BGIOSGA010654

From RiceWiki
Revision as of 09:19, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010654| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010654, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010654

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010654, complete gene.

LocusTag

OSJNBA0090L05.18

Ensembl Transcript ID

BGIOSGA010654-TA

Ensembl Protein ID

BGIOSGA010654-PA

Length

3250

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16493747..16496996

Sequence Coding Region

16496920..16496996,16496601..16496840,16496371..16496485,16496195..16496268,16495100..16495257
,16493747..16493919

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16493747..16496996 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16493747..16496996 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGAAGAACTTCCGCAAGCGGAACCTCGAGGCGGACGACGCCGCCGACCACTCCGACGACGACGACGCCCGCCGCGTCGCCCTGGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGTTGGGCATCCCCGCCGCCGCCGCCGCAGCGGGCGCGTCGTCGGCGGCTTCTGCCGACGGGGCCTCCCCCCGCGGAAGAGGCGGCGGCGGCGGCGGAGGGTTAGCGGCCGGAGGGGATGCCGAGAAGGAGGACCTCGTCCTCCAGGACACCTTCGCGCAGGAGACCGCCGTCACCATCGAGGATCCCAACATGCTGAGGTATGTGGAGAACGAACTGTTGAAGAAGAGGGGCAAGAAGGTTGATGTGAAGGACAAGGAGGAGAAAGACCAGGTTGATGAGCTCTACATTGTGCCAGACCACCTCAAGGTTAGGAAGAAGAACTCGGAAGAGAGCTCAACGCAGTGGACCACTGGCATTGCTGAAGTTCAGCTGCCTATTGAGTACAAATTAAGAAACATTGAAGAGACCGAGGCAGCTAAAAAGATGCTACAAGAGAAAAGGCTTGCCGGTAAAACAAAATCAGATGCTAACATTCCGTCGAGCTATAATGCTGACTTTTTCCATCGCGGAAAAGATTACACCGAAAAGTTGAGAAGAGAGCATCCTGAACTGTACAAAGATCAAGGTTCACAGGCTAATGGAACTGGAGGTAAATCAATGGGTGGTAACCATCCAGATGGTGCTGGTGCAGGGCGGAGAGAAGCTGCTACTGATGAGTTGTTGCTTGAGCGTTTCCGCAAGCGTGAAAAATTCCGTGTCATGCGCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MRKNFRKRNLEADDAADHSDDDDARRVALEEIKYMQKLRERKLGIPAAAAAAGASSAASADGASPRGRGGGGGGGLAAGGDAEKEDLVLQDTFAQETAVTIEDPNMLRYVENELLKKRGKKVDVKDKEEKDQVDELYIVPDHLKVRKKNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKMLQEKRLAGKTKSDANIPSSYNADFFHRGKDYTEKLRREHPELYKDQGSQANGTGGKSMGGNHPDGAGAGRREAATDELLLERFRKREKFRVMRR</aaseq>

