BGIOSGA010723

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Revision as of 09:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010723| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010723, complete gene.| tag = OS03G03...")
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Gene Name

BGIOSGA010723

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010723, complete gene.

LocusTag

OS03G0355600

Ensembl Transcript ID

BGIOSGA010723-TA

Ensembl Protein ID

BGIOSGA010723-PA

Length

5786

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15015483..15021268

Sequence Coding Region

15021182..15021268,15019852..15020049,15019614..15019727,15019274..15019524,15019051..15019186
,15018478..15018657,15018301..15018393,15017818..15018029,15017630..15017693
,15017379..15017558,15016989..15017081,15016508..15016899,15016201..15016390
,15015913..15016116,15015483..15015779

Genome Context

<gbrowseImage1> name=IndicaChromosome03:15015483..15021268 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:15015483..15021268 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGGGCACGACTCCAAGTACTTCTCCACCACCAAGAAGGGGGAGATCCCCGAGCTCAAGGAGGAGCTCAACTCCCAGTACAAGGATAAGAGAAAAGATGCTGTCAAGAAAGTTATCGCTGCTATGACTGTTGGAAAAGATGTTTCATCTTTGTTTACCGACGTTGTGAACTGCATGCAGACTGAGAACTTGGAGCTGAAGAAACTAGTATATTTATATCTGATTAACTATGCCAAAAGTCAACCTGACCTTGCCATACTTGCTGTAAACACATTTGTTAAGGATTCACAAGATCCAAATCCACTGATTCGTGCTTTAGCTGTGAGGACAATGGGTTGCATCCGTGTGGACAAAATCACAGAGTATCTCTGTGATCCTCTTCAAAGATGCCTCAAGGATGATGATCCGTATGTACGGAAGACTGCAGCTATTTGTGTTGCTAAGCTTTATGATATAAATGCTGAGCTAGTTGAGGACAGAGGATTCCTAGAGGCCCTTAAAGACTTAATATCTGACAATAATCCTATGGTAGTTGCCAATGCTGTTGCTGCGCTTGCAGAGATTCAGGACAGCAGTACTCGTCCAATCTTTGAAATCACCAGTCATACGCTGTCAAAGCTTCTGACTGCTCTGAATGAATGCACAGAATGGGGCCAGGTTTTTATTTTGGATTCTCTGTCAAGGTACAAAGCAGCAGATGCCAGGGAAGCAGAAAATATAGTGGAACGGGTTACACCCCGTCTGCAACATGCAAATTGTGCTGTTGTTCTCTCTGCTGTAAAGATAATCCTTTTACAAATGGAGCTCATTACTAGCACAGATGTTGTCCGTAATCTCTGTAAGAAAATGGCACCCCCTCTTGTTACGCTTTTGTCAGCAGAACCTGAGATTCAGTATGTAGCGTTAAGGAACATTAATCTGATTGTTCAGAAAAGGCCTACTATACTTGCACATGAAATTAAGGTCTTCTTTTGCAAGTATAATGACCCAATATATGTTAAGATGGAAAAGCTGGAGATTATGATAAAGCTTGCCTCTGACAGAAACATAGATCAGGTTCTATTGGAATTCAAAGAGTATGCCACAGAGGTGGATGTTGACTTTGTCCGCAAAGCTGTTCGTGCTATTGGAAGATGTGCAATTAAGTTGGAGAGAGCTGCTGAAAGGTGTATCAGTGTTTTGCTTGAGCTGATTAAGATAAAGGTTAATTATGTTGTGCAGGAGGCTATAATTGTTATTAAGGACATCTTCAGGCGCTACCCTAATACGTATGAGTCGATCATCGCAACACTCTGTGAAAGCCTAGACACCTTAGATGAACCAGAGGCTAAGGCATCAATGATTTGGATTATTGGAGAATATGCTGAAAGGATTGACAATGCTGACGAACTTCTTGAGAGCTTCTTGGAAACATTCCCAGAAGAACCAGCATTAGTTCAATTGCAGTTACTAACGGCAACTGGTAAGTTGTTCCTTGAAAAGCCAACTGAGGGGCCTCAACAGATGATACAGGCTGTTCTCAATAATGCAACAGTTGAAACAGACAATCCTGATTTGCGCGACCGAGCTTATATATACTGGCGACTTCTTTCTACTGATCCTGAGGCAGCTAAAGATGTAGTTTTGGCAGAGAAACCTGTGATCAGCGATGATTCCAACCAGCTTGATTCTTCTCTCCTAGATGATCTGCTAGCCAATATTTCTACCCTTTCATCAGTTTATCACAAGCCTCCAGAAGCATTTGTTAGCCGCGTTAAAACAGCTCCTAGGGCTGATGATGAGGAGTTTGCTGATACAGCTGAAACAGGATATTCGGAGTCACCATCTCAGGGTGTTGATGGGGCATCACCTTCCTCTAGTGCTGGCACTTCTTCTAATGTTCCAGTGAAGCAGCCAGCAGCACCAGCTGCTCCTGCTCCAATGCCAGACCTCCTTGGTGATTTGATGGGTATGGATAACTCCATTGTTCCTGTTGATGAACCAACAGCACCTTCAGGCCCTCCACTACCTGTTTTGTTGCCATCAACCACTGGCCAAGGACTGCAGATCAGCGCACAACTAGTGCGGCGTGATGGCCAAATATTCTATGATATATCTTTTGATAATGGCACTCAAACTGTGCTAGATGGATTCATGATTCAGTTTAACAAAAATACCTTTGGCCTTGCAGCCGGTGGTGCACTTCAGGTCTCTCCACTGCAACCTGGGACCTCGGCCAGGACGCTGCTACCTATGGTGGCATTCCAGAATCTCTCTCCTGGAGCGCCAAGCTCACTGCTGCAGGTTGCGGTGAAGAATAATCAGCAGCCTGTGTGGTACTTCAATGACAAAATCCCTATGCATGCCTTCTTTGGTGAAGATGGCAAAATGGAACGAACAAGTTTTCTTGAGGCCTGGAAATCTTTACCTGATGACAACGAATTTTCGAAAGAGTTCCCCTCTTCTGTCGTCAGCAGCATAGATGCGACCGTTGAGCACCTTGCAGCATCAAATGTGTTCTTTATCGCCAAGAGGAAAAACTCAAACAAGGATGTTCTGTACATGTCTGCAAAGATTCCGCGTGGAATCCCCTTCCTGATAGAGCTTACTGCTGCAGTCGGTGTTCCTGGCGTGAAGTGTGCGGTCAAAACTCCAAACAAGGAGATGGTGGCTCTCTTCTTCGAAGCCATGGAGTCTCTTCTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLISDNNPMVVANAVAALAEIQDSSTRPIFEITSHTLSKLLTALNECTEWGQVFILDSLSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKIILLQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLETFPEEPALVQLQLLTATGKLFLEKPTEGPQQMIQAVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDSSLLDDLLANISTLSSVYHKPPEAFVSRVKTAPRADDEEFADTAETGYSESPSQGVDGASPSSSAGTSSNVPVKQPAAPAAPAPMPDLLGDLMGMDNSIVPVDEPTAPSGPPLPVLLPSTTGQGLQISAQLVRRDGQIFYDISFDNGTQTVLDGFMIQFNKNTFGLAAGGALQVSPLQPGTSARTLLPMVAFQNLSPGAPSSLLQVAVKNNQQPVWYFNDKIPMHAFFGEDGKMERTSFLEAWKSLPDDNEFSKEFPSSVVSSIDATVEHLAASNVFFIAKRKNSNKDVLYMSAKIPRGIPFLIELTAAVGVPGVKCAVKTPNKEMVALFFEAMESLLK</aaseq>

