BGIOSGA010744

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Revision as of 09:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010744| Description = Japonica Group Os03g0347500 (Os03g0347500) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA010744, complete gene....")
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Gene Name

BGIOSGA010744

Description

Japonica Group Os03g0347500 (Os03g0347500) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA010744, complete gene.

LocusTag

NM_001056634.1

Ensembl Transcript ID

BGIOSGA010744-TA

Ensembl Protein ID

BGIOSGA010744-PA

Length

2853

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14578776..14581628

Sequence Coding Region

14581592..14581628,14581366..14581402,14580846..14581218,14580394..14580513,14578776..14579111

Genome Context

<gbrowseImage1> name=IndicaChromosome03:14578776..14581628 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:14578776..14581628 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCAGGCATTGGTCTTTGCTGTGGGGATCGTAGGCAACATATTGTCGTTCTTGGTCATCCTTGCACCAGTGCCGACGTTTTATCGGGTGTACAAGAAGAAGTCGACGGAGTCGTTCCAGTCGGTGCCGTACGCGGTGGCGCTGCTGAGCGCAATGCTGTGGCTCTACTACGCCCTCCTCACCTCCGACCTCCTCCTCCTCTCCATCAACTCCATCGGCTGCCTCGTCGAGTCCCTCTACCTCACCGTCTACCTCCTCTACGCCCCCAGGCAGGCCATGGCCTTCACCCTCAAGCTCGTCTGCGCCATGAACCTCGCCCTCTTCGCCGCCGTCGTCGCCGCCCTCCAGCTCCTCGTCAAGGCCACCGACCGCCGCGTCACGCTCGCCGGCGGCATCGGCGCCTCCTTCGCCCTCGCCGTCTTCGTCGCCCCGCTCACCATCATCAGGCAAGTGATCAGGACCAAGAGCGTGGAGTTCATGCCCTTCTGGCTCTCCTTCTTCCTCACCCTCAGCGCCGTCGTCTGGTTCTTCTACGGCCTCCTCATGAAAGACTTCTTCGTTGCCACGCCGAACGTGCTGGGATTGCTGTTTGGGCTGGCCCAGATGGTGCTGTACGTGGTGTACAAGGACCCCAAGAAGAACTCCGCCGTGTCGGAGGCGGCCGCCGCCCAGCAGGTTGAGGTCAAGGACCAGCAGCAGCTGCAGATGCAGCTCCAGGCGTCGCCGGCGGTGGCGCCGCTCGACGTCGACGCCGACGCCGACGCCGACTTGGAGGCGGCGGCGCCGGCCACCCCGCAGCGGCCAGCTGACGATGACGCCATCGACCACAGGAGCGTCGTCGTCGACATCCCGCCGCCGCCGCAGCCGCCGCCGGCGCTGCCGGCCGTGGAGGTGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MVQALVFAVGIVGNILSFLVILAPVPTFYRVYKKKSTESFQSVPYAVALLSAMLWLYYALLTSDLLLLSINSIGCLVESLYLTVYLLYAPRQAMAFTLKLVCAMNLALFAAVVAALQLLVKATDRRVTLAGGIGASFALAVFVAPLTIIRQVIRTKSVEFMPFWLSFFLTLSAVVWFFYGLLMKDFFVATPNVLGLLFGLAQMVLYVVYKDPKKNSAVSEAAAAQQVEVKDQQQLQMQLQASPAVAPLDVDADADADLEAAAPATPQRPADDDAIDHRSVVVDIPPPPQPPPALPAVEVA</aaseq>

