BGIOSGA010848

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Revision as of 09:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010848| Description = Cipk like protein 1| Definition = Oryza sativa Indica Group BGIOSGA010848, complete gene.| tag = CIPK3| tid = BGIOSG...")
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Gene Name

BGIOSGA010848

Description

Cipk like protein 1

Definition

Oryza sativa Indica Group BGIOSGA010848, complete gene.

LocusTag

CIPK3

Ensembl Transcript ID

BGIOSGA010848-TA

Ensembl Protein ID

BGIOSGA010848-PA

Length

3677

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12854864..12858540

Sequence Coding Region

12858349..12858540,12857377..12857439,12857198..12857269,12856972..12857079,12856810..12856890
,12856663..12856716,12856434..12856559,12856266..12856355,12855850..12855972
,12855646..12855756,12855388..12855501,12855193..12855249,12855039..12855113
,12854864..12854947

Genome Context

<gbrowseImage1> name=IndicaChromosome03:12854864..12858540 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:12854864..12858540 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCACTGCTCTTTATAAAAAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCGCTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGATGCGTATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MYRAKRAALSPKVKRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGELFEIIATNGRLKEEEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKVSDFGLSALTEQVKADGLLHTTCGTPNYVAPEVIEDRGYDGAAADIWSCGVILYVLLAGFLPFEDDNITALYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRHVKEETEDQPTSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGEVEGNGAAA</aaseq>