Gene Sequence

<dnaseqindica>1..87#1220..1417#1542..1655#1745..1995#2083..2218#2612..2791#2876..2968#3240..3451#3576..3639#3711..3890#4188..4280#4370..4761#4879..5068#5153..5356#5490..5786#ATGAGCGGGCACGACTCCAAGTACTTCTCCACCACCAAGAAGGGGGAGATCCCCGAGCTCAAGGAGGAGCTCAACTCCCAGTACAAGGTCAACCAACGCACCCCCTCCCCCGTCTCTCCGGTCTCCGTAGCTTGCTTTCCCCGTGCCTGTGGGGGGTCGGTTCGTTCCGGATCCAGATCTGGGCTGGGCGCGGCGATCGCTCGTAGATCTGCGGGTTTTCTGTTGGTTTTGTCGCGGGGTTCGGAGGGCTCAGATTTCGGTGGCGTGGCCTGGCCGAAGAATGAATTGTGGTTTGCAAGTTATGCCGCTGGATTGGGCTGCCTGTCGTTGCTTGCAGCGGCAGATGAAACCGTGAATGGACTGAATTCCCTGATCCATTTCGTAGCTTCTACTGGAAGGAGTTGATCTGAATGGCTTTGATTGTTTAATGCGTAGTCAGATGAACAAGCTGGACCTTCATAAGACAGAAGGATTGCCCCAATGCGCATATGTTTACCTCATACGTCACTAGGGAATATAATTACATGCTTTTAGTTGCCAATACTTATATTAACACTGAAAACAAGAATGTTGTGGAACTTACACATCTTGCTGTCGAAACATTTGCATGGGCTTTATCCTTCATTCATATTCTGTGTGTGAATGATTGTGCACAGAACAGTATTAACATTGAAATGCACATTTCGCATGTATGTTTGAAATGCATATTGTTTGCTAAAAAATGAAAGATGAAACGTATCCACTAGATCACTGCTACAAACCAGGGAGATAAATAAACATATTGCTATTTGGGATAAATCATTTCTGCATGATTGTGCTAATTACAAAAGCACACACTTATGCTTCATTATGATATTAGTCGAGAGAGGAAGTGTGGTATGTAGTCAGTAGTGGATTGAGATCCTCTGCAGTCACTGCACTGTGCCTTTGTCACTGACATGTGGGCCCATTGATCTCCAGGCCTACATGTCAGTGACAAAGGCACGATGCAGTCGACTGTAGAGGATCCTGATCCGTCTGTAGCAGGACAAATCGGATCATGTGTTCAGTAATTCAGTACATTTACAGTGATACCAAAAAAATATTGTACTTGCATACAGGAACAAAATTATGGTTCTAAAGTTTTCACACCAAGTTCTTGTTTATTTTGACATTCAGCAAGTAAGTTGCCTTTTGCAATTTCCGATATCTGATTTATTGTTGGAAATATGTTCTGCAGGATAAGAGAAAAGATGCTGTCAAGAAAGTTATCGCTGCTATGACTGTTGGAAAAGATGTTTCATCTTTGTTTACCGACGTTGTGAACTGCATGCAGACTGAGAACTTGGAGCTGAAGAAACTAGTATATTTATATCTGATTAACTATGCCAAAAGTCAACCTGACCTTGCCATACTTGCTGTAAACACATTTGTTAAGGTAATAAACTATAGCCATACTTGCAACAAACTGTTATGCGGAAAAAAAATGCTGATATGGTACGTTAAAACATGACCTTTTCATAGAAACTAATAAGATGATTCATGAAATGAAACTTTTGCAGGATTCACAAGATCCAAATCCACTGATTCGTGCTTTAGCTGTGAGGACAATGGGTTGCATCCGTGTGGACAAAATCACAGAGTATCTCTGTGATCCTCTTCAAAGATGCCTCAAGGTTTTTTTTCTTTTTGTTGTTTCTAGAACTTTTCAGTCAAGTTGACCTCTTCTATCTAAGTCTATATTTGGCTCTTGAATTGCACACAGGATGATGATCCGTATGTACGGAAGACTGCAGCTATTTGTGTTGCTAAGCTTTATGATATAAATGCTGAGCTAGTTGAGGACAGAGGATTCCTAGAGGCCCTTAAAGACTTAATATCTGACAATAATCCTATGGTAGTTGCCAATGCTGTTGCTGCGCTTGCAGAGATTCAGGACAGCAGTACTCGTCCAATCTTTGAAATCACCAGTCATACGCTGTCAAAGCTTCTGACTGCTCTGAATGAATGCACAGAGTACGATGCAACTTTTGATGTATTGAGTTTTGAACCTATCTGGATATTAAAAATTCAGTCCACTTAACATATTTGGTGTATTTGCAGATGGGGCCAGGTTTTTATTTTGGATTCTCTGTCAAGGTACAAAGCAGCAGATGCCAGGGAAGCAGAAAATATAGTGGAACGGGTTACACCCCGTCTGCAACATGCAAATTGTGCTGTTGTTCTCTCTGCTGTAAAGGTAAATTATTACCTGATTCGCTTGCATTAGAAAAGACAGTTGTTTTAGACAGGTTTTTGTGCAGTCTGTACAGTTTCTATGTGGTAACCATATATCGTAATATCATCATAGTATTGAGTATTTGAATACGTACCTGTAAGGCTTTTTTAGATTATTATTGGTATTGTGAAGTCCTCAGTACATAGGTAGCAGAATGGATTTATTTTTTTTTCTGAGGAGCAAACAAATTAAGGAATTAATGCATGGCGAAATCATCAGCAGCATTTACTGTTTGTTTTTTATTTAAATGTGTTCTTTTCCATTCACGTGATGCTTTACCTATTGTAGTGTTGTCTATCTCCTTTTACACCAGATGGAAACTTTTGTTGATGCTATACTTTTTCCTGTGTGTAGATAATCCTTTTACAAATGGAGCTCATTACTAGCACAGATGTTGTCCGTAATCTCTGTAAGAAAATGGCACCCCCTCTTGTTACGCTTTTGTCAGCAGAACCTGAGATTCAGTATGTAGCGTTAAGGAACATTAATCTGATTGTTCAGAAAAGGCCTACTATACTTGCACATGAAATTAAGGTGATATATTTTCTTCCTCATCTGAGCCACTCATTTCCAGTAACGCAAATGTGTTACTGACCCAACAGGCTGTTCTTGCAACAGGTCTTCTTTTGCAAGTATAATGACCCAATATATGTTAAGATGGAAAAGCTGGAGATTATGATAAAGCTTGCCTCTGACAGAAACATAGATCAGGTAAAAAATCTGCTGTTTTATATTATTATTGTGTCCAGCGCATGTTAGTTGCAGTGAAAGATTTCCTTAACTAAATGTTTTTCTGCTTTTGTATGGTCTCATGTCTACCAGAAGTGCTTTTGTATTGTTGGAAGAAAGGCTAAACAATTATTATATCAGTTTCAAAAATTGGATTAACTTGCCAACCATGTTGAATGTCTTACTCCTTGTGGAGCAGATGGTTTCTTTTCTGTAAATTTTGTTCAAGAAGCTAACAGAGCTCCTTCTATAGGTTCTATTGGAATTCAAAGAGTATGCCACAGAGGTGGATGTTGACTTTGTCCGCAAAGCTGTTCGTGCTATTGGAAGATGTGCAATTAAGTTGGAGAGAGCTGCTGAAAGGTGTATCAGTGTTTTGCTTGAGCTGATTAAGATAAAGGTTAATTATGTTGTGCAGGAGGCTATAATTGTTATTAAGGACATCTTCAGGCGCTACCCTAATACGTGAGTACTGTGGCATGACAGATCAATGTTCTATATTATGTAACAAAGGAACTCTTCAATTTTTTTATTGTTTTTGCTCAAGAATTGCATCTATAAAACTAACTGTTTTCTTGCCAAAATGCAGGTATGAGTCGATCATCGCAACACTCTGTGAAAGCCTAGACACCTTAGATGAACCAGAGGCTAAGGTATTATTCTATGAAAACTGTCTAGGTAATCTATTGCATTTTTGTGCAATTACATGTTTATTTTTCTCCAGGCATCAATGATTTGGATTATTGGAGAATATGCTGAAAGGATTGACAATGCTGACGAACTTCTTGAGAGCTTCTTGGAAACATTCCCAGAAGAACCAGCATTAGTTCAATTGCAGTTACTAACGGCAACTGGTAAGTTGTTCCTTGAAAAGCCAACTGAGGGGCCTCAACAGATGATACAGGTTGCAATTCTCATCTGGTTATTTGTATGTTTGTGCACGTGGTAATGCTTAGAGGTTGCCGAGCGCGGAATGATTTTTGTCTTGGTGTGGATTTGCCTAAAAAATAGTGGTTAGACTCACGGTTGTGTGTTGATGAAAGGAAATAATTTAGACACATGTTTTGAACTGATTGATCAATTTATGCAATGAACAGTTTCTTCTTCCAATAAGCATGATTAGCCTGCCATTAGTTCTTTATTTGTTTATTGTAACAAAGAATCTGTTCACTGTCTAATTTGCAATAACTTTATCATGTAGGCTGTTCTCAATAATGCAACAGTTGAAACAGACAATCCTGATTTGCGCGACCGAGCTTATATATACTGGCGACTTCTTTCTACTGATCCTGAGGTATCATATCATAACCCCTCACCCTTACCCTTATTCAATGCTTGGTTAAATAGCACTCTTACCATTTATATATGTTTGGCGTCCTGCAGGCAGCTAAAGATGTAGTTTTGGCAGAGAAACCTGTGATCAGCGATGATTCCAACCAGCTTGATTCTTCTCTCCTAGATGATCTGCTAGCCAATATTTCTACCCTTTCATCAGTTTATCACAAGCCTCCAGAAGCATTTGTTAGCCGCGTTAAAACAGCTCCTAGGGCTGATGATGAGGAGTTTGCTGATACAGCTGAAACAGGATATTCGGAGTCACCATCTCAGGGTGTTGATGGGGCATCACCTTCCTCTAGTGCTGGCACTTCTTCTAATGTTCCAGTGAAGCAGCCAGCAGCACCAGCTGCTCCTGCTCCAATGCCAGACCTCCTTGGTGATTTGATGGGTATGGATAACTCCATTGTTCCTGTTGATGAACCAACAGCACCTTCAGGGTTAGTATATTTTTGTGGTTTTTGCTAAGGTGTCTCGTGGCATATTCATTTAATCATTTTGTATGACTAGGACAGGTTTTTGATCATATCATCTTTTCTTGTTCTTCCCTTTTGCAGCCCTCCACTACCTGTTTTGTTGCCATCAACCACTGGCCAAGGACTGCAGATCAGCGCACAACTAGTGCGGCGTGATGGCCAAATATTCTATGATATATCTTTTGATAATGGCACTCAAACTGTGCTAGATGGATTCATGATTCAGTTTAACAAAAATACCTTTGGCCTTGCAGCCGGTGGTGCACTTCAGGTACCAGCTATATATTATAAGTATAAAACATTCTTTTTGAAATTCAATTACATGTACTGAACGTGGTGTTATTCTATGAATAAGGTCTCTCCACTGCAACCTGGGACCTCGGCCAGGACGCTGCTACCTATGGTGGCATTCCAGAATCTCTCTCCTGGAGCGCCAAGCTCACTGCTGCAGGTTGCGGTGAAGAATAATCAGCAGCCTGTGTGGTACTTCAATGACAAAATCCCTATGCATGCCTTCTTTGGTGAAGATGGCAAAATGGAACGAACAAGTTTTCTTGAGGTAAAAACGCTAACATGTATTATATTGCATTATTCACAACAGTAGTCAATTTAATTAACTCAATGAATTTCTGTTTCTTGGATTGCCCCGGATTGTTTAGAGTTTCTGAACAAATCTCATGATTCTCTTGCAGGCCTGGAAATCTTTACCTGATGACAACGAATTTTCGAAAGAGTTCCCCTCTTCTGTCGTCAGCAGCATAGATGCGACCGTTGAGCACCTTGCAGCATCAAATGTGTTCTTTATCGCCAAGAGGAAAAACTCAAACAAGGATGTTCTGTACATGTCTGCAAAGATTCCGCGTGGAATCCCCTTCCTGATAGAGCTTACTGCTGCAGTCGGTGTTCCTGGCGTGAAGTGTGCGGTCAAAACTCCAAACAAGGAGATGGTGGCTCTCTTCTTCGAAGCCATGGAGTCTCTTCTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010723