BGIOSGA010714

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Revision as of 09:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010714| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010714, complete gene.| tag = OsI_116...")
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Gene Name

BGIOSGA010714

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010714, complete gene.

LocusTag

OsI_11618

Ensembl Transcript ID

BGIOSGA010714-TA

Ensembl Protein ID

BGIOSGA010714-PA

Length

4432

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15165917..15170348

Sequence Coding Region

15169995..15170348,15169629..15169755,15168882..15169330,15168459..15168680,15168069..15168377
,15167619..15167957,15167465..15167545,15167293..15167388,15166829..15167203
,15166518..15166649,15165917..15166087

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15165917..15170348 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15165917..15170348 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGGACGAAGCCCAGAGGGAAGCCGAAATCCAGGGCTCTGGTTGCCGGGGCAGCTCACGGGGGGAAGGAGAAGAAGGGCGTGACGGGCGGGGCGGGGAAGCGCGGGGACAGGCGCGGCGGCCGCCATGGCCCGCGCCTCCCCACGGCGCTGCGCCGGCAGCTCGACGCGCTGGGGCCCGGCACCTCGAGGGGTTCCGACGAGGACGAGGAGGCCGGGTCCGACGACGAGGGGGCACACGACGTGTACGAGTACGAGGAAGGGGTCCCCGAGGAGGAGGCCGGGAAGAACGGCCGCTACGACGCCGTCGAGAAGTACGAGTACGAGTTCGACAGCGACGCCTCCAATGCGGATGAAGACGTGCCATCAGATGAAGGTGAGGATATGGAGGAAGATGATGCCGGCGAGGATGAAGATGAGGAGAAGCAGATAAGAATACTTCAGGAGACGACTGGCATGCCTAGGGAAGCGTTTGATGGGGGTAAGAGGAAGAAACAGCCATTGGAGCTGCCGTTTCAGCCTGGAGTTGGAGATGGTCCAGTCACAATTCATGATCTCTTGAATAATATTCAGGGTAAGCCTGGGTATAGCAAGCTCCGAAAGAGGCTGCAACAGCAGGAGAAAAAGCCAATAGTCGTGCAGGCCCCACTTGCAAAAGTGGAGAGAGAGAAGCTCGAGCGTGGTGTGGTATACCAGCAATCCAAGAAGGAGGTCACCAAGTGGGAGCCATTAGTTAAGAGGAACCGTGAGGCACCCACACTCTACTTTGAAAATGATCTCAACTTAGGGGTTAACACAGTTGGGGCAATAGCTAGTGAATTTAAACCAAGAAATGAATTTGAGAAGCAGATGGCTGAGATTATGCGTAGCACAGAAATGATGGAAGCACACAAGAACGATGGTGTTAAAATACTGGAACTTAACAAGATTGACATGGAAGATGTGAGAGAACGTCAAAATCGACTTGCTAAAATGCGCAGCCTTCTGTTCCGTCATGAGATGAAAGCAAAACGGATAAAGAAGATCAAGTCCAGGACTTATCACCGGATGTTGAAAAAGGATAAACTGAAGGCAGCATCAGCAGACTTTGAGGCAGATCCGGAAGCTGCCAAAGAGCATGCTATGAAACAGGAATTTAAACGTGCAGAGGAACGAATGAGATTAAAGCACAAGAATACTTCCAAATGGGCTAAGCGAATCTTGAAGCGTGGATTGGATGTTCAAGATGAAGGCACTCGTGCTGCTATTGCAGCACAACTCCAACAAAATGCTCTTCTTACTAGAAAAATGAATTCCACAAAAGACGATTCTAGTAGTAGTGAGGAAAGTTCTGATGATGAGGAAGATGACGATGAATCAGAAGCAAACATTCTGAACAAAGGAAAAGAAAAGATTCTTAAAATTCTTGGGGATGATAATGAGATACCAACATCTGGAGTCTTTTCGTTGCCTTTCATGGAGCGCGCTATGAAGAAGCATGAGGAAGCAACTTATGAGGAAGCACGGCTAGCTCTAGAAGAGTGTGATGAATCATTGAGGAAATTGGAGGATGGTAACACTGAAGAGAATGGAGATTCAGTGAAGGTTACTGGTAAAAGAACTTTTGGACCTGCCGAAGATACAAACAAAGTGACAAATAAGAAGCAAAAATTAGATGACGGCGACAAGAACAGTGATAGCGAATATGAGTCTGACTCTGCTCAACATCTGGATGACAATGAAGTACATAAGATAGATGATGTGCAAATTGGGACTGCACTCCTGGATGATGATGAACCACAGGATGATCTGTTCAAAAGCTTCGATGATATTATAAAAAATCCTGGCCGCAAAACAACTGTTGAAGTTGGAATGTTAGCTGATAATTCATGGAAGAAGTTCAAGAGTAGCAAAGGAAATGATGGGAGCAATACCAATGGTGATATAGATAAATCCACAGTGAAGGTTTCTTATATGGCAGACCAAAAGCTTAAGCAATTGGATCACAATTCTGATTCAGATTCGGAGGATGAGATGGTTGAGGGTTTATTGACCATCTCCGATGCAAAGGAAAATTATAAAATTCCGTCGCAAGCTGATCTTATACGCCAGGCTTTTGCTGGTGATGATGTTGAGGCTGAATTTGAGAAGGACAAACTGGATGTTTTAAATGAAGAGAATCCTGAACCTGAAAAACCTGCTCTTGTTCCTGGTTGGGGACAGTGGACTGACATTCAACAGAAAAAAGGACTTCCTTCTTGGATGGTGAAAGAACATGAAAATGCGAAAAGGAAGAGGGAAGAAGCCTTGAAGAGGAGGAAGGATGCTAAGCTCAAGCATGTTATCATTTCTGAACATGTTGACAAGAAGGCTGAAAAGCTTTTAGTGAGGAATCTGCCTTTTCCTTACACTTCAAAGGATGTATATGAGCAGAGTATCCGTATGCCTATTGGACCTGATTTCAATCCAGCGATATCAGTTGCTGCTCTCAATCGACCTGCGATTGTTAAGAAGCCTGGAGTTGTTATCAAGCCAATACAATATGAAGAGGTTGATCCCCATGAGAAGCCTGATGAACCGAAAAGGGTCATCCAGAGAGCTGTTCCAAACCCCAAAGCAAAGAGAACCTCTGCGAAGCAAGCAAAGGCGATAGCTTCAAATAAGAGGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGTKPRGKPKSRALVAGAAHGGKEKKGVTGGAGKRGDRRGGRHGPRLPTALRRQLDALGPGTSRGSDEDEEAGSDDEGAHDVYEYEEGVPEEEAGKNGRYDAVEKYEYEFDSDASNADEDVPSDEGEDMEEDDAGEDEDEEKQIRILQETTGMPREAFDGGKRKKQPLELPFQPGVGDGPVTIHDLLNNIQGKPGYSKLRKRLQQQEKKPIVVQAPLAKVEREKLERGVVYQQSKKEVTKWEPLVKRNREAPTLYFENDLNLGVNTVGAIASEFKPRNEFEKQMAEIMRSTEMMEAHKNDGVKILELNKIDMEDVRERQNRLAKMRSLLFRHEMKAKRIKKIKSRTYHRMLKKDKLKAASADFEADPEAAKEHAMKQEFKRAEERMRLKHKNTSKWAKRILKRGLDVQDEGTRAAIAAQLQQNALLTRKMNSTKDDSSSSEESSDDEEDDDESEANILNKGKEKILKILGDDNEIPTSGVFSLPFMERAMKKHEEATYEEARLALEECDESLRKLEDGNTEENGDSVKVTGKRTFGPAEDTNKVTNKKQKLDDGDKNSDSEYESDSAQHLDDNEVHKIDDVQIGTALLDDDEPQDDLFKSFDDIIKNPGRKTTVEVGMLADNSWKKFKSSKGNDGSNTNGDIDKSTVKVSYMADQKLKQLDHNSDSDSEDEMVEGLLTISDAKENYKIPSQADLIRQAFAGDDVEAEFEKDKLDVLNEENPEPEKPALVPGWGQWTDIQQKKGLPSWMVKEHENAKRKREEALKRRKDAKLKHVIISEHVDKKAEKLLVRNLPFPYTSKDVYEQSIRMPIGPDFNPAISVAALNRPAIVKKPGVVIKPIQYEEVDPHEKPDEPKRVIQRAVPNPKAKRTSAKQAKAIASNKRK</aaseq>

