BGIOSGA010718

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Revision as of 09:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010718| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010718, complete gene.| tag = OsI_116...")
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Gene Name

BGIOSGA010718

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010718, complete gene.

LocusTag

OsI_11611

Ensembl Transcript ID

BGIOSGA010718-TA

Ensembl Protein ID

BGIOSGA010718-PA

Length

4749

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15092177..15096925

Sequence Coding Region

15096729..15096925,15096428..15096542,15096108..15096311,15095837..15095965,15095600..15095740
,15094655..15094849,15093795..15093922,15092504..15092609,15092177..15092215

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15092177..15096925 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15092177..15096925 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCTTCCTAGCTCCGGCGGCCCGGCCCACAACGCGAGCCTTGGACCTGCTCGCACATGGACCTCCTCCCTCTTCGCCCGCCGCGCCGGCGACCCCTCCGCCGCCATCGCCGGCTTCCAGCGCCGCCTCTACGGAGGCCACCGGCGCCCCGATGTCCCTCTCGCCGGCGGCAGTCTCGCCGATAGCTACGCCGAGCGTAGGGTTGAGATTCCCAAAAGTTTCGTCATACTAGAAGATATTCTGCAACACACCCTGTCTAATATGCACAGTATCCAGGAAAGCATACTGTTCTGGCAGTCCAATGCTCTGAGAACAAATTCGCAGAAAGCGTATTTTATGATCTTTCAAAGAGGTCCAAGGGCCTTTGTTGCAACAACATGTCAAACGCTGGCTAAACTTCAGAACAAAGGGAGTCCAGTCCAGGGCCTTTTGGACTCTGCATCTTCTATGTTCTCAACAAAACTTGCCATCCTAACAAGGATGCAACACTGCTTGGCTTCTTTTCTTGCTGAGGTTTACAATGAAACTGACAAACGCAGAAGTGTATTAATTAGAAGATCAGAACAATCGCTGCATAGTCTCTTCGTTGCTCTGAATAACATCTTCTCCAATTTGGAGGTAGAACTTAGAAATGCTGGTGAGCCGGGGGCTGTATTAGCGAATCATGATAATAACTCATTCGAACTCTTCCAAAGATTGCCAGAAGCTGATGTTCAGAGTTCAGCTGCTATAAGTTTGATCTATGAAAACCTTCAGAAGTTAGATATTTTTCTTTCCTCTCGGCTTTCAAGCCATAAAAAGCCGAGAAAAATGACCAAATATTGGTTACCCTACACATTTGGAGCATTGGGCCTCTCTGCATTTACCCTATGGCTTTTACGCCACAGTAGCTTGATGGGAAGTTCTGACATTGACAACTGGCTTCATGGTGCTAAAAAGTTGCTGGTTTGGTGTTGGGATGAGAATGTTCAGAAACCAGTCAGTTCTATAAGGTATCTCACCAATACACTCCAGCAAAGCAAAGGTGTAACAGGAAAACAATATATCCAATTCCCTGAAGATACATTAAGCAAATGCAGGAACATATCGTCTTCTCTCTGCGAAAGGGTAATGCCGGAATTAGAACATGTTCTTAGGGTACAGCAGGTTACTCTTGCATTTGGTCGATGGCTTCTTCTGCCGGTACTTCTAAAGCCAGCAAGGGTTGTCCATGGTCAGGTTACACAGAGAAGAGATAGAATGACATCTTAA</cdnaseq>

Protein Sequence

<aaseq>MGLPSSGGPAHNASLGPARTWTSSLFARRAGDPSAAIAGFQRRLYGGHRRPDVPLAGGSLADSYAERRVEIPKSFVILEDILQHTLSNMHSIQESILFWQSNALRTNSQKAYFMIFQRGPRAFVATTCQTLAKLQNKGSPVQGLLDSASSMFSTKLAILTRMQHCLASFLAEVYNETDKRRSVLIRRSEQSLHSLFVALNNIFSNLEVELRNAGEPGAVLANHDNNSFELFQRLPEADVQSSAAISLIYENLQKLDIFLSSRLSSHKKPRKMTKYWLPYTFGALGLSAFTLWLLRHSSLMGSSDIDNWLHGAKKLLVWCWDENVQKPVSSIRYLTNTLQQSKGVTGKQYIQFPEDTLSKCRNISSSLCERVMPELEHVLRVQQVTLAFGRWLLLPVLLKPARVVHGQVTQRRDRMTS</aaseq>

