BGIOSGA010909

From RiceWiki
Revision as of 09:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010909, complete gene.| tag = OS03G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010909, complete gene.

LocusTag

OS03G0300200

Ensembl Transcript ID

BGIOSGA010909-TA

Ensembl Protein ID

BGIOSGA010909-PA

Length

3110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11600240..11603349

Sequence Coding Region

11603101..11603349,11602912..11602995,11602690..11602823,11602520..11602617,11601876..11601964
,11601693..11601786,11601459..11601616,11601289..11601359,11600989..11601103
,11600240..11600407

Genome Context

<gbrowseImage1> name=IndicaChromosome03:11600240..11603349 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:11600240..11603349 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCCAACGCCGAGAAGCTTCGTGGTCTCACCATCACCTCGCTGGATGAGGAAGACGACGAGCCCGAACTGCCCCACCGATCCCCACCCGCCAGCGGCGGCGGCGGAGGCGGCGGCGCGGGCTACGAGGACGACGACGAGGAGGAGGAGGAAGAGGCGGAAGTGACGCTTGGTTTTCTGGAGAAGCCGAAGCACCCGGGCCTCCTCCTCCGCCACCTGTTCCCTAGCAAGGCCGGAGGCATCCCGGCGTGGTTGGATCCTGTGAACTTGCCATCGGGGAACTCGCGTTGCTGCGGCTTCTGCGGCGAGCCCCTGCAGTTCGTCCTCCAGATATATGCACCGATTGAGGACAATGCGGCATCATTTCACCGCACTTTGTTCATGTTCATGTGCCCGTCAATGGCATGCTTACTCCGAGACCAGCACGACCAGTGGAAACATAGACAAGGCAATCCGTGTAGAAGCGTGAAGGTTTTCCGGTGCCAGCTTCCCCGTAGTAATGCCTTCTACTCAAGTGAACCACCAAAGCACAATGATTCTGACAAGCCACTATGTCCAGGAGCTCCTGTCTGCCATTGGTGCGGTACATGGAAAGGTGATAAAATCTGTAGTAGCTGCAAGAAAGCACGCTACTGCTCTGAGAAGCATCAGACACTGCACTGGCGCTCTGGCCATAAGAGTGATTGCCTACAGTTAATCAGTTCTTCTGAAGCTTCAAGCTCTATTTTTCCTGCTGTAGGAAAAGTTCCTGCTAGCAAATCTTGGCCAGAATATGAGATTGCAATCGACTATGAGGGTGCTTTCGATTCTGACAGTTGTGATGAGAGTAACTCGAAGTCCTTGGTGATGCAAAGACCTGGTAAACCAGATGATATGATGCAGTCATGGATGGATCAATTTGAGGCTGATGCTGACAACAAATGCTGGGCGTCTTTTCAAGAGCGGGTCTCAAGAGCACCAAAGCAAGTATTGAGATACTGTCGAGAAGAGAATGCCAAACCTCTATGGGCGTTATCGGCTGGTTGTCCATCAAATGCCGATATCCCATCATGTAGCTACTGTAGAGGTCCACTATGCTATGAATTTCAGATAATGCCACAGCTACTTTATTACTTTGGTGTGAAAAATGAGCCAGACTCTCTTGATTGGGCAACAATTGTTGTGTACACATGTAAAGGATCATGCGATCAAAATGTCAGCTACAAGGAGGAATTTGCATGGGTTCAGTTATACCCTACAACAACCACAAGGTCATGA</cdnaseq>

Protein Sequence

<aaseq>MESNAEKLRGLTITSLDEEDDEPELPHRSPPASGGGGGGGAGYEDDDEEEEEEAEVTLGFLEKPKHPGLLLRHLFPSKAGGIPAWLDPVNLPSGNSRCCGFCGEPLQFVLQIYAPIEDNAASFHRTLFMFMCPSMACLLRDQHDQWKHRQGNPCRSVKVFRCQLPRSNAFYSSEPPKHNDSDKPLCPGAPVCHWCGTWKGDKICSSCKKARYCSEKHQTLHWRSGHKSDCLQLISSSEASSSIFPAVGKVPASKSWPEYEIAIDYEGAFDSDSCDESNSKSLVMQRPGKPDDMMQSWMDQFEADADNKCWASFQERVSRAPKQVLRYCREENAKPLWALSAGCPSNADIPSCSYCRGPLCYEFQIMPQLLYYFGVKNEPDSLDWATIVVYTCKGSCDQNVSYKEEFAWVQLYPTTTTRS</aaseq>

