BGIOSGA010975

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Revision as of 09:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010975| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010975, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA010975

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010975, complete gene.

LocusTag

OS03G0281600

Ensembl Transcript ID

BGIOSGA010975-TA

Ensembl Protein ID

BGIOSGA010975-PA

Length

5689

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10495798..10501486

Sequence Coding Region

10500062..10501486,10499749..10499815,10499524..10499648,10498869..10499138,10498379..10498756
,10497383..10497492,10497052..10497280,10495798..10496373

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10495798..10501486 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10495798..10501486 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGGGCGGGCAGGAGGAGGGCAAGCGGCGGGACGGATCCGACGCATCCGGGTCGGAGCCGGCCGCCGCGGCCTTCCCGGCGTGGGCGCGCACGCCAAGCGAGTGCCTCGCGGAGCTGGGCGTCGCGGCGGACCGCGGGCTGTCCTCCGAGGAGGCGGCGGCGCGGCTGCGGCGGTACGGGCCCAACGAGCTGGAGCGGCACGCGGCGCCGTCGGTGTGGAAGCTGGTGCTCGAGCAGTTCGACGACACGCTCGTGCGCATCCTCCTCGCCGCCGCCGTGGTGTCGTTCGTGCTCGCGCTCTACGACGGTGCGGAGGGCGGCGAGGTCGGGGCGACCGCCTTCGTGGAGCCCCTCGTCATCTTCCTCATCCTGATAGTGAACGCCGTCGTCGGGGTCTGGCAGGAGAGCAACGCCGAGAAGGCGCTCGAGGCGCTGAAGGAGATCCAGTCCGAGCACGCAACCGTCAAGCGCGACGGCCGGTGGTCCCATGGGCTTCCGGCGCGCGACCTCGTCCCCGGAGACATCGTGGAGCTCCGTGTTGGCGACAAGGTCCCGGCAGACATGCGTGTGCTCCAGCTTATCAGCTCCACCCTCCGTGTCGAGCAGGGTTCCCTCACTGGTGAGACTGCTTCGGTTAACAAGACCAGCCATAAAATCGAGCTGGAGGACACAGACATCCAGGGAAAGGAGTGTATGGTTTTTGCTGGCACTACAATTGTCAACGGCAGCGCTGTCTGTGTTGTGACGGGCACTGGAATGGACACTGAAATAGGCAAGATCCATGCCCAGATCCAGGAAGCCTCACAAGAGGAAGATGACACGCCACTGAAAAAGAAGCTCAATGAGTTTGGGGAGGCACTGACAGCCATAATTGGGGTGATCTGTGCCTTGGTTTGGCTTATCAACGTTAAGTATTTCCTCACCTGGGAGTATGTGGATGGGTGGCCCAGGAATTTTAAGTTCTCATTTGAGAAGTGCACATATTACTTTGAGATTGCAGTGGCACTGGCTGTTGCAGCAATTCCAGAGGGCCTGCCTGCTGTTATCACCACATGCTTGGCGCTCGGCACCAGGAAGATGGCACAAAAGAATGCACTTGTGAGGAAGTTGCCAAGTGTTGAGACACTGGGTTGCACTACAGTGATTTGCTCCGATAAGACAGGAACATTGACCACCAACCAGATGTCAGCGGTGAAGCTTGTGGCAATTGGGAGGTGGCCTGATACACTTAGGAGCTTTAAGGTTGATGGAACCACTTATGATCCAAGTGACGGGAAGATAAACGAGTGGCCAAGTTTGAGCATGGATGAAAATCTCCAGATGATTGCTAAGATTGCTGCAGTTTGCAATGATGCAAGTATTGCTCACTCTGAGCATCAGTATGTTGCCACTGGGATGCCCACAGAGGCTGCTTTGAAGGTTTTGGTTGAGAAAATGGGCCTTCCTGGTGGATATACTCCATCCCTGGATTCATCTGATTTGCTAAGGTGCTGTCAATGGTGGAACAATGCTGCTAAGAGAGTAGCTACTCTGGAGTTCGATCGGACTAGAAAATCAATGGGAGTTATTGTAAAAAAAGCAGACTCTGGAAAGAATTTGCTGCTTGTCAAGGGAGCTGTAGAAAATTTGCTAGAAAGGAGTGGCTATATTCAGTTGCTTGATGGATCTGTTGTGCTCCTGGATGAAGGTGCCAAGGCGCTCATATTATCAACACTTCGTGAAATGTCTGCTAGTGCATTGCGATGTTTGGGTTTTGCGTACAAGGAGGATTTGGCGGAATTTGCAACATATGATGGTGAAGAGCATGCAGCTCACAAATATCTACTTGATCCTTCATACTACTCTTCCATAGAGAGTAATTTGATATTCTGTGGTTTGTTGGATCCTCCCCGAGAAGAAGTCCACAAAGCAATTGAAGACTGTAGAGCTGCTGGAATACGTGTTATGGTGATTACTGGTGATAACAAAGAAACAGCAGAGGCGATATGCCGTGAGATTGGAGTTTTTGGTTCCACGGAAGATATTAGTTCAAAGAGCTTCACAGGGAAGGAATTCATGTCTCTTTCAGATAAGAAGAAACTCTTAAGGCAAACAGGTGGCCTTCTCTTCTCTAGGGCTGAGCCGAAACATAAGCAGGAGATAGTTAGATTGCTCAAAGAAGATGGTGAAGTGGTTGCTATGACTGGTGATGGAGTGAATGATGCACCAGCTCTGAAGTTGGCTGACATTGGAGTTGCTATGGGCATTACAGGGACTGAGGTTGCAAAAGAAGCTTCAGATATGGTTCTTGCAGATGATAACTTCAGTACAATAGTCGCAGCTGTTGGTGAAGGGAGGTCAATCTACGACAATATGAAGGCATTTATAAGATATATGATCTCTTCAAACATCGGGGAAGTTGCTTCCATATTTCTAACGTCAGCTTTAGGTATTCCTGAAGGTCTCATCCCTGTGCAACTTCTGTGGGTCAATCTTGTTACAGATGGTCCTCCTGCAACGGCTTTGGGGTTCAACCCACCTGATAAAGATATCATGAAGAAACCTCCACGAAGGAGTGATGACTCGTTGATCACTCCATGGATCCTATTCCGTTATATGGTCATTGGGATGTACGTTGGGATTGCCACAGTGGGAGTGTTTATCATTTGGTACACACATGGCTCTTTCCTGGGAATTGACCTGGCTGGTGATGGTCACTCTCTTGTCTCGTACTCCCAGCTCTCAAACTGGGGCCAGTGCTCCTCATGGGAGGGTTTCAAGGTGTCACCATTCACAGCAGGTGCCCGTACATTCAACTTCGATGTGAACCCATGTGATTACTTCCAGGGCGGCAAAATTAAAGCGACAACCCTCTCCCTGTCTGTCTTGGTGGCCATTGAGATGTTCAACTCGCTGAATGCGCTGTCGGAGGATGGTAGCCTTCTGAGCATGCCTCCGTGGGTTAACCCTTGGCTTCTTCTGGCAATGTCGGTTTCATTCGGGCTGCATTTCTTGATCCTCTACGTGCCATTCCTTGCCCAAGTCTTTGGTATTGTGCCCCTAAGCTTCAATGAATGGCTTTTGGTGATAGCAGTTGCTTTCCCAGTGGTTCTCATCGACGAGGTCCTTAAATTTGTGGGGCGGTGCTTGACAGCCCGTGCCAGAAAACAATCAGGAAAGCGGAAGGAAGATTAG</cdnaseq>