Gene Sequence

<dnaseqindica>1..197#384..498#615..818#961..1089#1186..1326#2077..2271#3004..3131#4317..4422#4711..4749#ATGGGCCTTCCTAGCTCCGGCGGCCCGGCCCACAACGCGAGCCTTGGACCTGCTCGCACATGGACCTCCTCCCTCTTCGCCCGCCGCGCCGGCGACCCCTCCGCCGCCATCGCCGGCTTCCAGCGCCGCCTCTACGGAGGCCACCGGCGCCCCGATGTCCCTCTCGCCGGCGGCAGTCTCGCCGATAGCTACGCCGAGTGAGAAACCCCCTCCGAAAATTATATGTTAGCGAATTTATTTGATTGATCGATCTATCTGTTTATATGTGGCATTGATGTGATGATCAGGCCTTGATGAGATTAGGGCCTTTATATATTAATTAATCTGTTTCTGTGGCATCGATGCCTTTTCTTTTTTCTTTTTAATTATTATGTTATTTGCAGGCGTAGGGTTGAGATTCCCAAAAGTTTCGTCATACTAGAAGATATTCTGCAACACACCCTGTCTAATATGCACAGTATCCAGGAAAGCATACTGTTCTGGCAGTCCAATGCTCTGGTATTTTTACGCCGCAAACCCTTTCTTTTCCTAGACTCCCAGTATTTAGATATGATTCTTGCATTTATCTATCTGCCATTTACCTATACTTGGAATTGTTTCTCTTTTCTTTTCAGAGAACAAATTCGCAGAAAGCGTATTTTATGATCTTTCAAAGAGGTCCAAGGGCCTTTGTTGCAACAACATGTCAAACGCTGGCTAAACTTCAGAACAAAGGGAGTCCAGTCCAGGGCCTTTTGGACTCTGCATCTTCTATGTTCTCAACAAAACTTGCCATCCTAACAAGGATGCAACACTGCTTGGCTTCTTTTCTTGCTGAGGTTTGTTTACTAAAATACCAATATTAAAAAGCTTTTTTCAAAGTCCTGGTCTCTTCCCAAAAACTGAGGCATGGTCAGCTTCACAGCCAGCTGTTGGTATGGCATATATGAACTTAAATTCTACCTTTGCTTTTTTCCATAGGTTTACAATGAAACTGACAAACGCAGAAGTGTATTAATTAGAAGATCAGAACAATCGCTGCATAGTCTCTTCGTTGCTCTGAATAACATCTTCTCCAATTTGGAGGTAGAACTTAGAAATGCTGGTGAGGTATGAAATGTTTTTTTCTTTTTAACTTAATTCGAGATTCTAGGTGTAAATCTTTCTTTGTTGTTTTCTAATATGGTCTCGGTTTTTCTTTTCCAGCCGGGGGCTGTATTAGCGAATCATGATAATAACTCATTCGAACTCTTCCAAAGATTGCCAGAAGCTGATGTTCAGAGTTCAGCTGCTATAAGTTTGATCTATGAAAACCTTCAGAAGTTAGATATTTTTCTTTCCTCTCGGGTTTGCAACTCCCCCCCTACTACACTTTCACACGTGATTTTTTTTTCACTTGTCAGCCTCGCAGTTCCCAGATTACTGTTACCTGTATTTTAATTGGGACATTAAGGCTGTGTTCATTTGGATTAATATGATTATTTCAAGCAACTTTCCTATAGTTTTTTTTTGTTGCAAAAAGTATATTATTTAACAGTTTGAGAAGCGTGTGCACGGAAAATAAGAAAGCCAAAGTTGGTAAGGGGGAGAAATGAACGCACCCTCAGGATTCAATGTTGTACCCAAGTTTTTTTTGGCTACTAGTTTGTGCTTTCAGTCGAAACTCAAAAAAGTATTTTTAGGCATATGCAAGTAAACCAAAAACTGTTCCATACATGAATGGTTTCAAATGAGAAATCAGTGCTACTGCTAATTATTCTAAAGTACCAAAAACATTTTTGGGTGATTACGGAAAATCTCCCACTTGAGGCATCAAAATCAACTAATTAATCATGTGGATAATTGACAGTGTTAAATCTTGTACATCAATATCAGATTTAGTAGTCTAGCAATCCTTTTTACATAATTCACCTATTTATTTTATTTTTTATGTTAGAAAACTATATGTGGGTCTTGTACTCTTGTTCATCTCACAAAAGTAGATCTTCCGGTGCAGTTCTTAGAAGATATCTATATGTTGCTTATAATTTCATTATGCTAAGAAATGTGTTGCTTATTTATCTGAATTCTGAAGCAAGTAATTTTATGCAATGCTAGCTTTCAAGCCATAAAAAGCCGAGAAAAATGACCAAATATTGGTTACCCTACACATTTGGAGCATTGGGCCTCTCTGCATTTACCCTATGGCTTTTACGCCACAGTAGCTTGATGGGAAGTTCTGACATTGACAACTGGCTTCATGGTGCTAAAAAGTTGCTGGTTTGGTGTTGGGATGAGAATGTTCAGAAACCAGTAAGATACTCTATCTATATTCTATTTTTTTTTATTTATTTTGTGCACAATGGTAGTGCAAATTACTCCCTTTGTTTTTAAATATTCAAACTTTCAAAGGTTTAACTGGATCTTGTCCAAAAATCAAGTGTTTGTGACCGGAGAGAGTGGTTGGTTGGATTCGCAGTCAGTTACTCCCTTCGTTTTTTTGATAAATGACGATCAAACGTTTGTCCAAAAATCAATAGCGCCGTGTATTAAAAAACGGAGGGAGTAACTGATTGTGAATCCAACTACTCTCTCCGGTAACCAATACTTGATGTTTTTTTGGACAAGATCTGGTCAAACCTTGAAACCTTTTAAAATAGTAATTAGTTTTAAAACATAAGATTGATTTGTGTAGATTTGTCTTCAAAAGTATTTTCACAATCACAGTTCTAAATTTCTAAAAATAAATTGTGTCTAAGTCACACCTCGAAGACCATGAAAGAAAAATGTCAATGTCATGCACTTTTTACTGAAAGAAAAAAAAAAGATCATTCTCTAGTTATCTCAAACGGTTCATTTAATTTTCATGTGTAACCACTAAATTTTGGAAGTGTTGCTACAACAAGCTCGTCCAAGTTTCCATATATTTATCCACTATCAAGATGAACATAATGATCTGTCTAGTTGTTCGAATTTGGAAATTAGTACTTTCTGTTGTGTCACTGACCGCACGCATGACACGTTTTTTCTATTATGGATCTTTAGGTCAGTTCTATAAGGTATCTCACCAATACACTCCAGCAAAGCAAAGGTGTAACAGGAAAACAATATATCCAATTCCCTGAAGATACATTAAGCAAATGCAGGAACATATCGTCTTCTCTCTGCGAAAGGTAATACCTGGTTTACATTTGAGTTTCTGATTGAAAATAAAATAATAAAATGTTCCCTTAAGGGGTTATGAGAAATCCCTATGCAGGGGCGGATCCAGGATCAAAAAAATTGGGGGGGACTCAATTACACAGTTTCTTCAACCTCCAGCCATCTAGGGACCTTTAGATTACCATTCATGGTGAAAAAATTAAAGGAGGTGCTCGAGGGGTATCCATGGGTCTTGTGGGTGTAGGGAGTCCCCCCTACACCCACGTTGGATCCGCCCCTGTCCCTATGTGTAATGGCATATTAATACATAAGACTTGAAAAGGTTTTCTGGTGGTCAATAGAGTCCCTGGTAGTCACTTTGTAGTCAATAGAGTCCCATTTCTAGAATTGGTTATCTTTATAGAAGTTAAATTTCAAAATCGATTCAACTCAATATTTAAAGTAGAAAATTTCCAAATGGACTTGATGTCAATATTTGCCGAAAATCAATTCAAAATCAATCTTTCTTTGTCGTGCATAGCAATTTGCAGTTTCATCTTGTAGAATTCTTATTTGACATTACAGTTTTGAGTTATTTGAGAACCTGTTTGAACCATTGAGTGTCATGGTTGCTGAATCCACTTTCTAATAATGTACACAAGGCAGTTAGGAATAGACCTTTATAGCGTCTCTCGTATCGTACGTCCATGAAGCTATATGTCAAATTTTGATCCAAATAATGTCACTATCTAATCACTAATTAGGATGGCATTCAATTGCAATACCATCTGCCGGAGAATAATTATGATATGTACACGTTATTTAGCTATTCCGAATTACTCTATTTTGGGTGATCCTCGAACAATTGTTTTCTCTATCGTGCTCAATTGAAAATGTGAGTATGTTTGATCATTCAGCTATATTCTATGCATATTAAGTGCAGGTATGAGATGGAACCAGGATCTCCTGAAGAATTAGCATGTCTCATGATTAATCAGGTTATTTTCCTTCCTTGTGTACATATATTTGCATTTAATAAATTCAGGTCGCTTTTTTCTCACCAACTTTGAAATTTCAGACTAAGAAGTTTTTACGGGATTTTAAAGAGTAAGTTAAACTATTCATGTCTGACAAATATATATTGGTAAAAACACACAGAAAACTCTTATCTAGTATAAGTATTCACCAGCTGAGTTTGTTGGATTGTTCTTGCACAGGGTAATGCCGGAATTAGAACATGTTCTTAGGGTACAGCAGGTTACTCTTGCATTTGGTCGATGGCTTCTTCTGCCGGTACTTCTAAAGCCAGCAAGGGTTGTCCATGTACGTTTATTCCAATGTTTACTTTCTTCTCAATATCACTTGCCTAAGTAGTGTATTATCTCCGTCCCAAAATAAACTAACCTAGACGACGATGTAACATATCATAGTCTAGCTATCTATATTTATTGTATTAGGATGTATTATATTATCTTTGAGATTTGTTTATTTTGAGACAGGCCTCAGTATGTTCTACTCTATTATCTGTGTGCCTGGCATCTGTTGTGAAAGGAGTACAAGTGTTACCAGGCTTAACATATAACTGTTGACCTCTGGTTATCTATACAACAGGGTCAGGTTACACAGAGAAGAGATAGAATGACATCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010718