Os12g0271600

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0271600| Description = Similar to Myosin heavy chain-like| Version = NM_001073083.1 GI:115488127 GeneID:4351956| Length = 7411 bp| Definit...")
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Gene Name

Os12g0271600

Description

Similar to Myosin heavy chain-like

Version

NM_001073083.1 GI:115488127 GeneID:4351956

Length

7411 bp

Definition

Oryza sativa Japonica Group Os12g0271600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9906543..9913953

Sequence Coding Region

9908043..9908213,9912007..9913779

Expression

GEO Profiles:Os12g0271600

Genome Context

<gbrowseImage1> name=NC_008405:9906543..9913953 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:9906543..9913953 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctacaaaactccgtcaaccgtcaactgatgcagaaaaaacagaggttggagaaatagacacaagggctccttttgaatccgtcaaagctgcagtaagcttatttggggaagttcgattttcatctgacaaatcagctgcaaggaagccaaagcctcctcaggcagagagggtgttagctaaggagacagaactgcacttggcccagaaagagttaaataaatacaaggatcagctcaacaatgctgagacaaccagagtgcaagcgttatctgagctggagaaagctaagaaaactgttgaggacctgaccaataagctggatgctatcaacaagtccaaagagctggctattcaagcaacagaggatgcaaaaactcgaacaaagcagcttgaaggtggagactcgcttgaggctgttggaaaagatggccctttaaagcaggaattggatgttgcaagggaacagtatgttgttgctttggcagatcttgatgcagcaaaacaggagcttagaaagctcaagaaggattttgaagcttcattggatatgaggttggctgcagcacagcaggaagaggaatcattgcacttagctgaaacaaacaagcaaaaggctgatcagcttcgcaaggagattgctacaattcaagagtctcttacgcatgtgaaggcagccactgaacaagcacatgaagaagaggctcaaatccttgctgagaaagatgttactaggaaaacatacaaacaagctttggaagaagccgagaagaaattatcctctttgaaaaaggattttgatcctgctgtttataaaagcctcaaagaaaagctagatgagaccaatttggagatttcatctatgcagaaaaagattgaagatgctcgagctcaagatttggagtctattgctactgtcagcacagagttggatgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttagtagaatcacttaaacaagagttagaagctgttaaggaggagcatgatcaattgaaacagaaggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaatctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttgatgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaatgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcagaagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaagcaaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctgctcgggcctcaacatctgaatcaggtgcgaagataacaatatcaaaagaagagtttgaatctcttagccgaaaggtggaggagtcagagaaattgagtgagatgaaagttgctgccgctatggctcaagtggaggctgtcagagccagtgagaatgaggcgattaagaaattggaggcggctcggaaagagatggaagacatggaattggcaacagaggaagcactaaagagggcagagatggctgaagcagcaaagagagctgtagaaggtgagctcaggaggtggcgcgagaaggagcagaagaaagctgctgaagctcagcctgctccagaagcgcaagcacatggaactgcatcttcccctgtacagaaagcttctgctggaaaagccaatgagaagaatgatggacctcacaagaacagcagaacactattgaaaaagagctttatgctaccaaatattacaagcatgttccataagaagaagaatcatgccgacggcagttctccttcacatcttcctggggacaaatctgtataa</cdnaseq>