Protein Sequence

<aaseq>MGKGGQEEGKRRDGSDASGSEPAAAAFPAWARTPSECLAELGVAADRGLSSEEAAARLRRYGPNELERHAAPSVWKLVLEQFDDTLVRILLAAAVVSFVLALYDGAEGGEVGATAFVEPLVIFLILIVNAVVGVWQESNAEKALEALKEIQSEHATVKRDGRWSHGLPARDLVPGDIVELRVGDKVPADMRVLQLISSTLRVEQGSLTGETASVNKTSHKIELEDTDIQGKECMVFAGTTIVNGSAVCVVTGTGMDTEIGKIHAQIQEASQEEDDTPLKKKLNEFGEALTAIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSAVKLVAIGRWPDTLRSFKVDGTTYDPSDGKINEWPSLSMDENLQMIAKIAAVCNDASIAHSEHQYVATGMPTEAALKVLVEKMGLPGGYTPSLDSSDLLRCCQWWNNAAKRVATLEFDRTRKSMGVIVKKADSGKNLLLVKGAVENLLERSGYIQLLDGSVVLLDEGAKALILSTLREMSASALRCLGFAYKEDLAEFATYDGEEHAAHKYLLDPSYYSSIESNLIFCGLLDPPREEVHKAIEDCRAAGIRVMVITGDNKETAEAICREIGVFGSTEDISSKSFTGKEFMSLSDKKKLLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYMVIGMYVGIATVGVFIIWYTHGSFLGIDLAGDGHSLVSYSQLSNWGQCSSWEGFKVSPFTAGARTFNFDVNPCDYFQGGKIKATTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVIAVAFPVVLIDEVLKFVGRCLTARARKQSGKRKED</aaseq>