Gene Sequence

<dnaseqindica>1..192#1102..1164#1272..1343#1462..1569#1651..1731#1825..1878#1982..2107#2186..2275#2569..2691#2785..2895#3040..3153#3292..3348#3428..3502#3594..3677#ATGTATAGGGCTAAGAGGGCTGCATTATCTCCAAAGGTGAAGCGCCGTGTAGGGAAGTATGAGCTCGGGCGCACCATTGGAGAAGGAACCTTTGCAAAGGTCCGGTTTGCGAAGAACACTGAAAATGACGAACCAGTTGCTATCAAAATCCTTGACAAGGAGAAGGTTCAGAAGCACAGATTGGTTGAACAGGTCATTCTCAGGCATTTATTTTTTGGAGCAATTCTCAATCAATTCCCTTATAAGGCATTGCATCAGTTTTTTTATCAATCACTGTGTTCGTCCAATATCTTTAATTCATATATCAGACTAACCTCTGTGATTCAGTCCACTAGGAATATCCTTTTTTGAGGTAAACAGTCCACTAGGAATAAAGTGGTCAAAAATCGAAGTTTCCTATATCGCTTTCAGTAAACCATACAGCCAATCTTACCATCATTTGTAATAGTCAACAAAGTTTACCTCCCAAAAAAATGTATGTTTCTTACGTAATTGACCACATGTGTAATTGAAATATGTGATTTTCTTTCATCAACATTTACTACAATCAACTTGCATCTTTGTATCAAGGAACAAAACTGAAGAAAAAATTTTCTTCCTTGGATGTTGCCGTGCCAGCATGGGAGCATAGGAAGATGTAACTTCAATTAAGAATGATTCCGTGTCCACATGACTACGTACATATTTGCATGACATCGAGATATACCCAAATGGTGATCTTCCAGTTGAAGTCATATTACCAACTCAGTATGTTCTCCTGGTGCCTTGTGCTGTTTCTAATTGCTGTCAACTTTATGAAAAGTTGAAGTAAAAAGAAAGGACCTCATTTTGTACAATTCAAGATATGTTTTGCCCATGCCACATGGATGTTCATGTTCTCAATTCCATTGAATAGGCTTTGCTCTTCATTATACTGTTCTAACCATAGAGATTTTAGACACAGAATAACATTAGATGCAAAAGTTGTGGTTAGAACTCATAACACAAATGTATAGTTTTACATATGTGCAATTCCAAGGAACAAATCACATATACATTTTTGAAAGGAAGAAATTATTTATTTGATATTTTTATGCTCATGCCATTCTAAATTCAATGCAGATTAGGCGTGAAATTTGTACTATGAAGTTAGTAAAGCATCCTAATGTTGTTCGGCTGTTCGAGGTAAAGTCACAAAGTGGCCTGCACTTCATGATTTATCAAACCTCTTAAAAATATGTTTATTCATGCCAACAGTAATAACCTTAGGCTGAAAAATATGTCTACCTCAGGTCATGGGAAGTAAAGCAAGAATTTTCATTGTTCTGGAATATGTTACTGGAGGAGAGCTCTTTGAAATCATTGTAAGTGCCAATTTGAGATCTAAAACTTATGAAAGGATTGCCTGATGTCAGAATATTGATTCATGGTATATTATCATGTTATGTTGATTTTAACTGACATTATATACCAATTACAAAGGCAACTAATGGAAGGTTGAAGGAGGAGGAAGCACGAAAATACTTTCAACAACTTATCAATGCAGTTGACTACTGCCACAGTAGGGGTGTGTACCACAGAGACTTGAAGGTAAAGGCTTAACGTCCTGATCATGAACAAGTGAGCAACAACTGTTATGAGCATATGCTGATCTTTAACATGCGTTTTCAGTTAGAAAATTTGCTGCTTGATGCTTCTGGAAACCTGAAAGTATCTGACTTTGGTTTGAGTGCTTTAACCGAGCAAGTGAAGGTATCATAATGTTCTCAATAATAGTTGCGTTGTTGTTCTTGTTTGGCCTTTTAAATTATCACTGGTCTGATATTATTGAATTCACCTATACAGGCTGACGGTTTGCTGCACACGACATGTGGAACTCCTAATTATGTTGCTCCAGAGGTAATCTTTTTTTTCTTGTCATAGTAGATTAGTATTACACATGTTGATTGCACATTGGCACTACATTAACATTTCTAACATAGTGTTTGATCTGTTCCTGTAGGTGATTGAGGACAGAGGCTATGATGGGGCAGCTGCAGATATCTGGTCTTGTGGGGTAATCCTTTATGTTCTGCTTGCTGGGTTTTTACCATTTGAGGATGACAACATCACTGCTCTTTATAAAAAGGTAATACATACAAAAACTATACAAACACCCAGGTTTTGTGAATGCCATTATTTTTTCTTACTCTCTTCTCGATCACAGATCTCTGAAGCTCAGTTTACCTGTCCCTCTTGGTTTTCTACTGGAGCTAAGAAGCTGATCACCAGAATTCTGGATCCCAACCCTACAACTGTAAGCTTCGTATAAATTTTGAGATCTTATTGCTCAAAGGACTCAGATATACAGTAGGCTAAAACATATCTAAACAGAACTACAAGCATTTTGAGCAAGCAATAATCAGTCGTGGAACGAATGTGGTTTTATGCGTCTATGACTAGGTGGATCTTTCACATTGAAATGAAATTTGTTTACAACCTTGCATCTTTTATTGTTTAACCGAGTCGTTCTGTTAACCTTTTCAATTCCAAAAAGTAGTCATTGAACCCCAATTTACCTGATTTCTGCCATTGTTGAATTTTGTGCAGAGGATCACCATTTCTCAAATACTGGAAGATCCTTGGTTCAAAAAGGGTTACAAACCGCCTGTATTTGACGAGAAATATGAAACTAGTTTTGACGATGTCGATGCTGCTTTTGGAGACTCCGAAGTGAGTCAATTGGACTATTTATTTCAAAACATTCAGCCTCTTGTGGTAGGAATAAGAGGATTAACTTTTTTTTATACATTTACCGATTAACAGGACCGGCATGTCAAAGAAGAAACTGAAGATCAGCCTACCTCTATGAACGCGTTTGAACTCATTTCACTGAATCAGGCGCTGAATCTGGACAATTTGTTCGAGGCAAAAAAGGTCAGATAATTCTGCTCCAATTAGTAAAGTATATTATAACCCTTTCAATATTATAGTTCCCCATTTTTCAGAACCAGTTTGTTTTTGTGAAGTATTTTAAAAACTATCATTGCAGTGGACTAATTAGTGCAAATATTGTTACAGGAGTATAAAAGAGAGACAAGATTCACATCACAATGTCCTCCAAAAGAAATTATCACCAAGATTGAAGAAGCTGCAAAGCCACTTGGATTTGATATTCAAAAGAAAAATTACAAGGTATTCATATAGCCTACTATGTGCACAGAGAAACTTCTCTTACTACTCCCACATACATCAAAAGTTATCAGGAAATAAAGTTCTTACAACCGACTTCCATACCTCGAGTCCTACTAAGTTTGTGTTTGTTCACTCCAGATGCGTATGGAGAACCTGAAAGCAGGTAGAAAAGGCAATCTCAATGTTGCAACTGAGGTAAGTTGAAACCCCATTCTAACAAAATACTGAAAACATCAAGGAACCACTGTTCACTGAGATTTATGACCAATAATAGGTTTTCCAAGTAGCTCCATCCTTACATGTGGTTGAGCTCAAGAAGGCAAAGGGGGACACTCTGGAGTTCCAAAAGGTGCCATTCTTTGACACCGGAAAGTTCGCTATTTCCAACTTGCTATTTACTGCCAAGTTTAACCAAAATCAATTCTGCTGTGAAACAACAGTTCTACAGAACCCTGTCGACCCAGCTCAAGGACGTGGTCTGGAAGTGCGACGGCGAGGTCGAAGGCAACGGCGCCGCGGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010848

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA010848&oldid=55671"