Gene Sequence

<dnaseqindica>1..37#227..263#411..783#1116..1235#2518..2853#ATGGTTCAGGCATTGGTCTTTGCTGTGGGGATCGTAGGTAACACACATGCACACACTAGCTAATTCGAGATTACACACTTCTATAACAACTAACCACATCTAGCATGCAGTAGTATTAGTGGTTTCCACAACAAGTATAGTATGCATCCATGCATGCATGCATTATACTTCAATTTGCCACTCGAACTAACTAATTTTCCTTATTGCTGGTAAATGATTTTTGCAGGCAACATATTGTCGTTCTTGGTCATCCTTGCACCAGTGTAAGTACCTACTAGCTTCATGAGCATTGAGCTAATTAAGTCCATGATCTGTTAATAATTTGCATGCATCTTGAAAAAAAAAGAGAGAGAACATGTTAAGCTAATTAATGGATATATATGATGTGAATGCAATGCAAATTAATGCAGGCCGACGTTTTATCGGGTGTACAAGAAGAAGTCGACGGAGTCGTTCCAGTCGGTGCCGTACGCGGTGGCGCTGCTGAGCGCAATGCTGTGGCTCTACTACGCCCTCCTCACCTCCGACCTCCTCCTCCTCTCCATCAACTCCATCGGCTGCCTCGTCGAGTCCCTCTACCTCACCGTCTACCTCCTCTACGCCCCCAGGCAGGCCATGGCCTTCACCCTCAAGCTCGTCTGCGCCATGAACCTCGCCCTCTTCGCCGCCGTCGTCGCCGCCCTCCAGCTCCTCGTCAAGGCCACCGACCGCCGCGTCACGCTCGCCGGCGGCATCGGCGCCTCCTTCGCCCTCGCCGTCTTCGTCGCCCCGCTCACCATCATCGTAAGCGCATTAATTCATTCCTCACATAGTCACATACATAATACCTCCGTTTGTTAATAGAGGCTACCATTAACTTTTAAACATAAAATATATAAGATATAAATCATGCTTTAAATATTTTTAAGTTATAAAACAACTCATAATAAAATAGATGATAATTATATAATTTTTAATTACACAAATGATCAAATATGTATACGATATTATCTATTAAAAAATACCATAGCTTCATCTAACTATATATCTGTTTCATTAATTTGATTATAAGATAATTAATTAATTAGCATATTAACAAGAACTAACATCAAGTTTGATTAAATTTGGTTTTGCAGAGGCAAGTGATCAGGACCAAGAGCGTGGAGTTCATGCCCTTCTGGCTCTCCTTCTTCCTCACCCTCAGCGCCGTCGTCTGGTTCTTCTACGGCCTCCTCATGAAAGACTTCTTCGTTGCCGTACGTCCTATTATTTTCTCTTTTTTACTTGTTTTTGTCCCGTTCTTTCTCAACATCTCTAGCTAGTAGCAAGCAAGGAGTCCATCCAGCCATGCAAGCTACTCCCTCCGTTTCACAATGTAAATCATTTTAAGATTTTCCGTATTTATATTGATGTTAATGAATCTAGGTAGATATATATGTCTAAATTTATTAACATCAATATAAATGTGGAGAATGTTAGAATGACTTACATTATAAAACGGAGGAAGTAGCTAGCTAGCCAGCTTAAGGGCACCCACAATGGCTATCTATAGGCTCTCTACAAGAGATCCATGTCAGCATATTTTACTACTTGGAAGAGATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACCTGGAGATAGTCTATAGAGAAAAACGAGGCAATGGATTAGACAGCTATAGATACCCATGTAGACATACCATTGAAGTAGTTTACTATTAATCTAGTCTATTGCTGAGATGTACATGTTTTATAGATAGCACCTTACTTTACCATTGCGGGTGCTCTAAGCAACTGTTAATTGTTGTGCTTTTATTAGGTAGTAATAATTAATTAATCATGCATGGATAGTGATGTGAGCTAGTGCGTGTCGCTTGTGTCACCGCCCATGAGCCAGATGTTTTCTGCCGAGAGGCGAGAGCACAGCACAAAAGATCACCGCCACTATTCATCACTTGTATAACCTATCTTTCGCCAAAGCAGAGCTTACGTACTCTCGCAAGCCTAAAAAGCCCTGATTAAACTACGTAAACGTACTCATCACACACGATTATATTTAACCAGGAGATTTTTGTTGTAGCCAGCTGCATGCATCCCCGCATATATTCCAGTAGTAATTAATTAGAACAATAAATTAAGCTATATATATTGATTAAATTACGGATTTGCTAGAAAATTTTCACAAGTTTTTTTCCCTAGCTCAAAACTTTTCTCGAGGCTTGTGCATGAAGAAAAAAATTAATAAAAATAAAATTTCACACATGTTACGTGTAAAATTTCAATACTAGTTGAATGCAAGTTTTATAGTGTTGTAAGTTATATCGTAGTTACCATGTACTCCCTCCGTTTCATAATGTAAGTCATTCTAACATTTTCCACATTCATATTAATGCTAATGAATATGGTAAATACTAGAATGACTTACATTGTGAAACGGACGGAGGAAGTAATTACATTTTAATTATATTATAACAACTTTTTAGCGGTAGTGTTTTAGATACTCCCTTAAATTATTAATATCGCATTTATATGCAGACGCCGAACGTGCTGGGATTGCTGTTTGGGCTGGCCCAGATGGTGCTGTACGTGGTGTACAAGGACCCCAAGAAGAACTCCGCCGTGTCGGAGGCGGCCGCCGCCCAGCAGGTTGAGGTCAAGGACCAGCAGCAGCTGCAGATGCAGCTCCAGGCGTCGCCGGCGGTGGCGCCGCTCGACGTCGACGCCGACGCCGACGCCGACTTGGAGGCGGCGGCGCCGGCCACCCCGCAGCGGCCAGCTGACGATGACGCCATCGACCACAGGAGCGTCGTCGTCGACATCCCGCCGCCGCCGCAGCCGCCGCCGGCGCTGCCGGCCGTGGAGGTGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010744