BGIOSGA010822

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Revision as of 09:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010822| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010822, complete gene.| tag = OS03G03...")
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Gene Name

BGIOSGA010822

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010822, complete gene.

LocusTag

OS03G0326000

Ensembl Transcript ID

BGIOSGA010822-TA

Ensembl Protein ID

BGIOSGA010822-PA

Length

4261

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13259079..13263339

Sequence Coding Region

13261983..13263339,13261580..13261886,13260427..13261111,13260215..13260338,13259911..13260130
,13259376..13259834,13259079..13259289

Genome Context

<gbrowseImage1> name=IndicaChromosome03:13259079..13263339 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:13259079..13263339 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGAGGAACACGACCACCATGGGTCGTCGCGGCACATGTCGGCGTCGCAGAAGGAGCTCGGCGACGAGGACGCGCGGGTGGTGCGCGTCGGGGACGCCGAGCGCACCAACGAGCAGCTGGAGTTCGCCGGGAACGCGGTGCGGACGGCCAAGTACTCGCCGCTCACGTTCCTGCCGCGGAACCTGTTCGAGCAGTTCCACCGCCTCGCGTACGTCTACTTCCTCGTCATCGCCGTGCTCAACCAGCTCCCCCAGCTCGCCGTCTTCGGGCGCGGCGCGTCGGTCATGCCGCTCGCGTTCGTCCTCACCGTCACCGCCGTCAAGGACGCGTACGAGGACTGGCGGCGACACCGCTCTGACCGCGCCGAGAACGGCCGCCTCGCCGCCGTCCTCCTATCCCCTGGCGCGGGCACCCACTTCGCCCCGACCAAGTGGAAGCACGTACGCGTCGGCGACGTCGTGCGCGTCTACTCCGACGAGTCCCTCCCGGCTGACATGGTCCTCCTCGCTACCAGCGATCCCACCGGCGTCGCCTACGTGCAGACGCTCAACCTTGATGGCGAGTCCAACCTCAAGACGCGCTACGCAAAGCAAGAAACGCTCACCACGCCGCCGGAGCAGCTCACCGGCGCCGTCATCCGCTGCGAGCGCCCGAACCGCAACATCTACGGGTTCCAGGCCAACCTCGAGCTGGAGGGGGAGAGCCGCCGGATACCGCTCGGCCCGTCCAACATCGTGCTGCGAGGCTGCGAGCTCAAGAACACGACCTGGGCCATCGGCGTGGTGGTGTACGCGGGGCGCGAGACCAAGGCGATGCTGAACAACGCCGGCGCGCCGACCAAGCGCAGCCGCCTCGAGACGCAGATGAACCGGGAGACGCTCTTCCTCTCCGCCATCCTCGTCGTGCTCTGCTCGCTCGTGGCGGCGCTCTCGGGCGTGTGGCTGCGCACCCACAAGGCCGACCTCGAGCTGGCCCAGTTCTTCCACAAGAAGAACTACGTGAGCGACGACAAGAACGCCAACTACAACTACTACGGCATCGCTGCCCAGATCGTGTTCGTGTTCCTCATGGCCGTCATCGTGTTCCAGATCATGATACCCATCTCGCTCTACATCTCCATGGAGCTCGTCAGGCTCGGGCAGGCCTACTTCATGATCCGGGACACGACGCTGTACGACGCGTCCTCCAACTCGAGGTTCCAGTGTAGGGCGCTCAACATCAACGAGGACCTAGGCCAGGTCAAGTGCGTCTTCTCCGATAAGACCGGCACGCTCACTCAGAACAAGATGGAGTTCCGGTGCGCGAGCGTCGGCGGCGTCGATTACAGCGACATCGCACGGCAGCAACCTGTTGAGGGTGATCGGATTTGGGTGCCCAAGATTCCGGTGAACGTCGACGGGGAGATCGTGGAGTTGCTGAGGAATGGGGGAGAGACAGAGCAAGGAAGGTACGCCCGGGAGTTCTTCCTTGCTCTGGTGACGTGCAACACCATTGTTCCCTTGATTCTTGATGGCCCGGACCCGAAGAAGAAGATCGTCGACTACCAGGGCGAGTCCCCCGACGAGCAGGCGTTGGTCTCCGCCGCCGCCGCGTATGGTTTCGTGCTAGTTGAACGAACCTCCGGGCACATTGTCATTGACGTCCTTGGTGAGAAGCAGAGATTTGATGTTCTTGGACTTCATGAGTTTGACAGCGATCGCAAGAGGATGTCTGTTATCATTGGCTGTCCTGACAAAACTGTCAAGCTGTTCGTAAAAGGCGCAGATAATTCGATGTTTGGAGTCATCGACAAAACAATGAATCCCGATGTTGTTCGTGCAACTGAGAAGCATCTCCATGCATATTCCTCACTGGGGCTGCGTACACTTGTTATCGGTGTCAGGGAACTTAGCCAGGAAGAGTTTCAGGAGTGGCAAATGGCTTATGAGAAGGCTAGTACTGCATTGCTAGGAAGAGGAGGCCTACTCCGTGGTGTGGCTGCCAACATCGAACAGAACCTGTGCCTATTGGGAGCCTCTGGTATTGAAGACAAGCTGCAAGATGGTGTACCCGAGGCGATCGAAAAACTCAGGGAAGCTGGGATTAAGGTTTGGGTACTAACTGGTGACAAGCAAGAAACTGCTATCTCCATTGGCTTTTCCTGCAAGCTTTTGACAAGGGAGATGACACAGATTGTAATTAACAGTAACTCAAGAGAGTCATGTAGAAAGAGTCTTGATGATGCAATTTCAATGGTTAACAAACTCCGGTCATTATCAACGGACTCACAAGCTAGAGTCCCTCTCGCTTTGATCATTGATGGTAACAGCCTTGTCTACATTTTTGATACAGAACGGGAAGAGAAGCTTTTTGAAGTGGCAATAGCTTGTGATGTTGTTCTATGTTGCCGGGTAGCTCCCCTACAGAAGGCCGGTATTGTCGATCTAATAAAGAAGCGGACAAGTGACATGACTTTGGCTATTGGAGATGGTGCAAATGATGTATCCATGATTCAAATGGCTGATGTTGGCATTGGCATCAGTGGACAAGAAGGAAGGCAAGCTGTTATGGCATCAGATTTTGCCATGGGACAATTCAGATTTTTGGTTGACCTGTTGTTGGTTCATGGTCATTGGAACTACCAGAGAATGGGCTACATGATCCTATATAACTTCTACAGAAATGCTACTTTCGTATTCGTGCTTTTTTGGTACGTACTTCACACTGGTTTCACCCTGACAACAGCAATAACCGAGTGGAGCAGTGTGTTATATTCTGTGATCTATACTGCTGTCCCAACTATCGTTGTTGCGATTCTCGACAAGGATCTGAGTAGGAGGACATTGTTGAAATACCCCCAACTCTATGGTGCAGGGCAGCGCGAGGAGAGTTACAACCTAAGGCTGTTCATTTTTGTCATGCTGGACTCCATCTGGCAGAGCCTCGCAGTTTTCTTTATCCCTTACCTTGCATACAGAAAGAGTACAATCGACGGTGCGAGTCTGGGAGACCTCTGGACACTAGCTGTTGTCATTCTTGTGAACATTCACCTTGCAATGGATGTCATCAGATGGAACTGGATCACGCACGCAGCAATATGGGGCAGTATAGTCGCAACGCTGATTTGTGTCATGGTCATAGACTCCATACCGATATTGCCTGGTTTCTGGGCAATATACAAGGTGATGGGAACTGGACTGTTTTGGGCATTGCTGCTCGCGGTAATTGTGGTTGGAATGATTCCTCATTTTGTCGCTAAGGCCATAAGGGAGCATTTCCTTCCGAATGATATTCAGATTGCGAGAGAAATGGAGAAATCTCAAGATTCTCATGATGTCACTCATCCAGAAATTCAGATGAGTACAGTGGCACGAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MAEEHDHHGSSRHMSASQKELGDEDARVVRVGDAERTNEQLEFAGNAVRTAKYSPLTFLPRNLFEQFHRLAYVYFLVIAVLNQLPQLAVFGRGASVMPLAFVLTVTAVKDAYEDWRRHRSDRAENGRLAAVLLSPGAGTHFAPTKWKHVRVGDVVRVYSDESLPADMVLLATSDPTGVAYVQTLNLDGESNLKTRYAKQETLTTPPEQLTGAVIRCERPNRNIYGFQANLELEGESRRIPLGPSNIVLRGCELKNTTWAIGVVVYAGRETKAMLNNAGAPTKRSRLETQMNRETLFLSAILVVLCSLVAALSGVWLRTHKADLELAQFFHKKNYVSDDKNANYNYYGIAAQIVFVFLMAVIVFQIMIPISLYISMELVRLGQAYFMIRDTTLYDASSNSRFQCRALNINEDLGQVKCVFSDKTGTLTQNKMEFRCASVGGVDYSDIARQQPVEGDRIWVPKIPVNVDGEIVELLRNGGETEQGRYAREFFLALVTCNTIVPLILDGPDPKKKIVDYQGESPDEQALVSAAAAYGFVLVERTSGHIVIDVLGEKQRFDVLGLHEFDSDRKRMSVIIGCPDKTVKLFVKGADNSMFGVIDKTMNPDVVRATEKHLHAYSSLGLRTLVIGVRELSQEEFQEWQMAYEKASTALLGRGGLLRGVAANIEQNLCLLGASGIEDKLQDGVPEAIEKLREAGIKVWVLTGDKQETAISIGFSCKLLTREMTQIVINSNSRESCRKSLDDAISMVNKLRSLSTDSQARVPLALIIDGNSLVYIFDTEREEKLFEVAIACDVVLCCRVAPLQKAGIVDLIKKRTSDMTLAIGDGANDVSMIQMADVGIGISGQEGRQAVMASDFAMGQFRFLVDLLLVHGHWNYQRMGYMILYNFYRNATFVFVLFWYVLHTGFTLTTAITEWSSVLYSVIYTAVPTIVVAILDKDLSRRTLLKYPQLYGAGQREESYNLRLFIFVMLDSIWQSLAVFFIPYLAYRKSTIDGASLGDLWTLAVVILVNIHLAMDVIRWNWITHAAIWGSIVATLICVMVIDSIPILPGFWAIYKVMGTGLFWALLLAVIVVGMIPHFVAKAIREHFLPNDIQIAREMEKSQDSHDVTHPEIQMSTVARA</aaseq>

