BGIOSGA010988

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Revision as of 09:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010988, complete gene.| tag = OS03G02...")
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Gene Name

BGIOSGA010988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010988, complete gene.

LocusTag

OS03G0279600

Ensembl Transcript ID

BGIOSGA010988-TA

Ensembl Protein ID

BGIOSGA010988-PA

Length

7090

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10251977..10259066

Sequence Coding Region

10258327..10259066,10255971..10256047,10255754..10255881,10253617..10253684,10253377..10253483
,10253203..10253288,10252937..10253089,10252722..10252799,10252553..10252618
,10251977..10252267

Genome Context

<gbrowseImage1> name=IndicaChromosome03:10251977..10259066 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:10251977..10259066 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGACTTCAGAAACAGCAGTTATGTAGATGGATACGCCATGATGATCTGGACATGCTAACCGATGAGCTAGAAAGGAAACGATACCGAACATTGATACTCATGGCTGACACATTTCTGGCTAACGATTTGCGTCAGTTTCCCTCTGCTAAACGTAAAGCTTCTCTTTATACGTCAACACTTGCAAACATTTTCATCTTGATGTTGAAGGTTTCTTCAGTTGCAGTGAAATGCGAAGCGTCTAATTCACCTTCCACAACTGTAGGCTTTGACAGAATGATCGCCGCGGACTATGACCTGTTCCATCACATGAGCTTCTCGCCGTCGCTTCAGAATCTTCAGTCACCAACGTTTTTCACCACGAGAAGTTCAGAGAGCTACTTGGGAGAGAGCTCGATCTATGGCGGAGGCGCCAGGCCTGCACTCGCGCAGTTCAGCTATTCCCAGCCAATTGCTGCTACTTCTGCTGCTCATTTGGTGAGATGGACGGCGGCCGGGGAGCCGATGACCGGCGACGGCGGTTTCAGGAGCTCCAAGAGGCTCAAGACAGCAACTACGGCGACGACACAACCTCCAAGGCATGGGGTGAAGTGCCATGCAAAGCCAAGAAATCAAACTACGAAGGCAACATGTAAGAAGAGGAGCCAGAAACTGGGCGACAGAATCACAGCTCTGCAGCAGTTAGTTTCACCTTACGGCAAGACAGACACCGCATCGGTGCTCCACGAAGCAGCCGCCTGCATACGGCAACTCCACCAACAAATCCAGATTCTGACAGCGCCTTACCCTGGAACAAGCTCCTCCTCTGCATCGTCGCAGCAGCAGGTCGTATTTTCTGTTCTTGAAAGTTGCAGCCATGTCATGTCCTTCTTTACTGCAATTGCAACAGTTTTGTGGCTGCAGGATGCCGGAGGAGGAGGAGGCACGGCGACGGAGCTTCGCCGGCGAGGCCTGTGCGTGGCGGCGCTGTCGCCGGCCGTCGTGAGCCTCGCGGCAGAGGGCGGTCGCCGCCGCACGGACGTCGAGGATCAGAAGAGGATCTGGTTCAGTAATCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASPPPPPPQPPSPSAATAGAAAAPVDALFLQNLMSRVQLRPPFLDTNSFLTQDLDEFLLNEFAALSAAAGASDDDDDGEDGEGEGSDGEVVSGEARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYRVWEWHGHVMIFDDEDGYSAEYIYGNHFEPLAAATARAKEKEREKREKELSSGLRDLILGDTGSGANGSKENGKGGAPRVVRRNVVNAPAAPARLQKQQLCRWIRHDDLDMLTDELERKRYRTLILMADTFLANDLRQFPSAKRKASLYTSTLANIFILMLKVSSVAVKCEASNSPSTTVGFDRMIAADYDLFHHMSFSPSLQNLQSPTFFTTRSSESYLGESSIYGGGARPALAQFSYSQPIAATSAAHLVRWTAAGEPMTGDGGFRSSKRLKTATTATTQPPRHGVKCHAKPRNQTTKATCKKRSQKLGDRITALQQLVSPYGKTDTASVLHEAAACIRQLHQQIQILTAPYPGTSSSSASSQQQVVFSVLESCSHVMSFFTAIATVLWLQDAGGGGGTATELRRRGLCVAALSPAVVSLAAEGGRRRTDVEDQKRIWFSNQ</aaseq>

