Os12g0273266

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0273266| Description = Disease resistance protein family protein| Version = NM_001189967.1 GI:297729064 GeneID:9270418| Length = 3794 bp| ...")
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Gene Name

Os12g0273266

Description

Disease resistance protein family protein

Version

NM_001189967.1 GI:297729064 GeneID:9270418

Length

3794 bp

Definition

Oryza sativa Japonica Group Os12g0273266, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10009560..10013353

Sequence Coding Region

10009560..10009881,10010000..10011586,10012557..10013353

Expression

GEO Profiles:Os12g0273266

Genome Context

<gbrowseImage1> name=NC_008405:10009560..10013353 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:10009560..10013353 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggagctatagtgagtgtttcaactggtgccctgagcaccctgcttcctaagctctccctgttgatccaaggggagtacaagcttctcaaaggcgtgaagggtgggatctcctttctgaaggatgagctgaccagcatgcatacccttctagtgaagctggcaaacaacgaggagaacttggatgagcaggtgaaggattggaggaacaaggtgcgtgagctgagctatgatattgaagactgcatcgaccttttcctgcacaaggtgagcagttctaatgctaaagcgggccttgtccggaagacggcagctaaaattagaaagttatggtcgcgccacaaaatcgcaaacctaattgaagaacttaaggctcgtgttatagaagaaagtgatcgccgtttgagatataattttgaagaagttgctgataattttagccatgttcaaattgatcctcgactgccagcactctatgtggaagcagagaagcttgttaggattgatggtcctagagagaagattatcgagtggctggaaaaagatgaatctcagaaactcaaagtagtatgcattgtgggctttggaggtcttggaaagacaactcttgcaaaccaagtttatcacaaaatgaaaggtcaatttgattgttcttcttgcatgccagtttcacggaatcctaatatgacaaagatactagttgatttgctcaaagaattgggaagtcgtgttgatacatcagatgatgagcgtcagctcatatgcaagctcagaacattcctacaacgtaagaggtacttggtcattgttgatgatatttggagcgcaaaagcatgggaagttgtcaaatgtgctctcccagagaacaatttatgcagtagagtaatttcaacgacaagaaatgcagatgttgcaacatcatgctgctcctgtttagcaggatatatccataacatgcagcccttaactgagcaggactctcagaagctattttttaagaggatttttggggacaagtcagcatgccctccttaccttgaacaagtctcccatggaatcattagcaagtgccatgggttgccattagctattatcagtatagctagcctgctagctggaaaatcacatatgaaggagcaatgggagcaagtgcacaattctattggttttgtgtttagtcaacaaggaattagagatatactgctgcttagctactatgatcttccgataaatctgaaaacttgcttgctatatcttagtgtgtttccagaggattacaagattgatagagaagagctaatatggagatggatagctgaagggttcatcagtgaagtgaagggtcaaacactggatcaaattgctgataattacttcaatgatcttgtaaacagaagcatgatccaaccatttgacatcaagtacgatggcagggcagatgcttgtaaactgcatgatatggtgctcgaccttataatttccctgtcaacacaggagaatttcacaaccataatggaagggcaacaatataaatgttcttctaataagattcgtaggctgtcagtacattcaaaatatctggaagatgaagtaatgcaggagattatgatgaattgctcgcaagttcgttccatcagcttctacgaattgcaagatcaggaaattagtcttctctcaactcttaattctttgagagtgctagcttttaataattcccaccatcttggtaacaaaagcattaaatatcttggaaggtttttccagctgacatatttgagcatcgcttctcgtggtatcactgatcttccagagcaaataggaggtctgcagaatctactgacactagacattcgtggcagtagtgttgaaaaattgccatcaacaataggttgtttgaaaaatctggtgcgtctacttgtaaatgaagctgtgaaattgcccaatgaggttggagatctacaagccttgcagcagctgtcatttgctggtaactataattccatagtatttgtggaacagctgaagcggttggcaaacctaagggcgatttccatacgactgcatgatagcgcacgacttggtcatcatgatatggcaaggtatatggaagctttgaagtcatctcttgctgtgatggataaacaagggatccaatcattggaaatatcctgctttgatagtgtgataggagaaaaactcatggatttattatgctactcaccatgcctccaaaggcttgtcatacatggttgttgtatcggtctgctatcaaagcagatgacgttgcttgttaacctcaggcatcttgaaatatgggttagaaacattaagcaggacgatctctgcgttctaggaagcatacccactctgctcttcttcagggagcaatgcctgagctccgatggttctcttgaattccgcgcacatgaatcagactgcaagatgggttttgagttcagcttaaagcaccttgcaagcctggagcacctcaaagtcacaattttttgccatgttgccaccagaagccgggtggaggctgcagaagcttcggtcaggaatgcagccagtgcccacccagggtgtcccatatttgaaatcaatagatgtggggaacaaaacatggtagatgataaggtcgacaaggaggagatactcaaggatatagatgctcatgaagtggttcggcgtgacatgaataactga</cdnaseq>