Gene Sequence

<dnaseqindica>1..1357#1454..1760#2229..2913#3002..3125#3210..3429#3506..3964#4051..4261#ATGGCCGAGGAACACGACCACCATGGGTCGTCGCGGCACATGTCGGCGTCGCAGAAGGAGCTCGGCGACGAGGACGCGCGGGTGGTGCGCGTCGGGGACGCCGAGCGCACCAACGAGCAGCTGGAGTTCGCCGGGAACGCGGTGCGGACGGCCAAGTACTCGCCGCTCACGTTCCTGCCGCGGAACCTGTTCGAGCAGTTCCACCGCCTCGCGTACGTCTACTTCCTCGTCATCGCCGTGCTCAACCAGCTCCCCCAGCTCGCCGTCTTCGGGCGCGGCGCGTCGGTCATGCCGCTCGCGTTCGTCCTCACCGTCACCGCCGTCAAGGACGCGTACGAGGACTGGCGGCGACACCGCTCTGACCGCGCCGAGAACGGCCGCCTCGCCGCCGTCCTCCTATCCCCTGGCGCGGGCACCCACTTCGCCCCGACCAAGTGGAAGCACGTACGCGTCGGCGACGTCGTGCGCGTCTACTCCGACGAGTCCCTCCCGGCTGACATGGTCCTCCTCGCTACCAGCGATCCCACCGGCGTCGCCTACGTGCAGACGCTCAACCTTGATGGCGAGTCCAACCTCAAGACGCGCTACGCAAAGCAAGAAACGCTCACCACGCCGCCGGAGCAGCTCACCGGCGCCGTCATCCGCTGCGAGCGCCCGAACCGCAACATCTACGGGTTCCAGGCCAACCTCGAGCTGGAGGGGGAGAGCCGCCGGATACCGCTCGGCCCGTCCAACATCGTGCTGCGAGGCTGCGAGCTCAAGAACACGACCTGGGCCATCGGCGTGGTGGTGTACGCGGGGCGCGAGACCAAGGCGATGCTGAACAACGCCGGCGCGCCGACCAAGCGCAGCCGCCTCGAGACGCAGATGAACCGGGAGACGCTCTTCCTCTCCGCCATCCTCGTCGTGCTCTGCTCGCTCGTGGCGGCGCTCTCGGGCGTGTGGCTGCGCACCCACAAGGCCGACCTCGAGCTGGCCCAGTTCTTCCACAAGAAGAACTACGTGAGCGACGACAAGAACGCCAACTACAACTACTACGGCATCGCTGCCCAGATCGTGTTCGTGTTCCTCATGGCCGTCATCGTGTTCCAGATCATGATACCCATCTCGCTCTACATCTCCATGGAGCTCGTCAGGCTCGGGCAGGCCTACTTCATGATCCGGGACACGACGCTGTACGACGCGTCCTCCAACTCGAGGTTCCAGTGTAGGGCGCTCAACATCAACGAGGACCTAGGCCAGGTCAAGTGCGTCTTCTCCGATAAGACCGGCACGCTCACTCAGAACAAGATGGAGTTCCGGTGCGCGAGCGTCGGCGGCGTCGATTACAGCGACATCGCACGGCAGCAACCTGTTGGTAGGAGGACTAGCTCTCTTCTCTCTTATCCTGAATTCTTTCCATTCGGGGCGGGAAGCCATGGATGGGGAGCTGATGGCTTCTGATACATGGCAGAGGGTGATCGGATTTGGGTGCCCAAGATTCCGGTGAACGTCGACGGGGAGATCGTGGAGTTGCTGAGGAATGGGGGAGAGACAGAGCAAGGAAGGTACGCCCGGGAGTTCTTCCTTGCTCTGGTGACGTGCAACACCATTGTTCCCTTGATTCTTGATGGCCCGGACCCGAAGAAGAAGATCGTCGACTACCAGGGCGAGTCCCCCGACGAGCAGGCGTTGGTCTCCGCCGCCGCCGCGTATGGTTTCGTGCTAGTTGAACGAACCTCCGGGCACATTGTCATTGACGTCCTTGGTGAGAAGCAGAGGTACAGATCGAGACCACGCCCTTGTTGCGATTAAAAATTTTGGCGCTTTTGGTGGTGCTCCACTGAGATTAACAGCTTGAGGAATAGGGACAAAAGAGGCGTGCGGTTTTTTATTCTCGTGGTATTGGTAGGAGACTTTGCTGTTAGTTCATGTCTGTTAGTAGTTGAAACTTTGTTGGTTTGTGGCTGTTGCTTGCATTCTCTTTTTTTGGTTCTAGTGCATAAATGTCAATGCTATTTGTAGTAGTAGTTCAGTAACTGAACAACTGCAGGAAGTGCTTCATTTTGGTTGACTTTTGTAGGTGGATGCAATTGGTTCAGTTACTATTGTTTGTTGCTGCAATATTGCTCCATTTTGCTCTAATATCTTTTTGCGTGTTGTAATTTTCTTGTTCTGATAAACATTGGTGTATGAATTTCACTTAACTTTTATTTATTTAGTTTCCTTTACTTGACTTTCATGTGCAGATTTGATGTTCTTGGACTTCATGAGTTTGACAGCGATCGCAAGAGGATGTCTGTTATCATTGGCTGTCCTGACAAAACTGTCAAGCTGTTCGTAAAAGGCGCAGATAATTCGATGTTTGGAGTCATCGACAAAACAATGAATCCCGATGTTGTTCGTGCAACTGAGAAGCATCTCCATGCATATTCCTCACTGGGGCTGCGTACACTTGTTATCGGTGTCAGGGAACTTAGCCAGGAAGAGTTTCAGGAGTGGCAAATGGCTTATGAGAAGGCTAGTACTGCATTGCTAGGAAGAGGAGGCCTACTCCGTGGTGTGGCTGCCAACATCGAACAGAACCTGTGCCTATTGGGAGCCTCTGGTATTGAAGACAAGCTGCAAGATGGTGTACCCGAGGCGATCGAAAAACTCAGGGAAGCTGGGATTAAGGTTTGGGTACTAACTGGTGACAAGCAAGAAACTGCTATCTCCATTGGCTTTTCCTGCAAGCTTTTGACAAGGGAGATGACACAGATTGTAATTAACAGTAACTCAAGAGAGTCATGTAGAAAGAGTCTTGATGATGCAATTTCAATGGTTAACAAACTCCGGTCATTATCAACGGACTCACAAGCTAGAGTCCCTCTCGCTTTGATCATTGATGGTAACAGCCTTGTCTACATTTTTGATACAGAACGGGAAGAGAAGGTAATCAATCATACTATGTTTCTGAGTCATCCCAATGAATTCTATTATAAACACATAAATTGCTCATGAATTATCGATTTTGTTGCAGCTTTTTGAAGTGGCAATAGCTTGTGATGTTGTTCTATGTTGCCGGGTAGCTCCCCTACAGAAGGCCGGTATTGTCGATCTAATAAAGAAGCGGACAAGTGACATGACTTTGGCTATTGGAGATGGTACAGTTTTTTTTTCTCGCCAAATATTCAGGAATTACTTGATTTACTATATTATTCTCAATCTGAAAAGAGGTACCTTTCCAGGTGCAAATGATGTATCCATGATTCAAATGGCTGATGTTGGCATTGGCATCAGTGGACAAGAAGGAAGGCAAGCTGTTATGGCATCAGATTTTGCCATGGGACAATTCAGATTTTTGGTTGACCTGTTGTTGGTTCATGGTCATTGGAACTACCAGAGAATGGGCTACATGATCCTATATAACTTCTACAGAAATGCTACTTTCGTATTCGTGCTTTTTTGGTAAGTGCGCTCCTATTTTTGCTATGTTTGCTCGCCTGCTTATAATAATCAAATATTAACTCCTTAATGACTGCAGGTACGTACTTCACACTGGTTTCACCCTGACAACAGCAATAACCGAGTGGAGCAGTGTGTTATATTCTGTGATCTATACTGCTGTCCCAACTATCGTTGTTGCGATTCTCGACAAGGATCTGAGTAGGAGGACATTGTTGAAATACCCCCAACTCTATGGTGCAGGGCAGCGCGAGGAGAGTTACAACCTAAGGCTGTTCATTTTTGTCATGCTGGACTCCATCTGGCAGAGCCTCGCAGTTTTCTTTATCCCTTACCTTGCATACAGAAAGAGTACAATCGACGGTGCGAGTCTGGGAGACCTCTGGACACTAGCTGTTGTCATTCTTGTGAACATTCACCTTGCAATGGATGTCATCAGATGGAACTGGATCACGCACGCAGCAATATGGGGCAGTATAGTCGCAACGCTGATTTGTGTCATGGTCATAGACTCCATACCGATATTGCCTGGTTTCTGGTATGCACTCATTTGAACTATTTTGGTTGCTTTTTTTTCCCCGGATAAATGTATACCTGGTTGCTGACTCTGCATTTGTATGACAGGGCAATATACAAGGTGATGGGAACTGGACTGTTTTGGGCATTGCTGCTCGCGGTAATTGTGGTTGGAATGATTCCTCATTTTGTCGCTAAGGCCATAAGGGAGCATTTCCTTCCGAATGATATTCAGATTGCGAGAGAAATGGAGAAATCTCAAGATTCTCATGATGTCACTCATCCAGAAATTCAGATGAGTACAGTGGCACGAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010822