BGIOSGA010862

From RiceWiki
Revision as of 09:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010862| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010862, complete gene.| tag = OsI_112...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010862

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010862, complete gene.

LocusTag

OsI_11296

Ensembl Transcript ID

BGIOSGA010862-TA

Ensembl Protein ID

BGIOSGA010862-PA

Length

4682

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12477955..12482636

Sequence Coding Region

12482604..12482636,12482073..12482102,12481391..12481482,12481024..12481163,12480873..12480910
,12480366..12480524,12479778..12479927,12479443..12479698,12479237..12479352
,12478879..12478959,12478707..12478795,12478551..12478613,12478389..12478445
,12478192..12478288,12477955..12478113

Genome Context

<gbrowseImage1> name=IndicaChromosome03:12477955..12482636 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:12477955..12482636 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCTCGACCTCCCTCACGCCGGGCCAGGGATGTGGATCAAAGGGTGTAAATCATCAGGTCTCTGCTCTTCTGGGATTTCTTTGGGTTTTCACCGCCTGGGCATATGCGGAGGTTCTCTATTATAGGAAGAATGCTGCTTCTATTAAAGCTAGACACTCGGATGTAAATTTAGCAGTAATGGATTCTAGCTCAAACAAAGGAGAGGAGTCAAGTGATGTTATTGGAGGAGGGTGTCCAAGCACCCAGTGCAAAAGCCAGTTTATGCTTCTCTCACATCACAAATGTTCAGGCACTTATTCTAGAGAATCGATTGACGTTGAGAGCAATAATTACAGCCGAGATATGTTCCTTTTCCTTTACTTTCTTCTTATTATCGTAGCAGCTATGACTTCTTTCAAGGTCCACCAAGACAAGTCGTCATTCACGGGGAAATCTATACTGTATCTGAATAGGCACCAAACTGAGGAATGGAAGGGTTGGATGCAGGTGCTGTTTTTGATGTACCACTACTTCAATGCTAAAGAGATATACAATGCAATTCGTGTGTTCATTGCTGCATATGTCTGGATGACTGGATTTGGTAACTTCTCCTATTATTATGTGCGGAAGGATTTCAGCCTTGCACGATTTGCTCAGATGATGTGGCGCCTCAATTTTTTCGTGGCATTCTGTTGTATTGTGCTAAATAATGACTACACCCTCTATTATATTTGCCCTATGCACACACTTTTTACCCTTATGGTTTATGGTGCTCTTGGAATACTAAATAAGTATAACGAGATTGGATCAGTGATGGCTATAAAGTTTGTTGCCTGCTTTTTGGTGGTTATCCTGATATGGGAAATCCCAGGAGTCTTCGAGATTGTCTGGAGCCCATTCACGTTTCTTCTCGGCTATACTGATCCATCTAAACCTGATCTCCCTCGATTGCATGAGTGGCATTTCCGATCTGGACTGGATCGCTATATATGGATTGTGGGGATGATTTATGCTTATTACCATCCAACTAAGTGGATGGAGAAGCTTGAAGAAGCTGAAACGAAAACTAAACTCTATATTAAGCCCTTGATAGTTTCAATTGCTTTAACGGCTGGTTGTTTGTGGTACGAGTACATTTATAAGCTAGACAAGATTACCTACAACAAATACCATCCCTATACATCCTGGATCCCCATAACTGTGTACATCTGCTTACGCAACTTCACTCAAGAATTCCGGTGCTGCTCTCTCACACTATTTGCCTGGCTCGGAAAGATTACCTTAGAAACGTACATATCACAGTTCCATATTTGGCTCAGATCAAAAGTGCCCAATGGGCAACCTAAATGGCTATTGACAATAATCCCAAATTACCCAATGCTGAATTTCATGCTCACAACTGCTATATATGTTGCAGTCTCCCATAGGCTATTTGAGTTGACTAACACCTTGAAGATCGCATTTGTGCCTAGTCGTGACAACAAGCGCCTCTCGTACAATTTTGTGGCGGGAATTGCAATTTCAGTGGCGCTATATTCTTTATCATTTCTTATAGTTGGCGTTGCAGGATACTAG</cdnaseq>