Protein Sequence

<aaseq>MATKLRQPSTDAEKTEVGEIDTRAPFESVKAAVSLFGEVRFSSD KSAARKPKPPQAERVLAKETELHLAQKELNKYKDQLNNAETTRVQALSELEKAKKTVE DLTNKLDAINKSKELAIQATEDAKTRTKQLEGGDSLEAVGKDGPLKQELDVAREQYVV ALADLDAAKQELRKLKKDFEASLDMRLAAAQQEEESLHLAETNKQKADQLRKEIATIQ ESLTHVKAATEQAHEEEAQILAEKDVTRKTYKQALEEAEKKLSSLKKDFDPAVYKSLK EKLDETNLEISSMQKKIEDARAQDLESIATVSTELDDAKEMLQKVAEEESSLRSLVES LKQELEAVKEEHDQLKQKDTETESIVGDLHVKLQKCKSELEAAVAAESKATSASDDLM LALQQLSSESKNALQEAEVMQKSAADLRDEAEAARVALAEAEQKLQSALKEAEEAKSA EAKALDQIKQLSERASAARASTSESGAKITISKEEFESLSRKVEESEKLSEMKVAAAM AQVEAVRASENEAIKKLEAARKEMEDMELATEEALKRAEMAEAAKRAVEGELRRWREK EQKKAAEAQPAPEAQAHGTASSPVQKASAGKANEKNDGPHKNSRTLLKKSFMLPNITS MFHKKKNHADGSSPSHLPGDKSV</aaseq>