Protein Sequence

<aaseq>MAGAIVSVSTGALSTLLPKLSLLIQGEYKLLKGVKGGISFLKDE LTSMHTLLVKLANNEENLDEQVKDWRNKVRELSYDIEDCIDLFLHKVSSSNAKAGLVR KTAAKIRKLWSRHKIANLIEELKARVIEESDRRLRYNFEEVADNFSHVQIDPRLPALY VEAEKLVRIDGPREKIIEWLEKDESQKLKVVCIVGFGGLGKTTLANQVYHKMKGQFDC SSCMPVSRNPNMTKILVDLLKELGSRVDTSDDERQLICKLRTFLQRKRYLVIVDDIWS AKAWEVVKCALPENNLCSRVISTTRNADVATSCCSCLAGYIHNMQPLTEQDSQKLFFK RIFGDKSACPPYLEQVSHGIISKCHGLPLAIISIASLLAGKSHMKEQWEQVHNSIGFV FSQQGIRDILLLSYYDLPINLKTCLLYLSVFPEDYKIDREELIWRWIAEGFISEVKGQ TLDQIADNYFNDLVNRSMIQPFDIKYDGRADACKLHDMVLDLIISLSTQENFTTIMEG QQYKCSSNKIRRLSVHSKYLEDEVMQEIMMNCSQVRSISFYELQDQEISLLSTLNSLR VLAFNNSHHLGNKSIKYLGRFFQLTYLSIASRGITDLPEQIGGLQNLLTLDIRGSSVE KLPSTIGCLKNLVRLLVNEAVKLPNEVGDLQALQQLSFAGNYNSIVFVEQLKRLANLR AISIRLHDSARLGHHDMARYMEALKSSLAVMDKQGIQSLEISCFDSVIGEKLMDLLCY SPCLQRLVIHGCCIGLLSKQMTLLVNLRHLEIWVRNIKQDDLCVLGSIPTLLFFREQC LSSDGSLEFRAHESDCKMGFEFSLKHLASLEHLKVTIFCHVATRSRVEAAEASVRNAA SAHPGCPIFEINRCGEQNMVDDKVDKEEILKDIDAHEVVRRDMNN</aaseq>

