BGIOSGA010985

From RiceWiki
Revision as of 09:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010985| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010985, complete gene.| tag = OsI_110...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA010985

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010985, complete gene.

LocusTag

OsI_11013

Ensembl Transcript ID

BGIOSGA010985-TA

Ensembl Protein ID

BGIOSGA010985-PA

Length

4712

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10286401..10291112

Sequence Coding Region

10290684..10291112,10289488..10289607,10289367..10289404,10289110..10289174,10288727..10288795
,10287840..10287973,10286608..10286748,10286401..10286499

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10286401..10291112 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10286401..10291112 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTCGACGCCGCCGCGCCGTCGAGCGGCGGCGGCGGCGAGGACGAGGCCGTGCGGCCGCTGCTCCCCGCGGAGGCGGAGGAGGAGCTGGACGCGACGTACGCGCCCTACGCGCGGCGGGACGCATACGGGACGATGGGACGCGGGCCGCTCCGGGCCGCGCGGCGGGTGGAGTTGTACCTCAGGGCGGCCCTCCTCGTCCCGCTCCGGTTCGTCGCCGGGATGCTCCTGCTCGTCGCCTACTACCTCGTGTGCCGCGTGTGCACGCTGTTCGTGGACGAGGTGGCGGAGGAGGGGCGGCCGCGGCTGCGCGGGTGGAGGAGGGTGGCCGTGGTGCGGGCGGGGCAGGGGCTCTCGCGGGCAATGCTCTTCGTCTTCGGGTTCTACTGGATCCGCGAGACCCACCGGAGCTACCCCAATGCTGAGGATGTACATCAAGGTCAATCTGAAGAATTGGAATTACCAGGGGCAATTGTGTCTAATCACGTGTCTTATGTAGATATTCTTTATCACATGTCAGTTTCTTTTCCAAGCTTTGTTGCAAAGGAGTCAGTGTCCAGGTTGCCCCTAGTTGGTCTCATAAGCAAATGTCTTGGATGCATTTTCGTTCAACGAGAGTCCAAAGCTTCAGATTCTAAAGGTGTCTCAGGTGCTGTAACTGAAAGGGTCCAAGAGGCTTATCAAGATAAGAATTCCTCAATGATGTTGCTATTTCCTGAGGGTACTACTACGAATGGGGATTACCTTCTGCCATTTAGGACAGGAGCCTTTCTTGCAAGAGTTCCAGTTCAGCCAGTCATTTTGAGATATCCGTACACGATGTTTAGTCCAGCCTGGGACTCCATGGATGGGGCACGCCATGTCTTTTTGCTCCTCTGTCAATTTGTAAATTACATAGAAGTTGTTCGTTTGCCTGTATACTGCCCATCTGAGCAAGAAAAGGAAGATCCCAAGCTCTATGCCAACAATGTTAGAAAACTGATTGCAACAGAGGGCAATTTAATTTTTTCTAATCTCGGTTTGGCAGAGAAGCGTGTATATCATGCTGCACTGAATGGTAATAGTCGTGCTATACATCAGAAAGATGATTGA</cdnaseq>

Protein Sequence

<aaseq>MALDAAAPSSGGGGEDEAVRPLLPAEAEEELDATYAPYARRDAYGTMGRGPLRAARRVELYLRAALLVPLRFVAGMLLLVAYYLVCRVCTLFVDEVAEEGRPRLRGWRRVAVVRAGQGLSRAMLFVFGFYWIRETHRSYPNAEDVHQGQSEELELPGAIVSNHVSYVDILYHMSVSFPSFVAKESVSRLPLVGLISKCLGCIFVQRESKASDSKGVSGAVTERVQEAYQDKNSSMMLLFPEGTTTNGDYLLPFRTGAFLARVPVQPVILRYPYTMFSPAWDSMDGARHVFLLLCQFVNYIEVVRLPVYCPSEQEKEDPKLYANNVRKLIATEGNLIFSNLGLAEKRVYHAALNGNSRAIHQKDD</aaseq>

