BGIOSGA010977

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Revision as of 09:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010977| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010977, complete gene.| tag = OsI_110...")
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Gene Name

BGIOSGA010977

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010977, complete gene.

LocusTag

OsI_11035

Ensembl Transcript ID

BGIOSGA010977-TA

Ensembl Protein ID

BGIOSGA010977-PA

Length

3344

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10483656..10486999

Sequence Coding Region

10486937..10486999,10485731..10486000,10485241..10485618,10484246..10484355,10483915..10484143
,10483656..10483664

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10483656..10486999 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10483656..10486999 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCATGAGTGCCAAGTCGGCTAGAGCTAGGATGCTTGATCCTGATGACATTGTGGTCATGGGAGCTGTAGAAAATTTGCTAGAAAGGAGTGGCTATATTCAGTTGCTTGATGGATCTGTTGTGCTCCTGGATGAAGGTGCCAAGGCGCTCATATTATCAACACTTCGTGAAATGTCTGCTAGTGCATTGCGATGTTTGGGTTTTGCGTACAAGGAGGATTTGGCGGAATTTGCAACATATGATGGTGAAGAGCATGCAGCTCACAAATATCTACTTGATCCTTCATACTACTCTTCCATAGAGAGTAATTTGATATTCTGTGGTTTGTTGGATCCTCCCCGAGAAGAAGTCCACAAAGCAATTGAAGACTGTAGAGCTGCTGGAATACGTGTTATGGTGATTACTGGTGATAACAAAGAAACAGCAGAGGCGATATGCCGTGAGATTGGAGTTTTTGGTTCCACGGAAGATATTAGTTCAAAGAGCTTCACAGGGAAGGAATTCATGTCTCTTTCAGATAAGAAGAAACTCTTAAGGCAAACAGGTGGCCTTCTCTTCTCTAGGGCTGAGCCGAAACATAAGCAGGAGATAGTTAGATTGCTCAAAGAAGATGGTGAAGTGGTTGCTATGACTGGGGATGGAGTGAATGATGCACCAGCTCTGAAGTTGGCTGACATTGGAGTTGCTATGGGCATTACAGGGACTGAGGTTGCAAAAGAAGCTTCAGATATGGTTCTTGCAGATGATAACTTCAGTACAATAGTCGCAGCTGTTGGTGAAGGGAGGTCAATCTACGACAATATGAAGGCATTTATAAGATATATGATCTCTTCAAACATCGGGGAAGTTGCTTCCATATTTCTAACGTCAGCTTTAGGTATTCCTGAAGGTCTCATCCCTGTGCAACTTCTGTGGGTCAATCTTGTTACAGATGGTCCTCCTGCAACGGCTTTGGGGTTCAACCCACCTGATAAAGATATCATGAAGAAACCTCCACGAAGGAGTGATGACTCGTTGATCACTCCATGGATCCTATTCCGTTATATGAAACGCTAA</cdnaseq>

Protein Sequence

<aaseq>MGMSAKSARARMLDPDDIVVMGAVENLLERSGYIQLLDGSVVLLDEGAKALILSTLREMSASALRCLGFAYKEDLAEFATYDGEEHAAHKYLLDPSYYSSIESNLIFCGLLDPPREEVHKAIEDCRAAGIRVMVITGDNKETAEAICREIGVFGSTEDISSKSFTGKEFMSLSDKKKLLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYMKR</aaseq>