Gene Sequence

<dnaseqindica>1..354#594..720#1019..1467#1669..1890#1972..2280#2392..2730#2804..2884#2961..3056#3146..3520#3700..3831#4262..4432#ATGGCTGGGACGAAGCCCAGAGGGAAGCCGAAATCCAGGGCTCTGGTTGCCGGGGCAGCTCACGGGGGGAAGGAGAAGAAGGGCGTGACGGGCGGGGCGGGGAAGCGCGGGGACAGGCGCGGCGGCCGCCATGGCCCGCGCCTCCCCACGGCGCTGCGCCGGCAGCTCGACGCGCTGGGGCCCGGCACCTCGAGGGGTTCCGACGAGGACGAGGAGGCCGGGTCCGACGACGAGGGGGCACACGACGTGTACGAGTACGAGGAAGGGGTCCCCGAGGAGGAGGCCGGGAAGAACGGCCGCTACGACGCCGTCGAGAAGTACGAGTACGAGTTCGACAGCGACGCCTCCAATGCGGTAACGCGCCACTCCCTCTCCTCTCCTCTCCTCTCCTCTCGGCATGGCGGTTTCGATGTAGGATGCGGCATAAACCGCGAGCTTCGAGAGTAATTTGGTTTGAGAGAAGCTTGTTGCGAGTCGATTGATGGGAGAGGTATTCTTGGGTTGAAGGTGGCGTGAAATTACATCCACACTAGGAATCATGGCGCTGCCAAGCTGCAAGTCTTTGCAGTAACTTGTTTTGTTTGCATTTTTAGGATGAAGACGTGCCATCAGATGAAGGTGAGGATATGGAGGAAGATGATGCCGGCGAGGATGAAGATGAGGAGAAGCAGATAAGAATACTTCAGGAGACGACTGGCATGCCTAGGGAAGCGTTTGATGGTAACATTTCTTTTTGTCTTTGGCGCCTATCAAACAGTTGGATGTGAGATTTTTTAAACTCATAGCAGAAAAGTTCAGTCTTTGGTAAGGAATGTTGAATTGCCTAACAAGGTTGCTTCTGTGTATAATTAATAGTTCAACATCCTGAACATTGATTGCCTAGTCCTGGTTGGTCTTTTGAAAATAAACTGCGAGAAATGCCGATTATTTGTAAATGTCAGAAATTTAAAAGTTAACAACAAATCCAGTTGACCCGTGTCATTCTTAGTTCAAATACCTCTTTTCTAAATTCTTGTAGGGGGTAAGAGGAAGAAACAGCCATTGGAGCTGCCGTTTCAGCCTGGAGTTGGAGATGGTCCAGTCACAATTCATGATCTCTTGAATAATATTCAGGGTAAGCCTGGGTATAGCAAGCTCCGAAAGAGGCTGCAACAGCAGGAGAAAAAGCCAATAGTCGTGCAGGCCCCACTTGCAAAAGTGGAGAGAGAGAAGCTCGAGCGTGGTGTGGTATACCAGCAATCCAAGAAGGAGGTCACCAAGTGGGAGCCATTAGTTAAGAGGAACCGTGAGGCACCCACACTCTACTTTGAAAATGATCTCAACTTAGGGGTTAACACAGTTGGGGCAATAGCTAGTGAATTTAAACCAAGAAATGAATTTGAGAAGCAGATGGCTGAGATTATGCGTAGCACAGAAATGATGGAAGCACACAAGAACGATGGTGTTAAAATACTGGAACTTAACAAGGTGACTTTCTTATATTCTTTCGATCCGTTAGTTCAATTGAATTTAGCATGCAGTTTTAGTTGGTTTCGCTGACCGTGCATGTTGACTGATTGTAGTGTGTAATTCAAGCTTGAGGGCATTGCTCTTGCTAAGCAAGTGATTATATTGTAATTTTCAGACTTCTGTGAACGATTTGCTTAATAGGTTCATAATCTCATGTAGATTGACATGGAAGATGTGAGAGAACGTCAAAATCGACTTGCTAAAATGCGCAGCCTTCTGTTCCGTCATGAGATGAAAGCAAAACGGATAAAGAAGATCAAGTCCAGGACTTATCACCGGATGTTGAAAAAGGATAAACTGAAGGCAGCATCAGCAGACTTTGAGGCAGATCCGGAAGCTGCCAAAGAGCATGCTATGAAACAGGAATTTAAACGTGCAGAGGTTAGTTATTTTCTAGTTTATTTCTCATTTTTCAAGCTTGTTTCATATGTGTTCCTATTAGACTGACCAACTTATTTGCAGGAACGAATGAGATTAAAGCACAAGAATACTTCCAAATGGGCTAAGCGAATCTTGAAGCGTGGATTGGATGTTCAAGATGAAGGCACTCGTGCTGCTATTGCAGCACAACTCCAACAAAATGCTCTTCTTACTAGAAAAATGAATTCCACAAAAGACGATTCTAGTAGTAGTGAGGAAAGTTCTGATGATGAGGAAGATGACGATGAATCAGAAGCAAACATTCTGAACAAAGGAAAAGAAAAGATTCTTAAAATTCTTGGGGATGATAATGAGATACCAACATCTGGAGTCTTTTCGTTGCCTTTCATGGTGCGCTTTTGTTGCCATTCTCTTCGTGCATTTGTTTAGTAAAATTATTTGCTAACATTGCTGAAATCACTGCATTTTTAATTGATACTGACATTAGCTGCTTGTCTACAGGAGCGCGCTATGAAGAAGCATGAGGAAGCAACTTATGAGGAAGCACGGCTAGCTCTAGAAGAGTGTGATGAATCATTGAGGAAATTGGAGGATGGTAACACTGAAGAGAATGGAGATTCAGTGAAGGTTACTGGTAAAAGAACTTTTGGACCTGCCGAAGATACAAACAAAGTGACAAATAAGAAGCAAAAATTAGATGACGGCGACAAGAACAGTGATAGCGAATATGAGTCTGACTCTGCTCAACATCTGGATGACAATGAAGTACATAAGATAGATGATGTGCAAATTGGGACTGCACTCCTGGATGATGATGAACCACAGGATGATCTGTTCAAAGTAAGAATTCTAAGCAACTTGTTATTGTATCATATAATTTTTGCAGAACCTGAATGCGATCTACTTTCTGTAGAGCTTCGATGATATTATAAAAAATCCTGGCCGCAAAACAACTGTTGAAGTTGGAATGTTAGCTGATAATTCATGGAAGAAGGTAACTCGTGCTGGCAGTTCTTTGATTAGTTGCTATATTTTATTTTTCATCTGTTTAATCTCTCGTTCTCCATCAGTTCAAGAGTAGCAAAGGAAATGATGGGAGCAATACCAATGGTGATATAGATAAATCCACAGTGAAGGTTTCTTATATGGCAGACCAAAAGCTTAAGGTCTGCTCTAACTGGTTTGTATTCTTATTTGTACATTCAGTCTATAAATCTTACTCATTTATCTTTTTTTTCTGTTTTTCTTCTTGTAGCAATTGGATCACAATTCTGATTCAGATTCGGAGGATGAGATGGTTGAGGGTTTATTGACCATCTCCGATGCAAAGGAAAATTATAAAATTCCGTCGCAAGCTGATCTTATACGCCAGGCTTTTGCTGGTGATGATGTTGAGGCTGAATTTGAGAAGGACAAACTGGATGTTTTAAATGAAGAGAATCCTGAACCTGAAAAACCTGCTCTTGTTCCTGGTTGGGGACAGTGGACTGACATTCAACAGAAAAAAGGACTTCCTTCTTGGATGGTGAAAGAACATGAAAATGCGAAAAGGAAGAGGGAAGAAGCCTTGAAGAGGAGGAAGGATGCTAAGCTCAAGCATGTTATCATTTCTGAACATGTTGACAAGAAGGTAAAGTGTTTGAATTATTATAGAGCTGCAGTAAACAACACCGTTTTCCTGTTCAATTCTGTAGCAATTTAGCAAACTTCTCTCTGGTGTGATGTTCCATTGTGCTGCACGCCTGTTTTACTGATGTCACTTGCACTATTAATGTGAGCAGTAAATCTGACCACCCCCTCTCTTTGCAGGCTGAAAAGCTTTTAGTGAGGAATCTGCCTTTTCCTTACACTTCAAAGGATGTATATGAGCAGAGTATCCGTATGCCTATTGGACCTGATTTCAATCCAGCGATATCAGTTGCTGCTCTCAATCGACCTGCGGTGAGTACCGTATAACTAGCTGATGCATTGAACTTGTAGTTGAAATCAAATTGGTGATTCATCAAAAAAAAAACCTAGATTTGAAGTTATTATTCTTGCTTTGCGACTTTGCGTTGGCCAGTTGGACCATTCTATAAATTTGACAGCGAGTACAGTGAGATTCCATTTTATGTATGTCATACTGCAGCTCATTTAGGTGTTTTTTTACTTGTCAGACACTTGAACATTATGAATAGCAATGATAAATGCTGGTAAAACTTTTACTTCGGGATCTTAAACATTATATCTTACAAAAAAAACCTGCTGGACATCTCCTGCCCTCCAGGCCTGATTATTTAGTCAAACGGTGGCTTTAGTCGTCGTAAACCTATACAATGCCCCTCGATCTATATATATACTTCTTCTTACTGCTATATATTACATCTTTCAGATTGTTAAGAAGCCTGGAGTTGTTATCAAGCCAATACAATATGAAGAGGTTGATCCCCATGAGAAGCCTGATGAACCGAAAAGGGTCATCCAGAGAGCTGTTCCAAACCCCAAAGCAAAGAGAACCTCTGCGAAGCAAGCAAAGGCGATAGCTTCAAATAAGAGGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010714

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA010714&oldid=55537"