Gene Sequence

<dnaseqindica>1..429#1506..1625#1709..1746#1939..2003#2318..2386#3140..3273#4365..4505#4614..4712#ATGGCTCTCGACGCCGCCGCGCCGTCGAGCGGCGGCGGCGGCGAGGACGAGGCCGTGCGGCCGCTGCTCCCCGCGGAGGCGGAGGAGGAGCTGGACGCGACGTACGCGCCCTACGCGCGGCGGGACGCATACGGGACGATGGGACGCGGGCCGCTCCGGGCCGCGCGGCGGGTGGAGTTGTACCTCAGGGCGGCCCTCCTCGTCCCGCTCCGGTTCGTCGCCGGGATGCTCCTGCTCGTCGCCTACTACCTCGTGTGCCGCGTGTGCACGCTGTTCGTGGACGAGGTGGCGGAGGAGGGGCGGCCGCGGCTGCGCGGGTGGAGGAGGGTGGCCGTGGTGCGGGCGGGGCAGGGGCTCTCGCGGGCAATGCTCTTCGTCTTCGGGTTCTACTGGATCCGCGAGACCCACCGGAGCTACCCCAATGCTGAGGTCAGTATCGAGACCTTCCCCACTTTCTCTGTTTCTCAGCATGTGATTTGTGTGGCCGATTTGATTCGTTTGCTCCGATATGTACTGTGGTGATGTCACATGTATACGGCGTACTGTTTGGTGGTCAATGATGATTTTGGAAAAACCCACTGATGATTTTGTGATGCCGATGTGGATGCGGGAGTCTGGGAGCACAGCTTTTTTTTTTTTTAATTTTTTTTGCTGCTGTTAGTAGGCATAATAAATCAATGACATTGCGTTAGATGGTTACTGCGTTATGAAGCTGCGACTCAGCATCTCTGAGTAGTTTGTGGCTATACCAGATCAATCATGGGGCCATGAGTAGTTTGTGACTTATCTCGGAATTTGGATTTCTTCTCCGTCGGAGCATGTAGAATTGTGGACTATGTCGACTGATAGTTGCTACCACTAGTAAATTGCAAAACAACAAGAAGAAAGTTTTATTAGCAATTCCATTTGATACATATTCATTAATGGCATGAATGTTATTTACCGTTGCAGTAATACATGAGATCATTATGACTTCAAATTGCTCAAATGCTTAAACGTGATCTTTAAATCATTTGAGAGAAACTAGGGAAGTGCCATGATTGGCATAAAGACATGAAGTGGGAATTCATTAATTTGATTTTTTTTTAAAAAAATATGATTGGCTTTGTAGAGTGTTCATTGTATAGATTGATCCATGTTACAGAGGTAATTTAAAATTATGTTTTACTTGCTTCCTGAGCTGCTACAAAACTATGGAACAAAGCTTTATTGCCAAGAGAACAATACACAATCCGACAGGCAAGTTTTCAATCCAGAACCTAACATTAATAGCTACAGTGTAGTTTGATTTTGCTTTTTTGTCGAGGGTACAGAATGCAGAATGAAGCTTCTCTTGCATGGTTTGTAAGTCTCGCTGGACAAAATTTGAGAAGGAATTGTTTTCTTTAAACTTGTTTGTATTGCTTTGTAGAAGTACTGTATGCCACTTTTCTATGTCCATGTGACTAAACTTGTACAATTTTGTTGTCTGGTGCCCCATCATGCTGTTATAATATTGTGCTCAGGATGTACATCAAGGTCAATCTGAAGAATTGGAATTACCAGGGGCAATTGTGTCTAATCACGTGTCTTATGTAGATATTCTTTATCACATGTCAGTTTCTTTTCCAAGCTTTGTTGCAAAGGTACCAAAATATACTTCTATTTGCTACTGTCCATAAGATGATTTATTTCCCTGGCCATTTTTAACTTTATACTCTTACTGTAGGAGTCAGTGTCCAGGTTGCCCCTAGTTGGTCTCATAAGGTACCTTCCCTTGCTCATTAATATTTTCTAGGCATGCCACATTCAGATCAACTAGTGTGTTCAGCTTTCCATTGATATTAAACATGTTGAGTGTTTCTCAACATTTTCCATCATACGTGCTCAGCCTTTTTCCATAAATGTTTATCTTGCATAAAATATATCTTGCTCAATCTTTTTTGCTTTATAATGCAGCAAATGTCTTGGATGCATTTTCGTTCAACGAGAGTCCAAAGCTTCAGATTCTAAAGGTGTCTCAGGTATACAATAATATGCAGTACTTGAAGTCATTATACTGATCACATTCTTGCAATTCTTGTCAAATAAATCGTTTTCAGTATTATTCAAATTTATATTTATGCTGAATGATTATTTAATACTACTGGTTCAAATATTGCAGACTTTCACCACATTACCTGACGAACACTTTCATCTGTTTCATACGCATGTTTTTAATTTTCTGTCATATGCATGCCTATCTTTGCTGGTTTCTTCACACCAATGTAATTTGCAATTTTATAACTCTTCATATAGTTTTCTCTGCTGTTTTCCTAAGTGTCTATGCCATATGTAGGTGCTGTAACTGAAAGGGTCCAAGAGGCTTATCAAGATAAGAATTCCTCAATGATGTTGCTATTTCCTGGTTTGTGTACAATCATAATCCTTTGCGGTTTCTTTTGAACTTTGTGATGGCTGGTGGAACTTAGTTCTTTTGCAGCAATTATTGATGTTTCTTATCATTGTAAGAAAAGTTATATTTATTATAAGGCACTGTCTCCCATCCATTGAATGAGTCATCTTTTACTACTACTACTACTACAAAAAAAAAATCCTGTGGCAATCAAAATAGTTATTTAAGATGATCACACTATGGTGGGCTAGGAGGGAGCACCTTAGTGTGATGGCTAAGTTGTAAATACACGAGTTCATTCACTAGGTTTTTCGAATTCTGATGCTTGATTTTTGCAACATAACTGCATTTTAGTAGAAATTTTGTGAATTTCACAAATTTATCGTTGGCCTCTATATACTGAGCATGTGTGAAGGCGCACACTTAAGTGTGGTGTGCTTGGTTGTTTGTGTGCGAGTGTTCGTTCAATGTTATAATAAAAAATGCGGCACACTGGGCTAGGAGAAAATGAGCTATTTGGAGCTACCTATTATGCTGAAATGTAATACCATTTTCCATTCCCTGTACACAAACACTTTTGATTACTTATTAAAACTACTGGTCAACCTTCATTTTGTGCTCCAGCCTTAAGCAATGTTATTTTAATTTTATGCAGCATGAATTTTTGTCTTCTTATGTCACCTTATCCTTTTCCTACTTCGGTCTACATATTTTCAAAAAAAAAAAAAAATCCTTTGCTCATTTTCTTGATTTTCAACCTTGCAGAGGGTACTACTACGAATGGGGATTACCTTCTGCCATTTAGGACAGGAGCCTTTCTTGCAAGAGTTCCAGTTCAGCCAGTCATTTTGAGATATCCGTACACGATGTTTAGTCCAGCCTGGGACTCCATGGATGGGGTAAGCTTCAGTTACATATTTGTGTTTGTTTCAAAATGACAGCATAGGAGCCAGGGCAGTACCTGAGAATTTGAGAGTCCTGTGCTAAATTAAAGTCAGGCATTGTATTTTGGAATAGCCAGTTATCAGAATAAAACAATAGATTAGAATTAGGTGTTAACTGCTAACTTATTGGTTCCCTTTTTGGTATTATCCTTTTCACAAGAAGATTAACCTATCCTGATTTGGAGGGATAGACAGGTGAGAGCAAGAACAACACTCAAATACACAAATATAAGGGAAAAAAAACAATAGTAATGTGTCTTATACATTTCAATAAAAATATAAAAAAAGTAGGGAAATTCCCATAAAGGTAATAAAAATGTTTAATTGTAACTTTTCATCTGAGAGAAGTTTTGGTTTTTTAGGACAGAAATTTAAATTACAGTTGCTGTAAATTTTCCTGAAACGTTAGACCACTGTAATTGAAGATAAAACCAAAATTTAAGGGCTCCTAACAAATGTTGGTGGCCATCAGTTTAGCACTTTGCATCTACCCCAGGTACTGCAGTATGGGCCTGATCAGGACCCAAAAGTAGACACAGGATTCCATCAGCAATTTGTTGGAACCCTATATGTTAAATCCATGCTGCCCAGAGTATCATTTTGCTCCATAATTGATATTTATATTTTCTTAGGATTTTTATGGCCTGAACCTAGCTATGACTTGCAACATGACAAAGATATTTTCATTACAAATATTATTGCCAAATTCTATTGTGTTTATGTGATCTATTGAATCTACAGGCTACTGAAGATCACTAGATTGGTGCATTCTTCCTGTAATAATAATATTTTTATCTAGTTTGGTAAATTCCAACAGACATGATATGGCACTATAAACATTGATACTTCCAGAATGTTGTGTTCATTGAGTTCACAATACAAATATGGTTAGAATTATTGATGGTTGCTATGAAACTATTTCAGAAGTTTATGGCATGTCAAACTGTACTAATAATACTATGTACAGGGTGTTCTTTTTACTGGATCCTTTTCCATTTATTTCTGAACTAACAACTAATATAACTGAACTGGAAAAAAAATTACAGGCACGCCATGTCTTTTTGCTCCTCTGTCAATTTGTAAATTACATAGAAGTTGTTCGTTTGCCTGTATACTGCCCATCTGAGCAAGAAAAGGAAGATCCCAAGCTCTATGCCAACAATGTTAGAAAACTGATTGCAACAGAGGTTTTATTCATCCCTCTTCCTAAGATCCGAGATGATTATCTACCTTTTTCGAATAAACCGTCTGGGAGTTTGAGCTAGCCTTCATATAACAACCTTCTGTTTCTGCAGGGCAATTTAATTTTTTCTAATCTCGGTTTGGCAGAGAAGCGTGTATATCATGCTGCACTGAATGGTAATAGTCGTGCTATACATCAGAAAGATGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010985