Gene Sequence

<dnaseqindica>1..1425#1672..1738#1839..1963#2349..2618#2731..3108#3995..4104#4207..4435#5114..5689#ATGGGCAAGGGCGGGCAGGAGGAGGGCAAGCGGCGGGACGGATCCGACGCATCCGGGTCGGAGCCGGCCGCCGCGGCCTTCCCGGCGTGGGCGCGCACGCCAAGCGAGTGCCTCGCGGAGCTGGGCGTCGCGGCGGACCGCGGGCTGTCCTCCGAGGAGGCGGCGGCGCGGCTGCGGCGGTACGGGCCCAACGAGCTGGAGCGGCACGCGGCGCCGTCGGTGTGGAAGCTGGTGCTCGAGCAGTTCGACGACACGCTCGTGCGCATCCTCCTCGCCGCCGCCGTGGTGTCGTTCGTGCTCGCGCTCTACGACGGTGCGGAGGGCGGCGAGGTCGGGGCGACCGCCTTCGTGGAGCCCCTCGTCATCTTCCTCATCCTGATAGTGAACGCCGTCGTCGGGGTCTGGCAGGAGAGCAACGCCGAGAAGGCGCTCGAGGCGCTGAAGGAGATCCAGTCCGAGCACGCAACCGTCAAGCGCGACGGCCGGTGGTCCCATGGGCTTCCGGCGCGCGACCTCGTCCCCGGAGACATCGTGGAGCTCCGTGTTGGCGACAAGGTCCCGGCAGACATGCGTGTGCTCCAGCTTATCAGCTCCACCCTCCGTGTCGAGCAGGGTTCCCTCACTGGTGAGACTGCTTCGGTTAACAAGACCAGCCATAAAATCGAGCTGGAGGACACAGACATCCAGGGAAAGGAGTGTATGGTTTTTGCTGGCACTACAATTGTCAACGGCAGCGCTGTCTGTGTTGTGACGGGCACTGGAATGGACACTGAAATAGGCAAGATCCATGCCCAGATCCAGGAAGCCTCACAAGAGGAAGATGACACGCCACTGAAAAAGAAGCTCAATGAGTTTGGGGAGGCACTGACAGCCATAATTGGGGTGATCTGTGCCTTGGTTTGGCTTATCAACGTTAAGTATTTCCTCACCTGGGAGTATGTGGATGGGTGGCCCAGGAATTTTAAGTTCTCATTTGAGAAGTGCACATATTACTTTGAGATTGCAGTGGCACTGGCTGTTGCAGCAATTCCAGAGGGCCTGCCTGCTGTTATCACCACATGCTTGGCGCTCGGCACCAGGAAGATGGCACAAAAGAATGCACTTGTGAGGAAGTTGCCAAGTGTTGAGACACTGGGTTGCACTACAGTGATTTGCTCCGATAAGACAGGAACATTGACCACCAACCAGATGTCAGCGGTGAAGCTTGTGGCAATTGGGAGGTGGCCTGATACACTTAGGAGCTTTAAGGTTGATGGAACCACTTATGATCCAAGTGACGGGAAGATAAACGAGTGGCCAAGTTTGAGCATGGATGAAAATCTCCAGATGATTGCTAAGATTGCTGCAGTTTGCAATGATGCAAGTATTGCTCACTCTGAGCATCAGTATGTTGCCACTGGGATGCCCACAGAGGCTGCTTTGAAGGTATGGCTCATTAGTGCAATAAAATATGTTCTCTATGTTGCTTCACCTAATGATCATGTAATATCTGGAAAGTGTTAACGGTGATGTTTTGCATAACATAGAACATAGATAAACACATGGGAATTACTTCTAATCATCCATGTAACTTATTTTGAAGTTCATATGTGTAGAATCCGTGCCTTTTCAAGTTGCTTACAATTATTTGATTATTTCTATTGTTGAATGATTGTGTTATGTATGTGGCAGGTTTTGGTTGAGAAAATGGGCCTTCCTGGTGGATATACTCCATCCCTGGATTCATCTGATTTGCTAAGTATGCTGATTTCTGTGATTTGTAAAATAGAATCTGTGAGCATTATTTGCATTCTTTTTGAATAATCCTAGACTAACTTGCACTTTTCTATTGTTTTAAGGGTGCTGTCAATGGTGGAACAATGCTGCTAAGAGAGTAGCTACTCTGGAGTTCGATCGGACTAGAAAATCAATGGGAGTTATTGTAAAAAAAGCAGACTCTGGAAAGAATTTGCTGCTTGTCAAGGTATTCTGAACCATTTATAATTCCATTGTAGAATTATCGAATGTTTCTCTATCATAAATGACCTAGTGGACAACCATACGCAGCTTACTCCTATTTAATTCTTCATAATACTGGAAGCAACATAGTTGTGGATTGTTATATTCCAACTGCAGCGCATCCTTTTGTCCTTTCTCTCCTGGAATAGGCTATAGGCCTTGTCTTATTGTCAGTTGTCTTTGCCAATAGTATCAATGGCTGTTTTCCACTTTTGTTCCTTTAGTTAGCTTGGTTGCCTTACTTGGTAACGAATTCTCTGTGCTTCTGAATTGGCATGTGTTATGTTCTTTTATCCATTGCATTTTCTTTTACCTGTTAATGTATTCATGTTAAGATTGGACTCTTGCAGGGAGCTGTAGAAAATTTGCTAGAAAGGAGTGGCTATATTCAGTTGCTTGATGGATCTGTTGTGCTCCTGGATGAAGGTGCCAAGGCGCTCATATTATCAACACTTCGTGAAATGTCTGCTAGTGCATTGCGATGTTTGGGTTTTGCGTACAAGGAGGATTTGGCGGAATTTGCAACATATGATGGTGAAGAGCATGCAGCTCACAAATATCTACTTGATCCTTCATACTACTCTTCCATAGAGAGTAATTTGATATTCTGTGGTTTGTTGGTCTAAGGGTGAGAACATGTTCTTCATAGAAATTCTCCAACTGTGACTATTCAATAACTATATGATTTCTGCATTTCGAATCTGTGCAACTTTTAACAATACACTATGACAGGATCCTCCCCGAGAAGAAGTCCACAAAGCAATTGAAGACTGTAGAGCTGCTGGAATACGTGTTATGGTGATTACTGGTGATAACAAAGAAACAGCAGAGGCGATATGCCGTGAGATTGGAGTTTTTGGTTCCACGGAAGATATTAGTTCAAAGAGCTTCACAGGGAAGGAATTCATGTCTCTTTCAGATAAGAAGAAACTCTTAAGGCAAACAGGTGGCCTTCTCTTCTCTAGGGCTGAGCCGAAACATAAGCAGGAGATAGTTAGATTGCTCAAAGAAGATGGTGAAGTGGTTGCTATGACTGGTGATGGAGTGAATGATGCACCAGCTCTGAAGTTGGCTGACATTGGAGTTGCTATGGGCATTACAGGGACTGAGGTCTGCTTCTTGCTTTGTTATTAAACTGTTCCTTTTCTTTTATCTTTTATGAGGGTAATTTTGCAATTTATATTTTTCATCTCCTTTTTACTTGTCACCTATCATACATTCTGAGTGGTAGAGCACATTAGGCTTCACTATTCTCATGTGATGTAACCATTCTTAGGCTTCTGATCACATTTTTTATAGTTTAGCTGTGCTCTTTCCGTTACTATTTCTTGCTGCCATCTCATTCATTTTTTGCTTCATCACTAGCCTGTTACTAACTTTACCCATTGGTCGTTGTTGGTCGCTTCCCTGCTGAGCATTTCATAAGAACTGCTTAAGATCACACGATAATTCTTAGATAGTGAACTATAAATTGGATTTTCTATTTCCTTTTAATTTTGTCTCCTTATTTTTTTTATGCTTCAGAATTTACCAAAAGAATCCATCGCATGGTGTTTTTGTATCTCTTTCTATGTTTTATCCGTTCCCTTTTTGTATGATTGTATACTCCCTCTGTCCCAATATAAGTGCAACCTAAGATAGATGTGACATATCCTAGGACTACAAATCTGGAGGTTGCACTTATATTGGGATGGAGGGAGTATGTTTTATAATGGTCCTGGAGTTTTTACCACAGAATGCAGGGTATTTATGGTGTACATAAAGATCATGTACTGCGTGAACTATAAAAATGACACAAGCATATGGGCTTGTGACAGACCAAAATTTAGAAGAAAGAATTCTGCACAATCAGTTTCCTTGTCTTTCTGTCCAGAATCTTATCACACATGCATATTTCAGTCCTGAAAGCATGTGGTTGGTGCTGTACTTATTCTCAGTAAATGTAATAAACCAGAATCCTGACCTCGTTTTTTTCCTTATGTATAATTTTTGTTAGGTTGCAAAAGAAGCTTCAGATATGGTTCTTGCAGATGATAACTTCAGTACAATAGTCGCAGCTGTTGGTGAAGGGAGGTCAATCTACGACAATATGAAGGCATTTATAAGGTACATCATTATGCCAGCTATGGCTAACCCTTTCTTGCTTTGTTAGCATCTGACAAGTCAATAAAAATGCTGTCAGTTAATGTGGGCTATATGTTATTGCAGATATATGATCTCTTCAAACATCGGGGAAGTTGCTTCCATATTTCTAACGTCAGCTTTAGGTATTCCTGAAGGTCTCATCCCTGTGCAACTTCTGTGGGTCAATCTTGTTACAGATGGTCCTCCTGCAACGGCTTTGGGGTTCAACCCACCTGATAAAGATATCATGAAGAAACCTCCACGAAGGAGTGATGACTCGTTGATCACTCCATGGATCCTATTCCGTTATATGGTATGTTTTCCTCTCCTTTTATGTCTATTTGAGATGAGAATGTTTTCTGATCATGCATATTTACTTATCTATCCTTTTTTAAAGTCAATTAATATTGTGTTATTATGCTGAATACTTTTATTGTTTATCGTGTTCACGTGCATGAACAATTTATACATTTTGAGCAATTTTACAATAACCTACTTAAGTTCTTATGTGGTTTCATATTTAGAAATTTCATGATTACATACTTCTATTTATATCACTGTAGAAACGCTAAGGTACACCAATCCAACAAAAATGAGTATGACTTATGAGCATCATCAAACATAATGGATGCTCTCCCTTTTTCTAGCATAGGATGTGTTAGATGAGGCCTGTTGAGTTGTTGGGGGTTGATTTATATATGTTTATTTATTGGGAGTTACTTTATATGCTCACCTCTAAGAAAATTAACACGTCTCAGTGATCTAGTGATCTATTTGACTACTAAAGAAAGAGGAACACGCCTCAGTTCTGGTTAGCAAAAAGAAGTGAAGTGTGTAAGCATCATGGTTAACGAATAACTGTTAAAAGTCTTGTGGTTATTTTTTATGAACCCAAATAAGTCCTAATTCATGATAGTACACTGTCTGGACTCTGGACCTATCCATATTCCTAACTCATTCTACTTACTTGGAATCCATGTCCATCCTACAGGTCATTGGGATGTACGTTGGGATTGCCACAGTGGGAGTGTTTATCATTTGGTACACACATGGCTCTTTCCTGGGAATTGACCTGGCTGGTGATGGTCACTCTCTTGTCTCGTACTCCCAGCTCTCAAACTGGGGCCAGTGCTCCTCATGGGAGGGTTTCAAGGTGTCACCATTCACAGCAGGTGCCCGTACATTCAACTTCGATGTGAACCCATGTGATTACTTCCAGGGCGGCAAAATTAAAGCGACAACCCTCTCCCTGTCTGTCTTGGTGGCCATTGAGATGTTCAACTCGCTGAATGCGCTGTCGGAGGATGGTAGCCTTCTGAGCATGCCTCCGTGGGTTAACCCTTGGCTTCTTCTGGCAATGTCGGTTTCATTCGGGCTGCATTTCTTGATCCTCTACGTGCCATTCCTTGCCCAAGTCTTTGGTATTGTGCCCCTAAGCTTCAATGAATGGCTTTTGGTGATAGCAGTTGCTTTCCCAGTGGTTCTCATCGACGAGGTCCTTAAATTTGTGGGGCGGTGCTTGACAGCCCGTGCCAGAAAACAATCAGGAAAGCGGAAGGAAGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010975