Gene Sequence

<dnaseqindica>1..77#157..396#512..626#729..802#1740..1897#3078..3250#ATGCGGAAGAACTTCCGCAAGCGGAACCTCGAGGCGGACGACGCCGCCGACCACTCCGACGACGACGACGCCCGCCGGTACCCCCGCCCCCCCCCCTCCCCGCTCCCGCCGCCGCGCTGCCTCTCGCTAACTGACTCCTCTCTCCCTCCCTCGCAGCGTCGCCCTGGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGTTGGGCATCCCCGCCGCCGCCGCCGCAGCGGGCGCGTCGTCGGCGGCTTCTGCCGACGGGGCCTCCCCCCGCGGAAGAGGCGGCGGCGGCGGCGGAGGGTTAGCGGCCGGAGGGGATGCCGAGAAGGAGGACCTCGTCCTCCAGGACACCTTCGCGCAGGAGACCGCCGTCACCATCGAGGATCCCAACATGTGCGTTTTTAACATCACGTGTGATTGTTCTTGCCAATCTGTTGTTTTCATTCATCTTTGATGATGCGGGAATTGAAGCGGAGCGTGTGTGCGTGCGTGGGTCTGATGTTTGAAGGCTGAGGTATGTGGAGAACGAACTGTTGAAGAAGAGGGGCAAGAAGGTTGATGTGAAGGACAAGGAGGAGAAAGACCAGGTTGATGAGCTCTACATTGTGCCAGACCACCTCAAGGTTGGTAGCCGAACAGAGCTTCGATGCACTCCTGAAAGGATATTTCATGGTTTTGATATGTGTGCATTGTAATGATGGTGCCAATCAATTTTTTGCTTATAGGTTAGGAAGAAGAACTCGGAAGAGAGCTCAACGCAGTGGACCACTGGCATTGCTGAAGTTCAGCTGCCTATTGAGTAAGTTCTTGTGCCCCTTCGTTTGTTCTTGTTTATAAAAGGTTCATTTGTTCATGTTTATAAAAGGTTGTTAAGGTAGTCTTCCATATTATGTTGTAATTCAAAGGGGAAGGTGCCCAAAATACTGCAATGCATCATAAGGAGATGTGCATATGGGCTTGTTAATAAGGATATTTATTAATTGACTAGCTGAATTCCTGTGCATTGCAACAGAATTTTGGAAAAGAAGAAATTCATTATACACATTTTAAATACCCTAAACAAATTTGCCACATTATTTTTCTCTAATCATCTAGATAGATGCTTTCGCCATCACCTTCACACGGGAATTTAGAAGACACATGTTACTACGCCCTAACAACAAGTAGCCCACCTATCAGGGAGTGGGTGGTGGTGGGCGGCAAATTCACCACTCAGCACCACCATTGGAGTCTTTTAAAATGGTATAGATAACTGAACCTACAAAACTCCCTACAAGTATGCACTGGTCTTATGGACATCTCTGTTGTACTTCTATTAAAAAAGTACAACTTTTCTTCTATCATACATGGGAATGATGTGATAATCCAATTGAGACTTTTTGGGACAGCATGATAGTTAGATAAGATAAATGGTCCAGTGGGATGTACAAACCTGTAACTGTTATTTTCAATCTAAAGTTCTAAACTGATCTATGCATACAATGGTGTGCTCGAATTATAATTCCTGATTTCAAAGGTCTCTGAAGGGTCAACAACTCAACATTGTACTGTCAGCATTGTGGGTTCAATATAACCTAAAAGGTTCCTGTTCCTCGTTAATATTCTCAAGGTTCTTGGTGCTATATATGTATATTAATCTATTATTCTGGTACTAGAGTCATGCACTCATGCGTTTCTTTAGAACTGGGCCTGCAGCTATATACAGATTCATGTTACCATCTTCTTGATTGTTGCAGGTACAAATTAAGAAACATTGAAGAGACCGAGGCAGCTAAAAAGATGCTACAAGAGAAAAGGCTTGCCGGTAAAACAAAATCAGATGCTAACATTCCGTCGAGCTATAATGCTGACTTTTTCCATCGCGGAAAAGATTACACCGAAAAGTTGAGAAGAGGTTTGTACATATACCTTTCAGTTTTCAGGTTATCATAACTAGTTTTACACTTGTAGTGTCATCACCAGAAACTATCGAGTCTTAAGTCTATCTGATATTGTAAGGCACATAATGCTCCCAGAGGAGTTTACCAGTCTAATAAACAGAAACGCCTTCAAAAAGTACTATATGTTTCTAATTGTGGTTTCTAGGAACGAATAATTTGTAAAAGTACAACTTTTTTTAATTTTATATTTACCTCGCACATAAAGTTAAATAACAGGTCAAGTCTATCAGAAATGTAGAATTGTAGACAGGCATAAATTTTGTCACTAGTACACTGCCGTAGTGCTGCACCAGTTCTTCAAATAAATATATATTCTATTTTTTATTTAAAAAGCCAAAACAACTATCTTCCAATCTAAAACTAAGTAAAACATGTTTTCCTGTAATCTACATATGCACACGTGTAAACGATGCAATTGGTTAAAAAAGGATCATGCAAATGAGTAATTCGTATGCATAAATACATAGATGATCAATGTAAAGCACACGAACACCATTATCGATTCCTCTTTTTTTTTTCATGAGTAAGAGAGAGATGCAAGGTATGCGCACACCAGTCTTATCAGATGCCAGCTTTATGTAACAACTGATGATTGGCACTAGATCTAAGCCATGAACAGAGCTTTCGAATGATAATTTGCATATCAGATATTCCTCTTGATTCACTTCAATCACCTGGGCCTGCTGCCAGCTTTTGACCAGTTGCAGAGCAACACTTCAATCACAACAACTTATTTCCAGTTTTAGTATACCGAATATAACTTTATTCTTAAGATATCCCTTTTTATTAAAAACAATTTGCTATATAAAGAAAACAGAGGTACCCAATGGACCTACAGCAGAAGTATTCAGGTTTTATATAAGAGTTTTGATCTTCAGCTGTCTTTAATACAGATCAATTGTTCCCCTCAATAGACCTGAATTTTAAATTAACATTGAAGGAATCCACTAATCGTTACATAATACAAATTGCAAATAGCCTGTGAAACAATCTATGCTGCATCAAAATCCACAAATATGGGAAATGTGATGGTAGCAATACCATTTTTGAACTTCTGTTTTAGAAACAATAGCTGTGGCATATCATTGATATAATTTATCGTTTAAGTGCTAAACTGTTCCATTTTCCTTGCAGAGCATCCTGAACTGTACAAAGATCAAGGTTCACAGGCTAATGGAACTGGAGGTAAATCAATGGGTGGTAACCATCCAGATGGTGCTGGTGCAGGGCGGAGAGAAGCTGCTACTGATGAGTTGTTGCTTGAGCGTTTCCGCAAGCGTGAAAAATTCCGTGTCATGCGCAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010654