Gene Sequence

<dnaseqindica>1..63#1000..1269#1382..1759#2645..2754#2857..3085#3336..3344#ATGGGCATGAGTGCCAAGTCGGCTAGAGCTAGGATGCTTGATCCTGATGACATTGTGGTCATGGTCTATTTTTGAAATAAATAAAAATAAGTTTTGCCATAATATTTTTGAAATAAATTTTCCAAAAAGTTAAATTGTAAAAAATTCGACGTCCTGGTTCTGGCGGCCTGTGCCTGCAAATTTGACAAATTTTGCAGAAGGAAATGCAATGTCGCGCTTGCAAAGGAAGACCTTCATTCTCTCCAATTGGACCGGGTCGTAGGAATGTAAAGCCCCTCTTCTGGCTGTGGGCCATAATTCTGCCTCCTGACAAAGGATCGAGTTATGGGCAAGCAACCCTTCCCCTCACGAATCACTATGGGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATAGAATCTGTGAGCATATTTGCATCTTTTTGAATAATCCTAGACTAACTTGCACTTTTCTATTGTTTTAAGGGTGCTGTCAATGGTGGAACAATGCTGCTAAGAGAGTAGCTACTCTGGAGTTCGATCGGACTAGAAAATCAATGGGAGTTATTGTAAAAAAAGCAGACTCTGGAAAGAATTTGCTGCTTGTCAAGGTATTCTGAACCATTTATAATTCCATTGTAGAATTATCGAATGTTTCTCTATCATAAATGACCTAGTGGACAACCATACGCAGCTTACTCCTATTTAATTCTTCATAATACTGGAAGCAACATAGTTGTGGATTGTTATATTCCAACTGCAGCGCATCCTTTTGTCCTTTCTCTCCTGGAATAGGCTATAGGCCTTGTCTTATTGTCAGTTGTCTTTGCCAATAGTATCAATGGCTGTTTTCCACTTTTGTTCCTTTAGTTAGCTTGGTTGCCTTACTTGGTAACGAATTCTCTGTGCTTCTGAATTGGCATGTGTTATGTTCTTTTATCCATTGCATTTTCTTTTACCTGTTAATGTATTCATGTTAAGATTGGACTCTTGCAGGGAGCTGTAGAAAATTTGCTAGAAAGGAGTGGCTATATTCAGTTGCTTGATGGATCTGTTGTGCTCCTGGATGAAGGTGCCAAGGCGCTCATATTATCAACACTTCGTGAAATGTCTGCTAGTGCATTGCGATGTTTGGGTTTTGCGTACAAGGAGGATTTGGCGGAATTTGCAACATATGATGGTGAAGAGCATGCAGCTCACAAATATCTACTTGATCCTTCATACTACTCTTCCATAGAGAGTAATTTGATATTCTGTGGTTTGTTGGTCTAAGGGTGAGAACATGTTCTTCATAGAAATTCTCCAACTGTGACTATTCAATAACTATATGATTTCTGCATTTCGAATCTGTGCAACTTTTAACAATACACTATGACAGGATCCTCCCCGAGAAGAAGTCCACAAAGCAATTGAAGACTGTAGAGCTGCTGGAATACGTGTTATGGTGATTACTGGTGATAACAAAGAAACAGCAGAGGCGATATGCCGTGAGATTGGAGTTTTTGGTTCCACGGAAGATATTAGTTCAAAGAGCTTCACAGGGAAGGAATTCATGTCTCTTTCAGATAAGAAGAAACTCTTAAGGCAAACAGGTGGCCTTCTCTTCTCTAGGGCTGAGCCGAAACATAAGCAGGAGATAGTTAGATTGCTCAAAGAAGATGGTGAAGTGGTTGCTATGACTGGGGATGGAGTGAATGATGCACCAGCTCTGAAGTTGGCTGACATTGGAGTTGCTATGGGCATTACAGGGACTGAGGTCTGCTTCTTGCTTTGTTATTAAACTGTTCCTTTTCTTTTATCTTTTATGAGGGTAATTTTGCAATTTATATTTTTCATCTCCTTTTTACTTGTCACCTATCATACATTCTGAGTGGTAGAGCACATTAGGCTTCACTATTCTCATGTGATGTAACCATTCTTAGGCTTCTGATCACATTTTTTATAGTTTAGCTGTGCTCTTTCCGTTACTATTTCTTGCTGCCATCTCATTCATTTTTTGCTTCATCACTAGCCTGTTACTAACTTTACCCATGGGTCGTGTTGGTCGCTTCCCTGCTGAGCATTTCATAAGAACTGCTTAAGATCACACGATAATTCTTAGATAGTGAACTATAAATTGGATTTTCTATTTCCTTTTAATTTTGTCTCCTTATTTTTTTTATGCTTCAGAATTTACCAAAAGAATCCATCGCATGGTGTTTTTGTATCTCTTTCTATGTTTTATCCGTTCCCTTTTTGTATGATTGTATACTCCCTCTGTCCCAATATAAGTGCAACCTAAGATAGATGTGACATATCCTAGGACTACAAATCTGGAGGTTGCACTTATATTGGGATGGAGGGAGTATGTTTTATAATGGTCCTGGAGTTTTTACCACAGAATGCAGGGTATTTATGGTGTACATAAAGATCATGTACTGCGTGAACTATAAAAATGACACAAGCATATGGGCTTGTGACAGACCAAAATTTAGAAGAAAGAATTCTGCACAATCTGTTTCCTTGTCTTTCTGTCCAGAATCTTATCACACATGCATATTTCAGTCCTGAAAGCATGTGGTTGGTGCTGTACTTATTCTCAGTAAATGTAATAAACCAGAATCCTGACCTCGTTTTTTTCCTTATGTATAATTTTTGTTAGGTTGCAAAAGAAGCTTCAGATATGGTTCTTGCAGATGATAACTTCAGTACAATAGTCGCAGCTGTTGGTGAAGGGAGGTCAATCTACGACAATATGAAGGCATTTATAAGGTACATCATTACGCCAGCTATGGCTAACCCTTTCTTGCTTTGTTAGCATCTGACAAGTCAATAAAAATGCTGTCAGTTAATGTGGGCTATATGTTATTGCAGATATATGATCTCTTCAAACATCGGGGAAGTTGCTTCCATATTTCTAACGTCAGCTTTAGGTATTCCTGAAGGTCTCATCCCTGTGCAACTTCTGTGGGTCAATCTTGTTACAGATGGTCCTCCTGCAACGGCTTTGGGGTTCAACCCACCTGATAAAGATATCATGAAGAAACCTCCACGAAGGAGTGATGACTCGTTGATCACTCCATGGATCCTATTCCGTTATATGGTATGTTTTCCTCTCCTTTTATGTCTATTTGAGATGAGAATGTTTTCTGATCATGCATATTTACTTATCTATCCTTTTTTAAAGTCAATTAATATTGTGTTATTATGCTGAATACTTTTATTGTTTATTGTGTTCACGTGCATGAACAATTTATACATTTTGAGCAATTTTACAATAACCTACTTAAGTTCTTATGTGGTTTCATATTTAGAAATTTCATGATTACATACTTCTATTTATATCACTGTAGAAACGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010977