Os12g0273800

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Revision as of 10:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0273800| Description = Peptidase C1A, papain family protein| Version = NM_001073089.2 GI:297613008 GeneID:4351963| Length = 1123 bp| Defin...")
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Gene Name

Os12g0273800

Description

Peptidase C1A, papain family protein

Version

NM_001073089.2 GI:297613008 GeneID:4351963

Length

1123 bp

Definition

Oryza sativa Japonica Group Os12g0273800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10052472..10053594

Sequence Coding Region

10052472..10052937,10053428..10053594

Expression

GEO Profiles:Os12g0273800

Genome Context

<gbrowseImage1> name=NC_008405:10052472..10053594 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:10052472..10053594 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccatctccaagccattgctccttgccatcctctgctgcatcgtctgcctctacagcagcagcggcggcgccattgtcgcggcggcgcgtgagctcggcggcgacgcagccatggcggcgaggcacgagaggtggatggcgcagcacggccgtgtgtacaaggacgccgcggagaaggcgcggcggctcgaggtgttcaaggccaacgtcgcgttcatcgagtcgttcaacgccggtggcaagaacaggtactggctcggcgtcaaccagttcgccgatctcaccagcgaggagttcaaggcgaccatgaccaacagcaaggggttcagtactcctaataatggtgttagggtatcaactgggttcaagtatgagaatgttagtgccgatgctttgcctgcgtccgtggactggaggaccaaaggtgccgtcactcgcatcaaggaccaaggccaatgtggaggaggtagaagtatgacagtttcccaaactccagtcaccctatccaatctggagggaagagtagcaaatcatcacaggttcagcaccggtacaggtgctcaagctgagatgaagtgcatggtggtagagctgaagtcgttgctggtgcaattcactcttaattga</cdnaseq>

Protein Sequence

<aaseq>MGAISKPLLLAILCCIVCLYSSSGGAIVAAARELGGDAAMAARH ERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFADLTSEEFK ATMTNSKGFSTPNNGVRVSTGFKYENVSADALPASVDWRTKGAVTRIKDQGQCGGGRS MTVSQTPVTLSNLEGRVANHHRFSTGTGAQAEMKCMVVELKSLLVQFTLN</aaseq>

Gene Sequence

<dnaseqindica>1..466#957..1123#atgggcgccatctccaagccattgctccttgccatcctctgctgcatcgtctgcctctacagcagcagcggcggcgccattgtcgcggcggcgcgtgagctcggcggcgacgcagccatggcggcgaggcacgagaggtggatggcgcagcacggccgtgtgtacaaggacgccgcggagaaggcgcggcggctcgaggtgttcaaggccaacgtcgcgttcatcgagtcgttcaacgccggtggcaagaacaggtactggctcggcgtcaaccagttcgccgatctcaccagcgaggagttcaaggcgaccatgaccaacagcaaggggttcagtactcctaataatggtgttagggtatcaactgggttcaagtatgagaatgttagtgccgatgctttgcctgcgtccgtggactggaggaccaaaggtgccgtcactcgcatcaaggaccaaggccaatgtggtaagtagaaaataaccgagatgcacttggtagtgtagtggtaaggtatgtggtttgaacattaacatcccgtgtttaattcttaaaacggtcacaattccttctaattatttgataatcaagtttctccttggttatcattatatttcccctcattttaagtacacaaataacctccttggttgtcctcattttagtacacaaataaccaaggtcaaagcatgaaaaaataatccatctttcatcttaatttgtgaacaatatgatggcacgtcggctgtttttcatcgttaattgatgagtaaattgcagtttgggtcatgtatttttacctttgttgcagcttggacagggtcttagccatgattttcgctttgcaccacataaccttaccatttgtttcactttacaccacacctcatcttctccaagtcaggcagccctattatcctctctcccaacctgttctcgttattctatcaccgatcaggaggaggtagaagtatgacagtttcccaaactccagtcaccctatccaatctggagggaagagtagcaaatcatcacaggttcagcaccggtacaggtgctcaagctgagatgaagtgcatggtggtagagctgaagtcgttgctggtgcaattcactcttaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0273800, RefSeq:Os12g0273800