAGAAGCTATCAATGACGCAGGAGGTTGGAAGGATCGAACTACAGTTGAAGACATGGACTTGGCTGTCCGAGCAACCTTAAAGGGATGGAAATTCATCTATTTAGGGGACCTCAGAGTAAAGAGTGAGCTTCCATCCACTTATAAAGCATACTGCCGACAACAGTTCCGGTGGTCTTGTGGCGGTGCAAACTTGTTCCGAAAGATGATATGGGATGTCTTGGTTGCCAAGAAAGTGTCATCCTTGAAGAAGATCTACATACTGTATAGCTTCTTCCTGGTGAGGAGAGTTGTTGCCCCTGCTGTTGCCTTTATTCTCTACAATGTTATCATCCCTGTGTCGGTCATGATCCCAGAGCTCTTCCTGCCAATCTGGGGCGTTGCCTACATTCCTACAGCACTCCTGATTGTCACTGCCATAAGAAATCCAGAAAATCTGCACACAGTGCCACTGTGGATTTTATTCGAGAGCGTCATGTCCATGCATCGGTTGAGAGCTGCTGTAGCTGGTCTGCTGCAACTGCAAGAATTCAACCAATGGATTGTGACGAAGAAAGTGGGGAACAATGCCTTCGACGAGAATAGTGAGACTCCATTGCTTCAAAAATCCAGGAAAAGGTTAATAAACAGAGTGAATCTGCCTGAGATCGGATTATCGGTGTTCCTCATCTTTTGTGCATCCTACAACCTTGTCTTCCATGGAAAGAACAGCTTCTACATAAATCTCTATCTCCAAGGATTAGCCTTCTTTCTTCTGGGGCTGAATTGCGTTGGCACTCTACCTGATCATTGCTGCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEAGEAAGAVLFLLAAAVSLLAAVSTGALDFTYLVTVVGEGSSTSPGSGGGAWWREAWVGARSRAVAPALQVGVWACMVMSVMLVVEATYNSPSASPQARRLRPERWFKWEPLGGGAGAGDEEKGEAAAAAYPMVMVQIPMYNELEVYKLSIGAVCGLKWPKERLIIQVLDDSTDAFIKNLVELECEDWASKGLNIKYATRSGRKGFKAGALKKGMEWDYAKQCEYVAIFDADFQPEPDFLLRTVPFLMHNQNVALVQARWVFVNDRVSLLTRIQKTFLDYHFKAEQEAGSATFAFFSFNGTAGVWRTEAINDAGGWKDRTTVEDMDLAVRATLKGWKFIYLGDLRVKSELPSTYKAYCRQQFRWSCGGANLFRKMIWDVLVAKKVSSLKKIYILYSFFLVRRVVAPAVAFILYNVIIPVSVMIPELFLPIWGVAYIPTALLIVTAIRNPENLHTVPLWILFESVMSMHRLRAAVAGLLQLQEFNQWIVTKKVGNNAFDENSETPLLQKSRKRLINRVNLPEIGLSVFLIFCASYNLVFHGKNSFYINLYLQGLAFFLLGLNCVGTLPDHCCF</aaseq>

Gene Sequence

<dnaseqindica>1..109#204..532#613..711#1835..2087#2345..2455#2538..2674#2750..2863#2944..3143#3247..3444#3552..3723#ATGGAGGCCGGCGAGGCAGCCGGCGCCGTCCTCTTCCTCCTCGCCGCCGCCGTCTCCCTCCTCGCCGCCGTCTCCACCGGCGCCCTCGACTTCACCTACCTCGTCACAGGTTCCAAGATTTTCTTTCCATTTTTATTTTCCCATCCAAGTTAATTAGCTTCTTGCTTTCAGTGAGCTGAGCTCTTGTCGTGGTACGTTCCCAGTCGTCGGCGAGGGATCGTCGACGTCGCCGGGGAGCGGCGGCGGCGCGTGGTGGCGCGAGGCGTGGGTGGGGGCGCGGTCGCGCGCGGTGGCGCCGGCGCTGCAGGTCGGGGTGTGGGCGTGCATGGTGATGTCGGTGATGCTGGTGGTGGAGGCCACCTACAACTCCCCGTCAGCTTCGCCCCAGGCTCGTCGGCTGAGGCCGGAGCGGTGGTTCAAGTGGGAGCCCCTCGGCGGCGGCGCCGGCGCCGGCGACGAGGAGAAGGGGGAGGCTGCTGCTGCTGCTTATCCCATGGTCATGGTCCAGATACCCATGTATAATGAGCTCGAGGTAATAACCAATCAATTCAACAAGATTCAAATTAGACACAAATACGGCCGAATTCAAATGTTTTGGATTCTTGGGTGTAGGTGTACAAGTTGTCAATCGGAGCAGTTTGTGGGCTCAAGTGGCCAAAGGAGAGGTTGATAATCCAAGTTTTGGATGATTCCACGGACGCATTTATCAAGGTATCTCTCCTTTTTCTTATTGTTAGGCAAGTTTCTGGCTGAATGATATGATTGAGATGTCCAAACTCCGGGTTTTTTTTTCGTCAGGAGCTTAGACCTCTGAAAATCTGTAATTAGTGTAGATTATCACTTTTTCTGTATGTTAGCTTAACGAGTTAGCATTGTTCCTGTGTGAAGACTGAAGAGTAATGAGTTGGATTAGTTGTACATAAGGATGACATTGCTTTTCACTTTCATATATCACTATCAGTATAAAAAGGAGCAAAAGCAACTAAGTTTCGTCATAGGAACCTAACCTTAAGTAGTTAACTGTCTTAGGTCCTAGGACTGAAAGCTAAGTCATGTGCCTGGACCATATGAAATGCACGTGATTACAGTGAAAGAGCATGTAGTCTAGTGGTTACAGTGACCTAAGTAGCATCCTAAAGTCCTGAGTTTAAATCTCCATAAGAGCGAATTTCAGATTGGGTTATTCGAGGGGCTAAGTTCTCAATTTGTAAGGTTGCATATATCTGGTTGGATGTAGAGGCCAGGTAAAAAAAAATACCCTTCTCTAAGAAAAATGAAATGCACGTCATTGATCATTACCTTTTAAAGAAAAGGATGACTACCTTTTAAAGAAAAGGATGACGACATACCCTGTAGCTGTAAAAAACATGATCACTGTCGTAAATGGTTAGTTTCATGTAAAGAAGTATTAGCTGATTCAAGTATCCTTGTCTAGACAATAAGTACTTAATCTTAAATAGTAATTTACTTGCATGAGACATCCTATTTGACGAACTACTATTTACATCAATTACCTTTGTGGCTTACTTTTTGTGTAAAAAGGCAGTTGTAGTTGGATAAAAGGCAGTTGCGGTCCGGATATCTCAGCATTTGGCATCTGGTGAACTGAATGATGTCACCTTTGACTGGCATGTGTAAATATTTTCTTATCCAAGCTGAAAAGTTATAAATTACCCAACTCAACCTCTAGTCGTCCTTAGTACATCTGTACATGTCATTTTAGTGTGCATATATTTGCAGTCCCTAGCACTTTGTTAACACAGAAGGGCAATAAATTAATCATCTACCTTGTGAAAATGTAATGAAAATGAACAAGAATTTACTTAATTTGCAGAATTTGGTTGAGCTGGAATGTGAGGATTGGGCAAGCAAAGGTCTAAACATTAAGTATGCCACCAGAAGTGGCCGCAAAGGGTTCAAAGCAGGAGCCTTGAAGAAGGGAATGGAGTGGGACTATGCCAAGCAATGCGAATATGTTGCCATATTTGATGCTGATTTCCAGCCAGAACCGGATTTCCTTCTCAGAACTGTCCCGTTCCTCATGCACAATCAGAATGTTGCGCTTGTACAAGCTCGGTGGGTTTTTGGTAAGACCTCATCTTTTGATATGTAATTGAGACTACCTTTTGCAGTTCTTGCTAGCGGGAAGTATTCAGTATATATTGGTAAGGTGACCAAAATTTTGCATTTGAAGTGGCCTTCTGTTAGCTCTTGATTCTTGTGGTGTTACAAAAGACAAAGATCGAAACAAATGGTTCTGTAGATAATATCACATCATTGAACTCTGATATAGCAATTTTATTTATTCTGATCTGTCCAATTTTTAGTTGACCGAATTTTACAGTGAATGACAGAGTAAGCCTACTGACAAGGATACAGAAGACATTCCTTGATTACCACTTCAAAGCTGAGCAGGAGGCAGGATCGGCTACATTTGCTTTCTTCAGTTTCAATGGTGCACACCTCGACTGTTCATGTTTTATGTAGATCACAAAAGGAACATGGTGATAGTCTCCTAAACACTGGTACCTTGTTAGGGACCGCTGGTGTATGGCGCACAGAAGCTATCAATGACGCAGGAGGTTGGAAGGATCGAACTACAGTTGAAGACATGGACTTGGCTGTCCGAGCAACCTTAAAGGGATGGAAATTCATCTATTTAGGGGACCTCAGAGTAAGAAGACCGAATCCTTAATTTGTTCTGTTCAATCACTCGACGATAGCATCTGATAAAGCAAATACGTCACAGGTAAAGAGTGAGCTTCCATCCACTTATAAAGCATACTGCCGACAACAGTTCCGGTGGTCTTGTGGCGGTGCAAACTTGTTCCGAAAGATGATATGGGATGTCTTGGTTGCCAAGGTACCATTTCTTCTCCTTTTTTGATGAACCAGAACAAGTAAATCTGCATAAAACATAACCTGCCACTGTTGCTCCGTCAGAAAGTGTCATCCTTGAAGAAGATCTACATACTGTATAGCTTCTTCCTGGTGAGGAGAGTTGTTGCCCCTGCTGTTGCCTTTATTCTCTACAATGTTATCATCCCTGTGTCGGTCATGATCCCAGAGCTCTTCCTGCCAATCTGGGGCGTTGCCTACATTCCTACAGCACTCCTGATTGTCACTGCCATAAGAAATCCAGAGTCAGTTCTCTCTTACAATCTTTGTTACAATTCTCAAACAGTTTGTTCATCGCTTTACCCTTTTGGATGAATTTGATTTGCCATAACTGTCTTTTCACTCCAGAAATCTGCACACAGTGCCACTGTGGATTTTATTCGAGAGCGTCATGTCCATGCATCGGTTGAGAGCTGCTGTAGCTGGTCTGCTGCAACTGCAAGAATTCAACCAATGGATTGTGACGAAGAAAGTGGGGAACAATGCCTTCGACGAGAATAGTGAGACTCCATTGCTTCAAAAATCCAGGAAAAGGTTAATAAACAGGTAAAATTTATTTCTCCAATTTGCTACTGCAATCTTTAGATAAGCTGGTAGTGGTAGGTGCTGGAGTTCTGCATGCATGCTTAACCTGACATTGTCATTTGCTGCAGAGTGAATCTGCCTGAGATCGGATTATCGGTGTTCCTCATCTTTTGTGCATCCTACAACCTTGTCTTCCATGGAAAGAACAGCTTCTACATAAATCTCTATCTCCAAGGATTAGCCTTCTTTCTTCTGGGGCTGAATTGCGTTGGCACTCTACCTGATCATTGCTGCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010638

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA010638&oldid=55461"