Gene Sequence

<dnaseqindica>1501..1671#5465..7237#cctttccgaccgatccaccgatcggaaaccacgccctaaccccagcaaaccccaacgcccccctccgccctgccaccctccgccgccgccgccttcgccggcgaccaccccgccgccctccccggggggacccatctcctccgccgtcccctcgccgcctgcaccccggcggtgcctcggcgtcctgctctgccgcctcctcgccggtgagcgccatcctcctccttcctcatccctctcgcgcgttgcgttaagcctcgtcttctctgggtagatctggaagcttttctcttagtttggcttagccttctctggtaataatggcgatttgtttgttttttcccccaaaaataaggggttccatgcccccacacccgcgttaggtgcgccgctcgattaaatgctgtaatttctgcatcctttcttggttggaatgggtgccctaggaagggtaaattttggtcatgccaaatttgatgattctacaccgagagatgcggaatgcgcatgtggattgcacctgtatggctgtatgcgattgaaatgagaggaattgtgcagctctcaaaatgctataggctagaaaaatcataccataccatgcatacatttgttttaagactacgtgattagcgtggaattgagggtggcggatgtacttgcttactctgggtgaaattggtgttgctcaatcgaaattccacatgttggcattatgatatgcatgctacattgttatttacaatgtaagatggagacatggtcgttattgatacatcgggtttgttttgagatcctgggcaccataaaagcttttgctagccaatccatttagcaccagatgacccatgctctttacttacaaaattactatcactgtgggagtcaccgggtaagcatgacctatggccatgggtttggggaagggaaaaaaattgttttgaaatatatttgatgatgggccttacctgtattttgtcaatctcaaactagaaactaacatcttattagcctgtagcattatcttaaagtaatcccctgtagaattctataaaatataacctagtgtgacgctagacatagggcctgttcactttgatgccactttcaaccttaccaaattttggtaaagttgccaaaaaagtggctacatttagtttgctgtcaaattttggtaactatataagaaatcctaccaaaattttggcatagttgccaaaattttggcaatgcccaaatttggtaaggttttttttggcatcaaagtgaacaggcccataatcaatatacgttttcttagaatgctcgtaaactatatgggagaaacagactggtttcaaggcctattagcacatgttatgcagtttctttcgtaaaactggccatatttataattcatttactgaacatattactacaatcattttctgtaataattgttttgtaactccattaaatcttctgtggcagtgtgcataatacatattcggaaaggcaaatatggctacaaaactccgtcaaccgtcaactgatgcagaaaaaacagaggttggagaaatagacacaagggctccttttgaatccgtcaaagctgcagtaagcttatttggggaagttcgattttcatctgacaaatcagctgcaaggaagccaaagcctcctcaggcagaggtaggtacttatattaaacatttttttcatattagattaataatagtacttcaatgtgtgcatgcatatatctttatgaaggttgaacataccgatttgtgtggaatgttatgcgtgcctactattacatggaatacttataagtacagcaatgttgcagaccttgatgttcttaagccttgttgattccagaactgctaacttcaaatcttacgcaacaaaatgctgtgaccttcaagtgtgttatactgatgccaatatgccataatgttgataaccattttcaaatgtctaagtagtttcatgtagcacttatttgaagctaagtaacacagatcttggaacgatgctgtgttcctcgtccagtgaactttgtcccgaaacaaggaacgggaacaacacaagatgacgtaccgaacgtggatggatcacatcctaacataaggaggtatgaggaaggcaaatctgagaggggttgggtttagggatggggaatgcaccagggtcacagccgcaacgggcgagcactgttattgctccctcgctgcttgctgccatcgcacctgagtgcatggaggaacgccaccgctgttgcgctgaggaggacgggggagtgctgctgctgttgtgccgaagggggttgggggagcgttgtcgccactgacctgagggaggacaggaagcaccgctgtagtcgtgctgcggggcttggggaagtgcggttgccgctgtcgcgccgaggggcatgggggagtgccatctccatcgtcgctatcacgctgagtggctgagaacgatgggatggattctttccatcgatgggataagactgtgagtggataagggattcatcttatttcatttttgctcttggactctgaatattatgaacagttctttattgaattgatttctttcatataagccataaaatttcatatatattcatttaagcttattgtatgcataacaatggaatgctcatatttataagcccttggcttctaatttctgatattgttccggactatcatcccggaaactaatggaacgcattccatactttgaacaaacgttttgaagaggtatttcccccttcataccatatttttcaaaatccctgttccgggatctttttatgacttaggtttgaagccacgcctttgttttttttaatgaaatttgtcatatcagcaaactatttcctgcatgttccagtgaataccacaagatacttgttttttatatgctctaactcttttcatttgcatttactttcctgttcattcctatttcttttttgcaagaaataggtgtgttcccactgttagaaatttcaggctgttccccagcctatttgctgtctttaattaaacagattattattaaattaatgcacattctccatttatgagtcttttcacagcagaaatttgatttgcatttctgaaagaatagtagttttgccttctacttttactttgattatttgtcttggtagttgttgtacctggtccacatctgatgaactacactttagaagagagcataattgagtgacttgttggcagaaacagagaaagaattagcgatgattcaccatatgatactactagaagtctaagtttttgtttgtattttttttttggggggggggggggtgtggggactgacatgcattcataccattaaaaaagttcagtcctgtaagctcaagttttgctggatttaattttcaccttcgttttcgactccaaatagtgccactcctggagattggttgtcccatgcttccttccatgtgcctatttgaatattgcatcatagttgccatggccataatcacataaacgcaatgcagaaacattagttccagcttaagacaggagtatcaaatttgttatatggtataagctttgaacgtaaacccagatacaaatctttcactcactgaaaagttaaaacatcaggtactgggttttttctggattggaattgtatcaagataggactaatttgatcaaagtatcaccccagtctcactcctacaagtagtgatgtccttgagccaacttaggggcctgcgaggcaccatgatactgggatctgacgtgcaatcctttgctcatacccattcattgtctgttgccttggtccactggtcttcatcttctctgagcctggcatggttgccagtatctccaagacctactgttgccatggaaataggggcagcggtgagctggttagaccgttagagcaacagtttggtagaggaaggtggcagctgctggtacttgggactgttaattggatggaaaggtggcagtggcatgatggtggaaagcactgttgcctatgacacttggtgtttacgcagcaggcaagcgagccaatgtgtcctagatggtgcataggcaagcacatttttagggattgcggcaagcaacaatagcatgttatagcatatcagcttcacatgtggacccagtcagtgttgagtgttgggtggacaccaaaatctgatgtcatccaaacaagccttagtgttttacttactaagagtatgttttatttgatgatatatataatttttttatcaacaattacatgcatatcaggcgaatccctgaatcatctttttttagctcaactcagacactcaaatctgagttggactctgacatcagtgtcccagtaagactggacccagttagcaatcttaggctcttagtaagtaataatggtggtagcggcaagtaggcagttagccatgcagcaacagccaagaccacccaagcagcagaaaagagaaaacaaagaaggctaggagtgggctgcctggaagagatggtttggagcttgcaagcggtggctctgtttcaggtgttttaatgacattagtggtgacatcactagtttcagtatggcagtcgaattagcactgaatcatgtcttagtgaactatacacacatcttttgtgacttacatgattggctgatttgtaggtcacttcagcatagctaagcttactaggacaccatgtaactgaaaacaagccaaaaaactatagcggttttgggcgagtgggtgattcttctgcttttatggttgaaaggtgcctaatggtttgtttgtgattgggatttcatttgtagacctaggcaatagtttttttctttaggtgagagtgagtcccatggtcacgacagggagtccacagaagcacctctcacatatgtgtatctagtacatgtgggaggatgctttgttaagcttaaattttatttgatttgttttggattggcatggtcaacataacaaaagaacagttagagacagtgattgaaaattttttttggatgttgtaaatgtacatgcgcagatagttcacaatgcctaatgttgggatgctgtctaatatagatcaactaaaattgtcaactgcctccatcatccagacatgtagtatctcaggatctttcttagttgtttttactttttccaattttatagttttttaatgcgattgtattatcttttgaggatgcatttttgtgcttatatttaacatgttttttcatgcatttaaatttcttcattttaatcgcatggacctcatatttttacatcatagagtataactgtataagtaataactgaacactcatatggtttaactgagtctataacttcattatccatggaatggcatttcactttatctattttgtatttggttatccaaatatactctgatgcttgcaatatcaaaatcctatcctgtggcagagggtgttagctaaggagacagaactgcacttggcccagaaagagttaaataaatacaaggatcagctcaacaatgctgagacaaccagagtgcaagcgttatctgagctggagaaagctaagaaaactgttgaggacctgaccaataagctggatgctatcaacaagtccaaagagctggctattcaagcaacagaggatgcaaaaactcgaacaaagcagcttgaaggtggagactcgcttgaggctgttggaaaagatggccctttaaagcaggaattggatgttgcaagggaacagtatgttgttgctttggcagatcttgatgcagcaaaacaggagcttagaaagctcaagaaggattttgaagcttcattggatatgaggttggctgcagcacagcaggaagaggaatcattgcacttagctgaaacaaacaagcaaaaggctgatcagcttcgcaaggagattgctacaattcaagagtctcttacgcatgtgaaggcagccactgaacaagcacatgaagaagaggctcaaatccttgctgagaaagatgttactaggaaaacatacaaacaagctttggaagaagccgagaagaaattatcctctttgaaaaaggattttgatcctgctgtttataaaagcctcaaagaaaagctagatgagaccaatttggagatttcatctatgcagaaaaagattgaagatgctcgagctcaagatttggagtctattgctactgtcagcacagagttggatgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttagtagaatcacttaaacaagagttagaagctgttaaggaggagcatgatcaattgaaacagaaggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaatctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttgatgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaatgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcagaagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaagcaaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctgctcgggcctcaacatctgaatcaggtgcgaagataacaatatcaaaagaagagtttgaatctcttagccgaaaggtggaggagtcagagaaattgagtgagatgaaagttgctgccgctatggctcaagtggaggctgtcagagccagtgagaatgaggcgattaagaaattggaggcggctcggaaagagatggaagacatggaattggcaacagaggaagcactaaagagggcagagatggctgaagcagcaaagagagctgtagaaggtgagctcaggaggtggcgcgagaaggagcagaagaaagctgctgaagctcagcctgctccagaagcgcaagcacatggaactgcatcttcccctgtacagaaagcttctgctggaaaagccaatgagaagaatgatggacctcacaagaacagcagaacactattgaaaaagagctttatgctaccaaatattacaagcatgttccataagaagaagaatcatgccgacggcagttctccttcacatcttcctggggacaaatctgtataatctatctgaagctcacgtctgaatgatgtgattccaaacttggaatcatggctttatgtatgatattatatttgtagttgcttgtaatatataatgttatcctggtctatatctatgacttgcctgttcctgactatttgggctcctgtgataagtttttttcttttttgtacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0271600, RefSeq:Os12g0271600