Gene Sequence

<dnaseqindica>1..740#3020..3096#3186..3313#5383..5450#5584..5690#5779..5864#5978..6130#6268..6345#6449..6514#6800..7090#ATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTACACATATGCTGTTCCATTATGTGCTTAAATTTTTGCTGCTCATGTGAAAGAACTTATGCTTGCTGCACCTGTCGATTGTGAACTTATGAGTTATTATCACTATTGTAAAGAATTTGGTTCATGCTTTCAATACAAATTGGAGAGAATGGTCTTCCCTGTGCAGCTGTGCTAGGTACTTGTCAAATTGTTTGCATAAGCTTTGCTATTATGGAAACATTGAGTGTGCTGGACTCCTATACCTGAATTTAGGTGGTGAATAGACGGAATCGTACCTCCCGGCTTCTATTTATAAGCCTTATAAGCCTATAAGGGGAGTAAGCACCACATTTAACATGACTTCCCTTCGATAAATGCGAAGAAACCAATAAACATGTTAGGTGACTCGCTGGTTTATTCTTGTCTATTTTTGTGTGCTTTGAAACCGATTATTCGTTCTCCTGTTTATCAATGGTAATGCAACCTGAATATGTTCTATGGACACCGTCCAAAAGTCTTGAATACTTTACTACTGGATATTCTAACCTTATGCAATTGCAAAGGGATTCACACGGGGAGGGCACAAGGTGGAAGTCTTCTTACTATGGATCAGTTTGCAACTTTGCATTTCATAGAATATTGAAATGGTGGTTCCTTTGTTCATCTGTCGATGAAATTTAGATGATTTTTGAAGTTGTTTTTGTTGATCGATATTTCATAAACTGGAAGCTCTTCTGTTAGTTTTTCAGTGAGATTTAGATGAATAGGCTTCTCAAATGTTTAAGCTCAATAATCAAGACCGTACATGCTGATGCTAAGTTCACATATGCTTTCCATTTTTCAATCTACAAGTTTGCATAAAACATCGCTTTTCCATAAGCTATAAATGGGATCAGACATCTTCTGTTCAGAGATCATTGCACAATAAGGCTCTGTTTCTCTGCCCATCAAGAGAGTTATGTAGCGTACAGTAGAGAGAAGCAGAATAGCAGCATACATGCCTCCTATAGAACAAGTTGGCTTGTTAGGATTTATGGAGAAATTCCCATTTGAAGTACAGTAGATATATCTATTGAATAGTAGTTATTTCTGAAATGAACCATATAGTCTTGATAGGGCTGACAAGTTACCTTGTCAGTTGTATTTGGGTGAGGTGTTGCACATGAAAACTTGTTAGAGGCCTACCTCATATTTGGGAGCTGAGTTTTTCGTACCTTTTTCCTTTGTCATTAGCATACTTTCATAGGTGTCAAGTGGAATGTGAGATAAATCCTTTTTCACTAAAACATTATGAAGGTGTGCCTTTGGGATAGGAGTTTTGTGAATACTGGAAACTTATTAATTATATCAAACTGTTCCTGCCACATAGATCTCTCATCTCTGATTCTTCTGGTGCTATCAGCCAAATGTAAGCTTTATAGAATGGTTTGAATGACATTGAGTTCATCTGCCGTTTTCTGCTTACTTTACTTCCATCAAATAGAGTTTTCAGTAGGTTTGAATCCTCAAGTGGTTGATACAATAGCCACTATAGTTAATGTGGGGCATGTGTCTTCTGTCATTTAGCACTGTTTGAGTCACTTGCATCCTTAGACATTATTATTGGCACTTCTAAAACAAATTGGACTGCAACAGCACTAGTTTTGTCCACTGATGAATCGATCTTTGTGATGAACACAAACTGAGTCAAAGTTGTTTTACTTTTTCTTAATATTGAGCCATGACTTTGAAACAGTTGCTGCATAGATTTCAGATAAAAGCTGCGAACACTGGTACTGGGACTTATCGGCAGGAACTATTCTAGATTGCAAAGACGGCAGGCAGGAGTGAAGACAAGCTTTTGCGTAAAGCTGGCCGCATAGCATCTAATAAATCAAATCATGGTGATCGCATCAAACAAACATGAGTTAATGAAATATTTATCTCTGACATTAGAAAGGTAGAGCCCTCTTTTATTGGAATAACCTCTTCCCCTAGAATTTACTGGGTTTTTTTTTTCCCATTGCATTCACAGGCATCGGTAAGTTTGCTCCATGCATCTATTTCTTGTTTAGTTGTGTTACATGTGTTGTTTGTTCAGACTTCAGAAACAGCAGTTATGTAGATGGATACGCCATGATGATCTGGACATGCTAACCGATGAGCTAGAAAGGAAACGTGTGTTTGACAATCTAGTCGGCTGTGAAATAATACTCGGCCGTTCGAACTGACCCAATTTTCTAACACCCAACCCCAAAATGATGCAGGATACCGAACATTGATACTCATGGCTGACACATTTCTGGCTAACGATTTGCGTCAGTTTCCCTCTGCTAAACGTAAAGCTTCTCTTTATACGTCAACACTTGCAAACATTTTCATCTTGATGTTGAAGGTGATTTGCATCTTTTAATCATCCCAACCTCTCCTTCAGGGTTCTACTGGCATTCAGTTATTATCATTATTTTCTGGTTACATGAAAGACGACGTGTCATCAGCTGTTGAGACTCAGCTTGCAGAATCTTGTCGCCTCGAGAGTGGTACACATTTTAGATGATGCAAACACCCCTGAGAAATCAAGAAGCATTGCAGGCAGCTGATTGCGATGCAAAGGTTAAACAATTGGCCGGCCATAAGCCCTCCCTAAGAGCAAGGCTAATAGCAAAGCTTTTTGACGGCGATAACATATGTCCATGTCATCTAGAGTTGATGATTGTAGATTGCTTATACAAAGGACAAACTATAAGTTGGCTTTATATAAGCGTGAATTGGACTTAATTATTATATGCAAAGATGAACAAAACCAAGCTCTATATCTATGGTCCACCGTGCTTGAGCTGTTGAGCATAAAACTATCGTATATTGGGAGCTGCACGCTATGCATGGCCATAAAAGATCAAATAAACTGAACCGGAGGCCCACAAACCATATAAAATGTTTAATATGGCCTAAATTATTGTGCTACCACCCGGCGCTTCAGCAAGCACTCGCTCTCTTCGTTTTCATGTTTTCTCCCTCCTCCACGTAATACAACGATGATGTGGATGTTGTTATCACCGACTGAAGAAGTGCTATTATACCTGCTCTAACGGTGTTTGGTTCATCGGTCATTTTTGTCTATTTACTTAATCATTATCTTGAGCTTGAACTGATCCTGACATGTTAAACAAAACCAATGAGGGATCGAGCAATGGTCAACCAGATTCAGAGTTCCAGACCAGCATCGTCCTACCTGACACTCGTTGCCACGTGGCAGGGAGAGGGAGAGACAAGAGCCTAATCCAAAAAACATCTCTTTTTTTCCTCTCTCACTGCTGCAACGATCCTGCCACAGCCGGTGCAGCAAGACGCCAGCAACTGATCAGTAAAATACTAACAGACAGTAACGCAGTTTGCAGCAGTGCAAATCTCTCTCAGAAAAAAAAATACTGATGTGATTATCATTATTAGAGGTTGTAGTAGTAATAAAGTGCTAGTACTAATCAGCTACTAATCATATCTGCATGTAAAAAGAAGTCAAGGCGAAACGGCCATGAGAGGCCGGAGCTGAACTTATTTAATTTTTGTGAGAAGTGGCAGGCCCTCCTATTAATGGTGGCCAATCGATCCGCCCAGTTTTCCCGTGTGCTCCTCTGAAATTTCTCGGCATGCTTGTGATCTCTTCCCATCTCATGTGTTTGATTTGGCAAAGCTTGGAGGTTATAATTAGCAGCAGCCTGAGTTAAAACGGCAGCATCTGAGAGGAGAGGAGAGGGAGGCCAAGCAAACGACGCAATTAAGCGCTCTGCTTACGCCACACACGTAGCAGCAGAGGAGTATTTAGCAGCCATTGCTATGCCTTCTCTGCCGTAGCGTCGACATTGCTCTTGCGATCTAGTGCCTGCCTGTGCCTGCATCCTCCCATTGTAAGAACTTTTGCCGGTTTATGTTCTACTTTGTTTGGGCCATCTGCATGGCAAGAGAATTCAGTAGAAAGACACGAGCTTGGTTGTTCTTGTTCGTGTCAAACCTGTGAGCTTGATAGCTGCTTCTGTTTCTTTCTGTGATTTCTGGATCTTGTGGTGTATTCTGGGATTTTAAAGATGGGCAGGTCTTAGTTTATTGGATTGATTGTGATGAATTGTGTGTCTCTGAAAAATAATACAAATTCATCCAGAAGAGCTTGACTCTGTTCTGGTTGTTCTTTTAACTTTTGAGCAATGGGTCTTCTCTGTTTCTTGTCTACTCTAAACTACTATTGATTCTTTTTCCTCTTAACTGCAACTGAACGTTGTGAACTTGTGATCTTTACTGTAATTCTCTAGGTGTTGAAACCTGCAGGCTTCTGGTGCTGAGAGCATAATCATAGATAATGTGGAACTACTCTGCACCATCGTCTCTGCTCATACCGTTCACTGACGACTACGGTAAATTTCCCAACTGCCATGACATTTTATTTTCTTCTCTGTCGAATTTATTTAACAGGTTTCTTCAGTTGCAGTGAAATGCGAAGCGTCTAATTCACCTTCCACAACTGTAGGCTTTGACAGAATGTAAGTGTTGGATTCGGTAGTGAGGGCCTTCAAATGATCTTTCAATTCAATATCTTTTTTTAGATAGTGGAAATGGTATACGATCTTTCAATTCGCATGAAACCACTGAAAATTTCTTCGTCTCTTTGGTCAGGATCGCCGCGGACTATGACCTGTTCCATCACATGAGCTTCTCGCCGTCGCTTCAGAATCTTCAGTCACCAACGTTTTTCACCACGAGAAGTTCAGAGAGCTACTTGGGTAACTCCACTCTTTCGAAATGCTTTCTGCGTGGATGGTGAGATTGTTTTACTTTGATACTATTTTTCTGATGAACTGATAACAACAGGAGAGAGCTCGATCTATGGCGGAGGCGCCAGGCCTGCACTCGCGCAGTTCAGCTATTCCCAGCCAATTGCTGCTACTTCTGCTGCTGTATGTAATAATCCTCTTCGCCTACCTGAAACCTTGTGATAATATCATCAAGCCAGTGAAGTTTGTGTTATTAATTTTTACATGGTTTGGGAAATGCTTGTTTATGTCGTCAGCATTTGGTGAGATGGACGGCGGCCGGGGAGCCGATGACCGGCGACGGCGGTTTCAGGAGCTCCAAGAGGCTCAAGACAGCAACTACGGCGACGACACAACCTCCAAGGCATGGGGTGAAGTGCCATGCAAAGCCAAGAAATCAAACTACGAAGGTAGTATCATTTTTGAGTATCTGATAGTGAAACAATTACAGTTCTTGTAATCATCACTTCATCAGTGTTGTCAGTGTAGGGGCTTTCTCTCGTTCATATTGGCTATCTTTTCCCTCTCACTGCCATCGTAAATGCAGGCAACATGTAAGAAGAGGAGCCAGAAACTGGGCGACAGAATCACAGCTCTGCAGCAGTTAGTTTCACCTTACGGCAAGGTTAATTAATCAACGACCTAGCTAGTGTTTTCTATCCATGTTAATCATCAGTGATTTTGCTGATCTGAGAGCGTTAATTTTCTGAACGTGATCGTCCGAGCAGACAGACACCGCATCGGTGCTCCACGAAGCAGCCGCCTGCATACGGCAACTCCACCAACAAATCCAGGTAATCGCGCGTCAGACATCGTAGCCAGGCACGACGAGTCCATGACCAAGGTTTACAAAACCTTACGAGTTTTTAAAATCACGATAAACCTCGTGGTAATAGTACAATTTTCATGATAATCACGTGGTTACCATAATAACCGTTTTACCGTAAAATGATGATAACCCCACCCAAAATAATTTGGTGAACCCTGGCATCTGCAACCCAATGGACTAAGTCGTTTTCGCGTGTTTCACATGATAAAAAAAGCCTGCAGAATCTCAGTGTTTTTCACTTCCTCTTCAGATTCTGACAGCGCCTTACCCTGGAACAAGCTCCTCCTCTGCATCGTCGCAGCAGCAGGTCGTATTTTCTGTTCTTGAAAGTTGCAGCCATGTCATGTCCTTCTTTACTGCAATTGCAACAGTTTTGTGGCTGCAGGATGCCGGAGGAGGAGGAGGCACGGCGACGGAGCTTCGCCGGCGAGGCCTGTGCGTGGCGGCGCTGTCGCCGGCCGTCGTGAGCCTCGCGGCAGAGGGCGGTCGCCGCCGCACGGACGTCGAGGATCAGAAGAGGATCTGGTTCAGTAATCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010988