Protein Sequence

<aaseq>MAASTSLTPGQGCGSKGVNHQVSALLGFLWVFTAWAYAEVLYYRKNAASIKARHSDVNLAVMDSSSNKGEESSDVIGGGCPSTQCKSQFMLLSHHKCSGTYSRESIDVESNNYSRDMFLFLYFLLIIVAAMTSFKVHQDKSSFTGKSILYLNRHQTEEWKGWMQVLFLMYHYFNAKEIYNAIRVFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVAFCCIVLNNDYTLYYICPMHTLFTLMVYGALGILNKYNEIGSVMAIKFVACFLVVILIWEIPGVFEIVWSPFTFLLGYTDPSKPDLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTKWMEKLEEAETKTKLYIKPLIVSIALTAGCLWYEYIYKLDKITYNKYHPYTSWIPITVYICLRNFTQEFRCCSLTLFAWLGKITLETYISQFHIWLRSKVPNGQPKWLLTIIPNYPMLNFMLTTAIYVAVSHRLFELTNTLKIAFVPSRDNKRLSYNFVAGIAISVALYSLSFLIVGVAGY</aaseq>

Gene Sequence

<dnaseqindica>1..33#535..564#1155..1246#1474..1613#1727..1764#2113..2271#2710..2859#2939..3194#3285..3400#3678..3758#3842..3930#4024..4086#4192..4248#4349..4445#4524..4682#ATGGCCGCCTCGACCTCCCTCACGCCGGGCCAGGTGAGCCCTAAATCGCACCGTCGATCCGGGGAGGGGGGGCTGCTGCTCTGTTGTTGGTGCGGGTGCGGGGACCGCGCGGCATTTGCTGCCCCCTAGGCGATTTCGTCGGGGGAATCCGCGGTTGGCGAGGTGGCTCGAGGATTTCGTCGGGGGGAATGGGAAGGCATCGCCCTTGTGCCGGGCGCCGGGCGCGGCCGCGGCCGCGGAAGTGCGGCTTGGGTTTTGGGTTTAGGTGGCTGGGACTGGGAGGAAGCGCGCTGGAGATGATGGCATGCGCGTGGAATCTCTGGCGGGAGCTTGTGTTGCTTTAACGCTGCTGTTGGCTAAATTGGCGGGATTGGGTGATGATCGGTGAGATGGTTGTGGATATCGGTTGGTTGTCTGGTTTGCTTTTTTGTTGATACGACAAGTATTAGTGCTAGGTTTTAGGATTCGGTGGTATTCGGATAGGAGGCTAACTATTTTGGCTGATGCGGGATTTGAATTTGTGGCTGGTTTCAGGGATGTGGATCAAAGGGTGTAAATCATCAGGTCATAGCTGTGCTTTTGTATGGTAGGCTAGTAGCACCAAATATATGGTGGAGGTTTCCATTCATCCGAGCTGTTGGAAAATTGGCGATATAATAGCTTATATGTAGGGTTTAAGGTTGGAAATTCGTAAGTGGCTGCGGTTTCAGATCTGGAGGTATTGGATGTTAGAGTAAGACCGTCATTAAGATCTGGCAGCATGGGCTATTCTGTTATATTTTCTAAGAGATGGTAGCAGTATCGATGTGCTGACCAACCTGTTAGAATTGGTGTCAATCTGCTTGATTTTCTAGCGCACGGTTGTTCCTTACTTTGGTAGTTGTTAGGAAGTTCAGGTTGGTAAAAATACTAAAACTAGATAGTAATTTAGTTGCAGAAATACATATTGGTGTGGATTGCAAGAATCCGGACTATGATGAGCTACTTTTACCCCACAAGTTCAAATAACACAATTACAGTGTTTGATTGCAACTTGAAAGCCGTAGAACTATTGTCTACTATACAGATGACTGAGTGATATTCTTCTAATAGTAGGATTTTGTTTTGGGGGTCCTCAATCACTGGATCTGAGATAGCTGGCAACTTTCTGACAGGTCTCTGCTCTTCTGGGATTTCTTTGGGTTTTCACCGCCTGGGCATATGCGGAGGTTCTCTATTATAGGAAGAATGCTGCTTCTATTAAAGCGTAAGTAATTGTGACAGCTATATTTACAGTTCTGGTATCCATGCATTTTAATTTTCGTATATGCTAAGTGATATACTCTCATGTTGCCACTGAGATTGAAATATCTACTTATGTTACAAGAAGCATAACTCAAGAGTTGTACTTCGTCTGGACTGAATGTGTGCTGCACCATTATTTTGCTTGAAATGTACCACTTATTGGAATTTCTGTTTCTTTATCTTTGTTAGTAGACACTCGGATGTAAATTTAGCAGTAATGGATTCTAGCTCAAACAAAGGAGAGGAGTCAAGTGATGTTATTGGAGGAGGGTGTCCAAGCACCCAGTGCAAAAGCCAGTTTATGCTTCTCTCACATCACAAATGTTCAGGTTGTTTGTGATGTATGATTTCTCCTTCATGTTGTATATAAACGTTGAGATATCAACATTACTAAGGCACTGACAAAGATAATCTGTTGCACAGACTTTTCTTGTTGGACCAGGCACTTATTCTAGAGAATCGATTGACGTTGAGAGCAATGTAAGCTACAGCTGCATCTTGCATTCACGTGTTCTTCTATGTTGCATTATTTGGCTGAGCAGTTATTATTTTTTCAGATCTGAGTTTGGAGGTCATCTGCTTTACTTTTACTATGTGATCGCACAAATCTACTGGGAGAGTCTGCGAAGGTGCTATTACATTGATGTTTATTACAAGCCTGATTGCACGTTTGAAAAGTAGTTGCAAAAATATTGTATCTAGTTGAGATATCTTTTACGAGTACATTCTAAGCCTTACTAATATTTCATGGAAAGTGCCTATATAATGTGCTGTTCTTTCAATGGGACATTTTTTGTTCTGACCTTTTCTGTGATCCTGTATCTGCAGAATTACAGCCGAGATATGTTCCTTTTCCTTTACTTTCTTCTTATTATCGTAGCAGCTATGACTTCTTTCAAGGTCCACCAAGACAAGTCGTCATTCACGGGGAAATCTATACTGTATCTGAATAGGCACCAAACTGAGGAATGGAAGGGTTGGATGCAGGTATCTTTTTTGGGGAAAAAAAAACTCCGTCTTCTTTTTCATATATTTATGGGGTATCTTATACTAGTTGGCTTCTGTTTGTGCATAACACTAATTTATCATAAGTCAGAACTATGCAAAGAGGGTATAAATGCATTCAGTATTAAACATCTTTTGTCATATTGTTGGTTTCCGTTTGTGCATAATACTAATTTATCAGAACTCAGAACTCAGAACTATGCAAAGAGGATATAAATGTGTTCATTATTAAACATCTTTTGTCATATTGTTCTACATGTATGCTTACCTAGTCTTCATTAATGAACCTCTCTTAGTTTTAGTAAGTTAATTAGTCAATGCTCAATGCCTCAATAGCATACATGTGTGGTTAGTAAGTTTTTCATCTATGTTCAAGTGCATGCATATCACTTGTTTTCAGCATTGATTTCCCTCATTCAGGTGCTGTTTTTGATGTACCACTACTTCAATGCTAAAGAGATATACAATGCAATTCGTGTGTTCATTGCTGCATATGTCTGGATGACTGGATTTGGTAACTTCTCCTATTATTATGTGCGGAAGGATTTCAGCCTTGCACGATTTGCTCAGGTTCATTCTTAGACCCTTCATTCCCCTTCATTCTTTCTTCCATAAGTAGGACCTTCCTGACATGTTCTCACCTTGACAGATGATGTGGCGCCTCAATTTTTTCGTGGCATTCTGTTGTATTGTGCTAAATAATGACTACACCCTCTATTATATTTGCCCTATGCACACACTTTTTACCCTTATGGTTTATGGTGCTCTTGGAATACTAAATAAGTATAACGAGATTGGATCAGTGATGGCTATAAAGTTTGTTGCCTGCTTTTTGGTGGTTATCCTGATATGGGAAATCCCAGGAGTCTTCGAGATTGTCTGGAGCCCATTCACGTTTCTTCTCGGTAAGTTTTCTCTGTAAACTTTTAGTGAGTTTGATAGTTTATATATATATTTTTAGTAAGGATGATCAATGTAATTTACCTTGTGTGCAGGCTATACTGATCCATCTAAACCTGATCTCCCTCGATTGCATGAGTGGCATTTCCGATCTGGACTGGATCGCTATATATGGATTGTGGGGATGATTTATGCTTATTACCATCCAACTGTATGTTTCCTGCCAACTGTGCTATACTTTTACATAGTGTTCAGTTATAGATGTTCTATTTCTTTAGTTTTATCACATTTCATGAATCGCATAAAAGTTGTTTGTATGAGTGCATGTCTCTGCACGCCTGCGCATATGCATGTGTGAGAGAAATGTGCTGATATAAATTTTCTGGTTCTTTCAGTTTTGAGGGTGTTTGAGTCATTTGTAAAATTGTGGGCATACGAGAGAATAGTATTTTACCTTCATAAATCATTTGTTTGTGTTGCACGTTGAGAAGTGGATGGAGAAGCTTGAAGAAGCTGAAACGAAAACTAAACTCTATATTAAGCCCTTGATAGTTTCAATTGCTTTAACGGTAATTATCAAATAACTGAATAAGCCACTTATTGTTGCATATCCATCTTTTGGTAAGACCACCTTGCTTTACTGTGATCACAGGCTGGTTGTTTGTGGTACGAGTACATTTATAAGCTAGACAAGATTACCTACAACAAATACCATCCCTATACATCCTGGATCCCCATAACGTATGTATTTTTTCCATATCGATTTTTTTTTTTTAAAAAAAATCCTTGGTGTACTGCAATAACTGATTGCTCAATGCTTATTGTACTCAAAAGTGTGTACATCTGCTTACGCAACTTCACTCAAGAATTCCGGTGCTGCTCTCTCACACTATTTGCGTAAGTTTTGTGTTTGTGAAGCATGTTCCACTTTTATGTTGGACTTTATCTTACTGTAATGCGATATTGTGAATATGCAATTAATGTACTCTTCATCTGTGCTAGCTGGCTCGGAAAGATTACCTTAGAAACGTACATATCACAGTTCCATATTTGGCTCAGGTAACCAGCTGCTGTCTCTACAATATTACCTCCGTGGTTCGTGCCACTAGAAGTTCCTCTTGTTCTTGTCAATGACTGAAAATTGTCTTTACTCCTGCAGATCAAAAGTGCCCAATGGGCAACCTAAATGGCTATTGACAATAATCCCAAATTACCCAATGCTGAATTTCATGCTCACAACTGCTATATATGTTGCAGTAAGTAGATCTTCCCTGTGACTTTGAAGAGTTTAGACCTTACAGGGAACCTGCTTATGTTATAACTTATTCCTACAGGTCTCCCATAGGCTATTTGAGTTGACTAACACCTTGAAGATCGCATTTGTGCCTAGTCGTGACAACAAGCGCCTCTCGTACAATTTTGTGGCGGGAATTGCAATTTCAGTGGCGCTATATTCTTTATCATTTCTTATAGTTGGCGTTGCAGGATACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010862