Gene Sequence

<dnaseqindica>3473..3794#1768..3354#1..797#atggctggagctatagtgagtgtttcaactggtgccctgagcaccctgcttcctaagctctccctgttgatccaaggggagtacaagcttctcaaaggcgtgaagggtgggatctcctttctgaaggatgagctgaccagcatgcatacccttctagtgaagctggcaaacaacgaggagaacttggatgagcaggtgaaggattggaggaacaaggtgcgtgagctgagctatgatattgaagactgcatcgaccttttcctgcacaaggtgagcagttctaatgctaaagcgggccttgtccggaagacggcagctaaaattagaaagttatggtcgcgccacaaaatcgcaaacctaattgaagaacttaaggctcgtgttatagaagaaagtgatcgccgtttgagatataattttgaagaagttgctgataattttagccatgttcaaattgatcctcgactgccagcactctatgtggaagcagagaagcttgttaggattgatggtcctagagagaagattatcgagtggctggaaaaagatgaatctcagaaactcaaagtagtatgcattgtgggctttggaggtcttggaaagacaactcttgcaaaccaagtttatcacaaaatgaaaggtcaatttgattgttcttcttgcatgccagtttcacggaatcctaatatgacaaagatactagttgatttgctcaaagaattgggaagtcgtgttgatacatcagatgatgagcgtcagctcatatgcaagctcagaacattcctacaacgtaagaggtatgtagaaaaactgcaaatggtgtttttccatatattttgaccctgcttgcgtatatttcccatgttaaaatagctatcagtgtaaagctcttgtagagtctgaccttcaatttttgctagattgcaatatctttgcaagaaaaaaaaaagaaaaacttgatgggcactccgctcattggtgcttgcttaacatttgcatgatgaaatgtaaaatgaaaggggcaatctgcacagaaaaggtagaacctttaagcaaaggctaaaaatagtgatagtgtggcttattcattggtcataaaaataaaccatccatagtttcagtgattatgttaaggattagatatataagcaatgcaatactggaacgaataacatggcattgaacttaaggtcttgtatttacatctatgccaaatattacaaaagtagtttgttaaagttgagaagtgatttggcacaatttatataaagtgccgagttcatcgtaaaaataatactccttccgtttcatattataagtcttttgattttcttagtcaaagttcttgaaagtttgaccaagtgtatcgaaaaatatagcaacacttgtagcactaaatcagttgaaaatattgctatatttttccataaacttggtcaaacattcaaaaagtttgacttgaaaaattaagacgacttgtaatatgaaatagaggtagtaatagcaagtctggtgtgtgggcatctcaggcagggaatacatgctgtagctgcaacaaatgacaaactccaccttaattaaatattggtttcctttcacctaaatggccaatctattaaacttttacaatctagttctcaaaaggaattgatggtttttggagcagggcagcatggcatttgccaaaaatgactgcacaatatatagcttgttcattttaaactctatgatttattaaccagatcacattttctcaatgctaaccaggtacttggtcattgttgatgatatttggagcgcaaaagcatgggaagttgtcaaatgtgctctcccagagaacaatttatgcagtagagtaatttcaacgacaagaaatgcagatgttgcaacatcatgctgctcctgtttagcaggatatatccataacatgcagcccttaactgagcaggactctcagaagctattttttaagaggatttttggggacaagtcagcatgccctccttaccttgaacaagtctcccatggaatcattagcaagtgccatgggttgccattagctattatcagtatagctagcctgctagctggaaaatcacatatgaaggagcaatgggagcaagtgcacaattctattggttttgtgtttagtcaacaaggaattagagatatactgctgcttagctactatgatcttccgataaatctgaaaacttgcttgctatatcttagtgtgtttccagaggattacaagattgatagagaagagctaatatggagatggatagctgaagggttcatcagtgaagtgaagggtcaaacactggatcaaattgctgataattacttcaatgatcttgtaaacagaagcatgatccaaccatttgacatcaagtacgatggcagggcagatgcttgtaaactgcatgatatggtgctcgaccttataatttccctgtcaacacaggagaatttcacaaccataatggaagggcaacaatataaatgttcttctaataagattcgtaggctgtcagtacattcaaaatatctggaagatgaagtaatgcaggagattatgatgaattgctcgcaagttcgttccatcagcttctacgaattgcaagatcaggaaattagtcttctctcaactcttaattctttgagagtgctagcttttaataattcccaccatcttggtaacaaaagcattaaatatcttggaaggtttttccagctgacatatttgagcatcgcttctcgtggtatcactgatcttccagagcaaataggaggtctgcagaatctactgacactagacattcgtggcagtagtgttgaaaaattgccatcaacaataggttgtttgaaaaatctggtgcgtctacttgtaaatgaagctgtgaaattgcccaatgaggttggagatctacaagccttgcagcagctgtcatttgctggtaactataattccatagtatttgtggaacagctgaagcggttggcaaacctaagggcgatttccatacgactgcatgatagcgcacgacttggtcatcatgatatggcaaggtatatggaagctttgaagtcatctcttgctgtgatggataaacaagggatccaatcattggaaatatcctgctttgatagtgtgataggagaaaaactcatggatttattatgctactcaccatgcctccaaaggcttgtcatacatggttgttgtatcggtctgctatcaaagcagatgacgttgcttgttaacctcaggcatcttgaaatatgggttagaaacattaagcaggacgatctctgcgttctaggaagcatacccactctgctcttcttcaggttatttgtagtatgtggacctgatgaaaggcttgccatcagcagccatcaattccgatgcctcaagcagttcatcttcgtaagttacggaggtgggctggagatgttgtttatgcagggagcaatgcctgagctccgatggttctcttgaattccgcgcacatgaatcagactgcaagatgggttttgagttcagcttaaagcaccttgcaagcctggagcacctcaaagtcacaattttttgccatgttgccaccagaagccgggtggaggctgcagaagcttcggtcaggaatgcagccagtgcccacccagggtgtcccatatttgaaatcaatagatgtggggaacaaaacatggtagatgataaggtcgacaaggaggagatactcaaggatatagatgctcatgaagtggttcggcgtgacatgaataactga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0273266, RefSeq:Os12g0273266