Gene Sequence

<dnaseqindica>1..249#355..438#527..660#733..830#1386..1474#1564..1657#1734..1891#1991..2061#2247..2361#2943..3110#ATGGAGTCCAACGCCGAGAAGCTTCGTGGTCTCACCATCACCTCGCTGGATGAGGAAGACGACGAGCCCGAACTGCCCCACCGATCCCCACCCGCCAGCGGCGGCGGCGGAGGCGGCGGCGCGGGCTACGAGGACGACGACGAGGAGGAGGAGGAAGAGGCGGAAGTGACGCTTGGTTTTCTGGAGAAGCCGAAGCACCCGGGCCTCCTCCTCCGCCACCTGTTCCCTAGCAAGGCCGGAGGCATCCCGGTGCGTACGGATTGCACGCGTTTTTGATGAACTTCACTCGCTAAATTGGTACAATTCGTCGACCAGGTGTTGATGTTGTGGTTTGTGTGAATTGCTGTATTGCAGGCGTGGTTGGATCCTGTGAACTTGCCATCGGGGAACTCGCGTTGCTGCGGCTTCTGCGGCGAGCCCCTGCAGTTCGTCCTCCAGGTGTTTGCTTTGTGGATAGTGCAGTTGTAGCTGACTACTTGTTGTTTGGGTGTGAAATCAATCACAAATAGGATTCAATTTTGTGCAGATATATGCACCGATTGAGGACAATGCGGCATCATTTCACCGCACTTTGTTCATGTTCATGTGCCCGTCAATGGCATGCTTACTCCGAGACCAGCACGACCAGTGGAAACATAGACAAGGCAATCCGTGTAGAAGGTGAATTGAAGTTCTACAGCTGTTTTGCTAATAGCCTTTTGTTGTGCTGATTTTGACTGCTGTGGGTTACAGCGTGAAGGTTTTCCGGTGCCAGCTTCCCCGTAGTAATGCCTTCTACTCAAGTGAACCACCAAAGCACAATGATTCTGACAAGCCACTATGTCCAGGAGGTAGTTTTCTTTTCTTCTTTGGATGGCAGCTTGGCATTCCTTTCCATGTTTGGTCTTTTTCTTAATGATTCTAAGTATCAAAATGATGTGTTTCCTGCATTATGTGTATGGATCATCGGTCCTCACTTATCTAGCTGTTGTATAAATATCTGATTGATAATGACTTGTGACTTGATCGAATCTTCCATGTGATAAATTCTTAAAGCTTCATCCTCATTATTTTTTCTACTGTTGCAAAAACTTTTCTCAGCATGTCAGGTACTGCCTACATTATGTTCTAAAGTTAATAAGCATTTCTTCTGTTTTTCCCAGCTTTTTTTTGGTCTAGATAATCATTCTGTTCATTTGCAGAGACCCTGTGTAAGATTTATGTGTTATGCTAGTTGCTGAATTTTCTTGTGTGACATGCTTTCATAGGCAACATTTTTCTTTTTCAGCCTTGTTAAACTGTTTTAACTTTTATTAATAGGTGGCCATTTTTCATGGTTGAACTCTTTGTTTTAATTGATAGTCAAATAATATAGATTTCTTTCAATTATTCAACTATGCTGTCAGCTCCTGTCTGCCATTGGTGCGGTACATGGAAAGGTGATAAAATCTGTAGTAGCTGCAAGAAAGCACGCTACTGCTCTGAGAAGCATCAGGTATTTATACGTCATTTTCCCGCTAATCGTTAATCTATATATGCCCTAAAGCATGCTTTGTTGAACTATTTTTTTTTTCTATTTGTCAGACACTGCACTGGCGCTCTGGCCATAAGAGTGATTGCCTACAGTTAATCAGTTCTTCTGAAGCTTCAAGCTCTATTTTTCCTGCTGTAGGAAAAGGTGATTGTATTTGAGTGCTTGATAAGCTTGTAAACATTGAATCATATCTCTTTTTTATAGTTTCATCTCTTTGCAGTTCCTGCTAGCAAATCTTGGCCAGAATATGAGATTGCAATCGACTATGAGGGTGCTTTCGATTCTGACAGTTGTGATGAGAGTAACTCGAAGTCCTTGGTGATGCAAAGACCTGGTAAACCAGATGATATGATGCAGTCATGGATGGATCAATTTGAGGTTTTAACCCTACATCCTCTCTCTCTCTCTTTTCTTTTCTTTTCTTTTTTTTGCTTATCTGTTCATCTTTGTTTTTGTTAACCACTATTATTTTTGTAGGCTGATGCTGACAACAAATGCTGGGCGTCTTTTCAAGAGCGGGTCTCAAGAGCACCAAAGCAAGTATTGAGGTGAGATTGCATCAGTTGCTTGGATTCTTTTTTATATTTGGTGGTATACTGATCAGCCTTTGCCTGGTCAGAATAGTAGCATTGTGTAGTTAATGTTCTAATTAGCCTTTTTTAGTGCCCTTGCATATTTTTTTCTCAAAATATTATGTTACAGGAATTTGAATAAACTTGCTTACATTATGCAGATACTGTCGAGAAGAGAATGCCAAACCTCTATGGGCGTTATCGGCTGGTTGTCCATCAAATGCCGATATCCCATCATGTAGCTACTGTAGAGGTCCACTATGCTATGAATTTCAGGTTGGTCTTTTTTTTTTCTGGGGCAAATTCCGTCACTGAAATATAGTGGGTATACACTTATATCCAGTTGCACATTGCAACACAAGTAATAAATTTGCAAACCCTACTCCCTCATGCCAAATATCTTGCCCTTATATCTTTGCTGTATGAATTATTCGCTGGGTACATACTGTGCATATTGTCAGACACCAATGCATCAATTTTAGAGTCAAGACCCAAAAGTTAATGGCTGCTAGCTCAACTGCCTGTTAACCAGTTGTGATACCAGGCCAGACTGAGCCAAGATATACCCGACGGTGGCTCTTTGTTATTACTGGCTTGTGCTGGTATCCAATAAACCATGGCTTAGTGGGAATTCATACCCTGCTCAAAATAGTACTGTAAATGAGATTATCAAATACTTCTGCAGCCTTTATGTTGAGTTTGGTATTTTCTTTCAAATCCCATCAGTTCAAATTATTTCTTCTACTTAGTCAGTGAAGACCTACCATCCCTAAGGTGTACGACAGTAAGGGGCAAACAGGCACCCACCCCCTTTTTCACACAGACATGCTTACATATCACACTAATTTGTACTGCAGATAATGCCACAGCTACTTTATTACTTTGGTGTGAAAAATGAGCCAGACTCTCTTGATTGGGCAACAATTGTTGTGTACACATGTAAAGGATCATGCGATCAAAATGTCAGCTACAAGGAGGAATTTGCATGGGTTCAGTTATACCCTACAACAACCACAAGGTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010909